RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 UTP14CQ5TAP6 766 aaKnown RBP17.39■□□□□ 0.37
TRIM47-206ENST00000592942 GDF6Q6KF10 455 aaPredicted RBP17.39■□□□□ 0.37
TRIM47-206ENST00000592942 MOXD1Q6UVY6 613 aa17.39■□□□□ 0.37
TRIM47-206ENST00000592942 TRIM50Q86XT4 487 aa17.39■□□□□ 0.37
TRIM47-206ENST00000592942 DIS3L2Q8IYB7 885 aaKnown RBP17.39■□□□□ 0.37
TRIM47-206ENST00000592942 GJA10Q969M2 543 aa17.39■□□□□ 0.37
TRIM47-206ENST00000592942 GTF2IRD1Q9UHL9 959 aa17.39■□□□□ 0.37
TRIM47-206ENST00000592942 IGKV6D-21A0A0A0MT36 114 aa17.38■□□□□ 0.37
TRIM47-206ENST00000592942 CCDC194A0A1B0GVG4 234 aa17.38■□□□□ 0.37
TRIM47-206ENST00000592942 TIMP1P01033 207 aa17.38■□□□□ 0.37
TRIM47-206ENST00000592942 HOXC8P31273 242 aa17.38■□□□□ 0.37
TRIM47-206ENST00000592942 BMP8BP34820 402 aa17.38■□□□□ 0.37
TRIM47-206ENST00000592942 CHMP4BP1P59074 171 aa17.38■□□□□ 0.37
TRIM47-206ENST00000592942 ACTR2P61160 394 aa17.38■□□□□ 0.37
TRIM47-206ENST00000592942 SETQ01105 290 aaPredicted RBP17.38■□□□□ 0.37
TRIM47-206ENST00000592942 CUL4AQ13619 759 aa17.38■□□□□ 0.37
TRIM47-206ENST00000592942 FAM47CQ5HY64 1035 aa17.38■□□□□ 0.37
TRIM47-206ENST00000592942 ABHD15Q6UXT9 468 aa17.38■□□□□ 0.37
TRIM47-206ENST00000592942 CHRDL2Q6WN34 429 aa17.38■□□□□ 0.37
TRIM47-206ENST00000592942 SLC5A5Q92911 643 aa17.38■□□□□ 0.37
TRIM47-206ENST00000592942 BADQ92934 168 aa17.38■□□□□ 0.37
TRIM47-206ENST00000592942 C8orf76Q96K31 380 aa17.38■□□□□ 0.37
TRIM47-206ENST00000592942 SDF4Q9BRK5 362 aa17.38■□□□□ 0.37
TRIM47-206ENST00000592942 ZNF577Q9BSK1 485 aa17.38■□□□□ 0.37
TRIM47-206ENST00000592942 KATNAL1Q9BW62 490 aa17.38■□□□□ 0.37
TRIM47-206ENST00000592942 RNPEPQ9H4A4 650 aa17.38■□□□□ 0.37
TRIM47-206ENST00000592942 WNT7AO00755 349 aa17.37■□□□□ 0.37
TRIM47-206ENST00000592942 TLR3O15455 904 aaKnown RBP17.37■□□□□ 0.37
TRIM47-206ENST00000592942 SLC37A4O43826 429 aa17.37■□□□□ 0.37
TRIM47-206ENST00000592942 CYP2C9P11712 490 aa17.37■□□□□ 0.37
TRIM47-206ENST00000592942 ZNF200P98182 395 aaPredicted RBP17.37■□□□□ 0.37
TRIM47-206ENST00000592942 LETM2Q2VYF4 491 aa17.37■□□□□ 0.37
TRIM47-206ENST00000592942 PPP4R3AQ6IN85 833 aa17.37■□□□□ 0.37
TRIM47-206ENST00000592942 NEK8Q86SG6 692 aa17.37■□□□□ 0.37
TRIM47-206ENST00000592942 ETNPPLQ8TBG4 499 aa17.37■□□□□ 0.37
TRIM47-206ENST00000592942 TBC1D22BQ9NU19 505 aa17.37■□□□□ 0.37
TRIM47-206ENST00000592942 PRKAG2Q9UGJ0 569 aa17.37■□□□□ 0.37
TRIM47-206ENST00000592942 UMODL1Q5DID0 1318 aa17.37■□□□□ 0.37
TRIM47-206ENST00000592942 LTBP2Q14767 1821 aa17.36■□□□□ 0.37
TRIM47-206ENST00000592942 DDX39AO00148 427 aaKnown RBP17.36■□□□□ 0.37
TRIM47-206ENST00000592942 PSMD10O75832 226 aa17.36■□□□□ 0.37
TRIM47-206ENST00000592942 RAG1P15918 1043 aa17.36■□□□□ 0.37
TRIM47-206ENST00000592942 ADAM17P78536 824 aa17.36■□□□□ 0.37
TRIM47-206ENST00000592942 TRIM29Q14134 588 aa17.36■□□□□ 0.37
TRIM47-206ENST00000592942 B3GNT9Q6UX72 402 aa17.36■□□□□ 0.37
TRIM47-206ENST00000592942 FAM184AQ8NB25 1140 aa17.36■□□□□ 0.37
TRIM47-206ENST00000592942 VWCEQ96DN2 955 aa17.36■□□□□ 0.37
TRIM47-206ENST00000592942 NOC4LQ9BVI4 516 aaKnown RBP17.36■□□□□ 0.37
TRIM47-206ENST00000592942 SUPT20HL2P0C7V6 817 aa17.35■□□□□ 0.37
TRIM47-206ENST00000592942 SMIM10L2AP0DMW4 78 aa17.35■□□□□ 0.37
TRIM47-206ENST00000592942 SMIM10L2BP0DMW5 78 aa17.35■□□□□ 0.37
TRIM47-206ENST00000592942 CYP2C18P33260 490 aa17.35■□□□□ 0.37
TRIM47-206ENST00000592942 EPHB4P54760 987 aa17.35■□□□□ 0.37
TRIM47-206ENST00000592942 PTGISQ16647 500 aa17.35■□□□□ 0.37
TRIM47-206ENST00000592942 C7orf31Q8N865 590 aa17.35■□□□□ 0.37
TRIM47-206ENST00000592942 DHX38Q92620 1227 aaKnown RBP17.35■□□□□ 0.37
TRIM47-206ENST00000592942 HAS1Q92839 578 aa17.35■□□□□ 0.37
TRIM47-206ENST00000592942 RIT2Q99578 217 aa17.35■□□□□ 0.37
TRIM47-206ENST00000592942 SMARCAD1Q9H4L7 1026 aa17.35■□□□□ 0.37
TRIM47-206ENST00000592942 BRMS1Q9HCU9 246 aa17.35■□□□□ 0.37
TRIM47-206ENST00000592942 KCNMB3Q9NPA1 279 aa17.35■□□□□ 0.37
TRIM47-206ENST00000592942 DDX25Q9UHL0 483 aaKnown RBP17.35■□□□□ 0.37
TRIM47-206ENST00000592942 TRIP12Q14669 1992 aaPredicted RBP17.35■□□□□ 0.37
TRIM47-206ENST00000592942 KIF28PB7ZC32 967 aa17.34■□□□□ 0.37
TRIM47-206ENST00000592942 ATP4AP20648 1035 aa17.34■□□□□ 0.37
TRIM47-206ENST00000592942 GJB2P29033 226 aa17.34■□□□□ 0.37
TRIM47-206ENST00000592942 MFSD5Q6N075 450 aa17.34■□□□□ 0.37
TRIM47-206ENST00000592942 ZNF746Q6NUN9 644 aaPredicted RBP17.34■□□□□ 0.37
TRIM47-206ENST00000592942 C16orf59Q7L2K0 433 aa17.34■□□□□ 0.37
TRIM47-206ENST00000592942 PLPPR4Q7Z2D5 763 aa17.34■□□□□ 0.37
TRIM47-206ENST00000592942 EMSYQ7Z589 1322 aa17.34■□□□□ 0.37
TRIM47-206ENST00000592942 WNT8BQ93098 351 aa17.34■□□□□ 0.37
TRIM47-206ENST00000592942 LBHD1Q9BQE6 289 aaPredicted RBP17.34■□□□□ 0.37
TRIM47-206ENST00000592942 PPP1R12CQ9BZL4 782 aa17.34■□□□□ 0.37
TRIM47-206ENST00000592942 WNT8AQ9H1J5 351 aa17.34■□□□□ 0.37
TRIM47-206ENST00000592942 FOXP1Q9H334 677 aaPredicted RBP17.34■□□□□ 0.37
TRIM47-206ENST00000592942 HIPK3Q9H422 1215 aa17.34■□□□□ 0.37
TRIM47-206ENST00000592942 CCNT1O60563 726 aaKnown RBP17.33■□□□□ 0.36
TRIM47-206ENST00000592942 GCFC2P16383 781 aaKnown RBP17.33■□□□□ 0.36
TRIM47-206ENST00000592942 U2AF2P26368 475 aaKnown RBP eCLIP17.33■□□□□ 0.36
TRIM47-206ENST00000592942 STAT5BP51692 787 aa17.33■□□□□ 0.36
TRIM47-206ENST00000592942 TRIM71Q2Q1W2 868 aaKnown RBP17.33■□□□□ 0.36
TRIM47-206ENST00000592942 CCDC60Q8IWA6 550 aaPredicted RBP17.33■□□□□ 0.36
TRIM47-206ENST00000592942 AFAP1L1Q8TED9 768 aa17.33■□□□□ 0.36
TRIM47-206ENST00000592942 GLG1Q92896 1179 aa17.33■□□□□ 0.36
TRIM47-206ENST00000592942 SNX21Q969T3 373 aa17.33■□□□□ 0.36
TRIM47-206ENST00000592942 UNC45AQ9H3U1 944 aa17.33■□□□□ 0.36
TRIM47-206ENST00000592942 SETD4Q9NVD3 440 aa17.33■□□□□ 0.36
TRIM47-206ENST00000592942 ERAP1Q9NZ08 941 aa17.33■□□□□ 0.36
TRIM47-206ENST00000592942 RBAK-RBAKDNI3L0D1 243 aa17.32■□□□□ 0.36
TRIM47-206ENST00000592942 TREHO43280 583 aa17.32■□□□□ 0.36
TRIM47-206ENST00000592942 MARK3P27448 753 aa17.32■□□□□ 0.36
TRIM47-206ENST00000592942 KRT76Q01546 638 aa17.32■□□□□ 0.36
TRIM47-206ENST00000592942 GPNMBQ14956 572 aa17.32■□□□□ 0.36
TRIM47-206ENST00000592942 PLCB4Q15147 1175 aa17.32■□□□□ 0.36
TRIM47-206ENST00000592942 SAFBQ15424 915 aaKnown RBP eCLIP17.32■□□□□ 0.36
TRIM47-206ENST00000592942 MARCH8Q5T0T0 291 aa17.32■□□□□ 0.36
TRIM47-206ENST00000592942 LRCH2Q5VUJ6 765 aa17.32■□□□□ 0.36
TRIM47-206ENST00000592942 SWSAP1Q6NVH7 229 aa17.32■□□□□ 0.36
TRIM47-206ENST00000592942 SMAP1Q8IYB5 467 aaPredicted RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms