RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 STK10O94804 968 aaKnown RBP13.82□□□□□ -0.2
DNMT1-228ENST00000592705 LIG4P49917 911 aa13.82□□□□□ -0.2
DNMT1-228ENST00000592705 MYL7Q01449 175 aa13.82□□□□□ -0.2
DNMT1-228ENST00000592705 MIS18BP1Q6P0N0 1132 aa13.82□□□□□ -0.2
DNMT1-228ENST00000592705 TMED8Q6PL24 325 aaPredicted RBP13.82□□□□□ -0.2
DNMT1-228ENST00000592705 MED10Q9BTT4 135 aa13.82□□□□□ -0.2
DNMT1-228ENST00000592705 APOL6Q9BWW8 343 aa13.82□□□□□ -0.2
DNMT1-228ENST00000592705 PPRC1Q5VV67 1664 aaKnown RBP13.82□□□□□ -0.2
DNMT1-228ENST00000592705 LRRIQ4A6NIV6 560 aa13.82□□□□□ -0.2
DNMT1-228ENST00000592705 SLC8A1P32418 973 aa13.82□□□□□ -0.2
DNMT1-228ENST00000592705 SESTD1Q86VW0 696 aa13.82□□□□□ -0.2
DNMT1-228ENST00000592705 KCNF1Q9H3M0 494 aa13.82□□□□□ -0.2
DNMT1-228ENST00000592705 ELP3Q9H9T3 547 aa13.82□□□□□ -0.2
DNMT1-228ENST00000592705 MYO3AQ8NEV4 1616 aa13.82□□□□□ -0.2
DNMT1-228ENST00000592705 GH2P01242 217 aa13.82□□□□□ -0.2
DNMT1-228ENST00000592705 TROVE2P10155 538 aaKnown RBP eCLIP13.82□□□□□ -0.2
DNMT1-228ENST00000592705 CCDC13Q8IYE1 715 aa13.82□□□□□ -0.2
DNMT1-228ENST00000592705 WHAMMQ8TF30 809 aa13.82□□□□□ -0.2
DNMT1-228ENST00000592705 C1orf112Q9NSG2 853 aa13.82□□□□□ -0.2
DNMT1-228ENST00000592705 MORC2Q9Y6X9 1032 aaPredicted RBP13.82□□□□□ -0.2
DNMT1-228ENST00000592705 LGALS16A8MUM7 142 aa13.82□□□□□ -0.2
DNMT1-228ENST00000592705 TNNC2P02585 160 aa13.82□□□□□ -0.2
DNMT1-228ENST00000592705 KCNJ6P48051 423 aa13.82□□□□□ -0.2
DNMT1-228ENST00000592705 CUL4BQ13620 913 aa13.82□□□□□ -0.2
DNMT1-228ENST00000592705 TTC19Q6DKK2 380 aaPredicted RBP13.82□□□□□ -0.2
DNMT1-228ENST00000592705 A0A087WUV0 522 aaPredicted RBP13.81□□□□□ -0.2
DNMT1-228ENST00000592705 CYP2D7A0A087X1C5 515 aa13.81□□□□□ -0.2
DNMT1-228ENST00000592705 PHBP35232 272 aa13.81□□□□□ -0.2
DNMT1-228ENST00000592705 CACNB3P54284 484 aa13.81□□□□□ -0.2
DNMT1-228ENST00000592705 METTL23Q86XA0 190 aa13.81□□□□□ -0.2
DNMT1-228ENST00000592705 MAN1A1P33908 653 aa13.81□□□□□ -0.2
DNMT1-228ENST00000592705 MECOMQ03112 1051 aa13.81□□□□□ -0.2
DNMT1-228ENST00000592705 EMBQ6PCB8 327 aa13.81□□□□□ -0.2
DNMT1-228ENST00000592705 RBM46Q8TBY0 533 aaKnown RBP13.81□□□□□ -0.2
DNMT1-228ENST00000592705 GGA3Q9NZ52 723 aa13.81□□□□□ -0.2
DNMT1-228ENST00000592705 THAP12O43422 761 aa13.81□□□□□ -0.2
DNMT1-228ENST00000592705 FCER1AP12319 257 aa13.81□□□□□ -0.2
DNMT1-228ENST00000592705 RABL6Q3YEC7 729 aaPredicted RBP13.81□□□□□ -0.2
DNMT1-228ENST00000592705 SYDE2Q5VT97 1194 aa13.81□□□□□ -0.2
DNMT1-228ENST00000592705 ANKRD20A3Q5VUR7 823 aa13.81□□□□□ -0.2
DNMT1-228ENST00000592705 ARMCX5Q6P1M9 558 aa13.81□□□□□ -0.2
DNMT1-228ENST00000592705 ATF2P15336 505 aa13.81□□□□□ -0.2
DNMT1-228ENST00000592705 CDC27P30260 824 aa13.81□□□□□ -0.2
DNMT1-228ENST00000592705 CYP4A11Q02928 519 aa13.81□□□□□ -0.2
DNMT1-228ENST00000592705 ADAT2Q7Z6V5 191 aaKnown RBP13.81□□□□□ -0.2
DNMT1-228ENST00000592705 SGMS1Q86VZ5 419 aa13.81□□□□□ -0.2
DNMT1-228ENST00000592705 VPS52Q8N1B4 723 aa13.81□□□□□ -0.2
DNMT1-228ENST00000592705 RNF10Q8N5U6 811 aaKnown RBP13.81□□□□□ -0.2
DNMT1-228ENST00000592705 MINPP1Q9UNW1 487 aa13.81□□□□□ -0.2
DNMT1-228ENST00000592705 UBN2Q6ZU65 1347 aa13.8□□□□□ -0.2
DNMT1-228ENST00000592705 ANO9A1A5B4 782 aa13.8□□□□□ -0.2
DNMT1-228ENST00000592705 TYW5A2RUC4 315 aaKnown RBP13.8□□□□□ -0.2
DNMT1-228ENST00000592705 CYP27A1Q02318 531 aa13.8□□□□□ -0.2
DNMT1-228ENST00000592705 NFX1Q12986 1120 aaKnown RBP13.8□□□□□ -0.2
DNMT1-228ENST00000592705 PFKFB3Q16875 520 aaPredicted RBP13.8□□□□□ -0.2
DNMT1-228ENST00000592705 PRR5LQ6MZQ0 368 aa13.8□□□□□ -0.2
DNMT1-228ENST00000592705 PPM1KQ8N3J5 372 aa13.8□□□□□ -0.2
DNMT1-228ENST00000592705 FAM133AQ8N9E0 248 aa13.8□□□□□ -0.2
DNMT1-228ENST00000592705 SLC17A8Q8NDX2 589 aa13.8□□□□□ -0.2
DNMT1-228ENST00000592705 DAAM1Q9Y4D1 1078 aa13.8□□□□□ -0.2
DNMT1-228ENST00000592705 NNTQ13423 1086 aa13.8□□□□□ -0.2
DNMT1-228ENST00000592705 IQCB1Q15051 598 aa13.8□□□□□ -0.2
DNMT1-228ENST00000592705 STOX1Q6ZVD7 989 aa13.8□□□□□ -0.2
DNMT1-228ENST00000592705 FAM186BQ8IYM0 893 aa13.8□□□□□ -0.2
DNMT1-228ENST00000592705 EMILIN3Q9NT22 766 aa13.8□□□□□ -0.2
DNMT1-228ENST00000592705 GDAQ9Y2T3 454 aa13.8□□□□□ -0.2
DNMT1-228ENST00000592705 ABCA9Q8IUA7 1624 aa13.8□□□□□ -0.2
DNMT1-228ENST00000592705 CXCR5P32302 372 aa13.8□□□□□ -0.2
DNMT1-228ENST00000592705 MFAP3P55082 362 aa13.8□□□□□ -0.2
DNMT1-228ENST00000592705 FOXO4P98177 505 aa13.8□□□□□ -0.2
DNMT1-228ENST00000592705 SF3A3Q12874 501 aaKnown RBP eCLIP13.8□□□□□ -0.23e-6■■■■■ 28.3
DNMT1-228ENST00000592705 GLE1Q53GS7 698 aaKnown RBP13.8□□□□□ -0.2
DNMT1-228ENST00000592705 SHC4Q6S5L8 630 aa13.8□□□□□ -0.2
DNMT1-228ENST00000592705 PPP4R3CPQ6ZMV5 832 aa13.8□□□□□ -0.2
DNMT1-228ENST00000592705 INO80B-WBP1J3KQ70 363 aa13.8□□□□□ -0.2
DNMT1-228ENST00000592705 FTCDO95954 541 aa13.8□□□□□ -0.2
DNMT1-228ENST00000592705 GMPSP49915 693 aaPredicted RBP13.8□□□□□ -0.2
DNMT1-228ENST00000592705 C1orf228Q6PIY5 440 aa13.8□□□□□ -0.2
DNMT1-228ENST00000592705 CELF1Q92879 486 aaKnown RBP13.8□□□□□ -0.2
DNMT1-228ENST00000592705 INO80BQ9C086 356 aaPredicted RBP13.8□□□□□ -0.2
DNMT1-228ENST00000592705 HSPA6P17066 643 aa13.79□□□□□ -0.2
DNMT1-228ENST00000592705 NAA35Q5VZE5 725 aa13.79□□□□□ -0.2
DNMT1-228ENST00000592705 CCDC197Q8NCU1 140 aa13.79□□□□□ -0.2
DNMT1-228ENST00000592705 PRR29P0C7W0 189 aa13.79□□□□□ -0.2
DNMT1-228ENST00000592705 CETPP11597 493 aa13.79□□□□□ -0.2
DNMT1-228ENST00000592705 HNRNPH2P55795 449 aaKnown RBP13.79□□□□□ -0.2
DNMT1-228ENST00000592705 RSAD2Q8WXG1 361 aa13.79□□□□□ -0.2
DNMT1-228ENST00000592705 SEMA3FQ13275 785 aa13.79□□□□□ -0.2
DNMT1-228ENST00000592705 SNCBQ16143 134 aa13.79□□□□□ -0.2
DNMT1-228ENST00000592705 ANGEL2Q5VTE6 544 aaKnown RBP13.79□□□□□ -0.2
DNMT1-228ENST00000592705 KCTD1Q719H9 257 aa13.79□□□□□ -0.2
DNMT1-228ENST00000592705 PALM2Q8IXS6 379 aa13.79□□□□□ -0.2
DNMT1-228ENST00000592705 GTF3C2Q8WUA4 911 aaPredicted RBP13.79□□□□□ -0.2
DNMT1-228ENST00000592705 MAGOHBQ96A72 148 aaKnown RBP13.79□□□□□ -0.2
DNMT1-228ENST00000592705 VCXQ9H320 206 aa13.79□□□□□ -0.2
DNMT1-228ENST00000592705 INTS9Q9NV88 658 aaKnown RBP13.79□□□□□ -0.2
DNMT1-228ENST00000592705 SEPT9Q9UHD8 586 aaPredicted RBP13.79□□□□□ -0.2
DNMT1-228ENST00000592705 ADGRG1Q9Y653 693 aa13.79□□□□□ -0.2
DNMT1-228ENST00000592705 LRCH2Q5VUJ6 765 aa13.79□□□□□ -0.2
DNMT1-228ENST00000592705 CNOT10Q9H9A5 744 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms