RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 WFDC3Q8IUB2 231 aa8.34□□□□□ -1.07
VMP1-215ENST00000592619 ZNF610Q8N9Z0 462 aa8.34□□□□□ -1.07
VMP1-215ENST00000592619 CCDC120Q96HB5 630 aa8.34□□□□□ -1.07
VMP1-215ENST00000592619 FUBP3Q96I24 572 aaKnown RBP eCLIP8.34□□□□□ -1.07
VMP1-215ENST00000592619 RTFDC1Q9BY42 306 aaPredicted RBP8.34□□□□□ -1.07
VMP1-215ENST00000592619 TCF7L1Q9HCS4 588 aa8.34□□□□□ -1.07
VMP1-215ENST00000592619 ACSS2Q9NR19 701 aa8.34□□□□□ -1.07
VMP1-215ENST00000592619 SLC52A1Q9NWF4 448 aa8.34□□□□□ -1.07
VMP1-215ENST00000592619 FBLN5Q9UBX5 448 aa8.34□□□□□ -1.07
VMP1-215ENST00000592619 TAF6LQ9Y6J9 622 aa8.34□□□□□ -1.07
VMP1-215ENST00000592619 BAZ1BQ9UIG0 1483 aaKnown RBP8.33□□□□□ -1.08
VMP1-215ENST00000592619 CCDC194A0A1B0GVG4 234 aa8.33□□□□□ -1.08
VMP1-215ENST00000592619 A0A1W2PQ27 194 aa8.33□□□□□ -1.08
VMP1-215ENST00000592619 A0A1W2PQ64 194 aa8.33□□□□□ -1.08
VMP1-215ENST00000592619 A0A1W2PQC6 194 aa8.33□□□□□ -1.08
VMP1-215ENST00000592619 A0A1W2PQD8 194 aa8.33□□□□□ -1.08
VMP1-215ENST00000592619 NOTOA8MTQ0 251 aa8.33□□□□□ -1.08
VMP1-215ENST00000592619 CYP17A1P05093 508 aa8.33□□□□□ -1.08
VMP1-215ENST00000592619 EPHA5P54756 1037 aa8.33□□□□□ -1.08
VMP1-215ENST00000592619 LRRC32Q14392 662 aa8.33□□□□□ -1.08
VMP1-215ENST00000592619 NR0B2Q15466 257 aa8.33□□□□□ -1.08
VMP1-215ENST00000592619 PTPN21Q16825 1174 aa8.33□□□□□ -1.08
VMP1-215ENST00000592619 ABCB5Q2M3G0 1257 aa8.33□□□□□ -1.08
VMP1-215ENST00000592619 NXNQ6DKJ4 435 aa8.33□□□□□ -1.08
VMP1-215ENST00000592619 CC2D1AQ6P1N0 951 aaPredicted RBP8.33□□□□□ -1.08
VMP1-215ENST00000592619 EP400NLQ6ZTU2 488 aa8.33□□□□□ -1.08
VMP1-215ENST00000592619 SPRED2Q7Z698 418 aa8.33□□□□□ -1.08
VMP1-215ENST00000592619 WDR75Q8IWA0 830 aaKnown RBP8.33□□□□□ -1.08
VMP1-215ENST00000592619 MYO1HQ8N1T3 1032 aa8.33□□□□□ -1.08
VMP1-215ENST00000592619 OXR1Q8N573 874 aa8.33□□□□□ -1.08
VMP1-215ENST00000592619 POLR3GLQ9BT43 218 aa8.33□□□□□ -1.08
VMP1-215ENST00000592619 PCIF1Q9H4Z3 704 aa8.33□□□□□ -1.08
VMP1-215ENST00000592619 BCCIPQ9P287 314 aaKnown RBP eCLIP8.33□□□□□ -1.08
VMP1-215ENST00000592619 WASHC2AQ641Q2 1341 aa8.32□□□□□ -1.08
VMP1-215ENST00000592619 FITM1A5D6W6 292 aa8.32□□□□□ -1.08
VMP1-215ENST00000592619 FZD9O00144 591 aa8.32□□□□□ -1.08
VMP1-215ENST00000592619 TADA3O75528 432 aa8.32□□□□□ -1.08
VMP1-215ENST00000592619 CFBP00751 764 aa8.32□□□□□ -1.08
VMP1-215ENST00000592619 MSL3P1P0C860 447 aa8.32□□□□□ -1.08
VMP1-215ENST00000592619 MYBL2P10244 700 aa8.32□□□□□ -1.08
VMP1-215ENST00000592619 KIF11P52732 1056 aa8.32□□□□□ -1.08
VMP1-215ENST00000592619 FAM102BQ5T8I3 360 aa8.32□□□□□ -1.08
VMP1-215ENST00000592619 STEAP3Q658P3 488 aa8.32□□□□□ -1.08
VMP1-215ENST00000592619 FSTL4Q6MZW2 842 aa8.32□□□□□ -1.08
VMP1-215ENST00000592619 ZZZ3Q8IYH5 903 aa8.32□□□□□ -1.08
VMP1-215ENST00000592619 SMOC1Q9H4F8 434 aa8.32□□□□□ -1.08
VMP1-215ENST00000592619 KCNH7Q9NS40 1196 aa8.32□□□□□ -1.08
VMP1-215ENST00000592619 C14orf119Q9NWQ9 140 aa8.32□□□□□ -1.08
VMP1-215ENST00000592619 ZNF180Q9UJW8 692 aa8.32□□□□□ -1.08
VMP1-215ENST00000592619 ZNF652Q9Y2D9 606 aa8.32□□□□□ -1.08
VMP1-215ENST00000592619 ATP23Q9Y6H3 246 aa8.32□□□□□ -1.08
VMP1-215ENST00000592619 WIZO95785 1651 aa8.31□□□□□ -1.08
VMP1-215ENST00000592619 TRIM75PA6NK02 468 aa8.31□□□□□ -1.08
VMP1-215ENST00000592619 KCNK3O14649 394 aa8.31□□□□□ -1.08
VMP1-215ENST00000592619 HGSO14964 777 aaPredicted RBP8.31□□□□□ -1.08
VMP1-215ENST00000592619 COBLO75128 1261 aa8.31□□□□□ -1.08
VMP1-215ENST00000592619 NTRK1P04629 796 aa8.31□□□□□ -1.08
VMP1-215ENST00000592619 RBP3P10745 1247 aa8.31□□□□□ -1.08
VMP1-215ENST00000592619 ZSCAN20P17040 1043 aaPredicted RBP8.31□□□□□ -1.08
VMP1-215ENST00000592619 GJA4P35212 333 aa8.31□□□□□ -1.08
VMP1-215ENST00000592619 IARSP41252 1262 aaKnown RBP8.31□□□□□ -1.08
VMP1-215ENST00000592619 PRSS36Q5K4E3 855 aa8.31□□□□□ -1.08
VMP1-215ENST00000592619 KCTD1Q719H9 257 aa8.31□□□□□ -1.08
VMP1-215ENST00000592619 TCEAL8Q8IYN2 117 aa8.31□□□□□ -1.08
VMP1-215ENST00000592619 C1orf162Q8NEQ5 155 aaPredicted RBP8.31□□□□□ -1.08
VMP1-215ENST00000592619 NUP43Q8NFH3 380 aa8.31□□□□□ -1.08
VMP1-215ENST00000592619 PHOSPHO1Q8TCT1 267 aa8.31□□□□□ -1.08
VMP1-215ENST00000592619 FAXDC2Q96IV6 333 aa8.31□□□□□ -1.08
VMP1-215ENST00000592619 PLCD4Q9BRC7 762 aa8.31□□□□□ -1.08
VMP1-215ENST00000592619 KRTAP9-9Q9BYP9 154 aa8.31□□□□□ -1.08
VMP1-215ENST00000592619 KRTAP9-4Q9BYQ2 154 aa8.31□□□□□ -1.08
VMP1-215ENST00000592619 RHOBTB2Q9BYZ6 727 aa8.31□□□□□ -1.08
VMP1-215ENST00000592619 ZDHHC5Q9C0B5 715 aa8.31□□□□□ -1.08
VMP1-215ENST00000592619 TOMM22Q9NS69 142 aa8.31□□□□□ -1.08
VMP1-215ENST00000592619 GABBR1Q9UBS5 961 aa8.31□□□□□ -1.08
VMP1-215ENST00000592619 RSF1Q96T23 1441 aaPredicted RBP8.3□□□□□ -1.08
VMP1-215ENST00000592619 SCDO00767 359 aa8.3□□□□□ -1.08
VMP1-215ENST00000592619 GLI4P10075 376 aa8.3□□□□□ -1.08
VMP1-215ENST00000592619 PRKCAP17252 672 aa8.3□□□□□ -1.08
VMP1-215ENST00000592619 SLC23A3Q6PIS1 610 aa8.3□□□□□ -1.08
VMP1-215ENST00000592619 FRMD7Q6ZUT3 714 aa8.3□□□□□ -1.08
VMP1-215ENST00000592619 CABP7Q86V35 215 aa8.3□□□□□ -1.08
VMP1-215ENST00000592619 FAM9AQ8IZU1 332 aaPredicted RBP8.3□□□□□ -1.08
VMP1-215ENST00000592619 NETO2Q8NC67 525 aa8.3□□□□□ -1.08
VMP1-215ENST00000592619 JPH3Q8WXH2 748 aaPredicted RBP8.3□□□□□ -1.08
VMP1-215ENST00000592619 SEC14L1Q92503 715 aa8.3□□□□□ -1.08
VMP1-215ENST00000592619 CD244Q9BZW8 370 aa8.3□□□□□ -1.08
VMP1-215ENST00000592619 ZMAT4Q9H898 229 aa8.3□□□□□ -1.08
VMP1-215ENST00000592619 LUC7LQ9NQ29 371 aaKnown RBP8.3□□□□□ -1.08
VMP1-215ENST00000592619 NOC2LQ9Y3T9 749 aaKnown RBP8.3□□□□□ -1.08
VMP1-215ENST00000592619 SNUPNO95149 360 aaKnown RBP8.29□□□□□ -1.08
VMP1-215ENST00000592619 CCND1P24385 295 aa8.29□□□□□ -1.08
VMP1-215ENST00000592619 TACR1P25103 407 aa8.29□□□□□ -1.08
VMP1-215ENST00000592619 CD40P25942 277 aa8.29□□□□□ -1.08
VMP1-215ENST00000592619 ITGB7P26010 798 aa8.29□□□□□ -1.08
VMP1-215ENST00000592619 SDHAP31040 664 aa8.29□□□□□ -1.08
VMP1-215ENST00000592619 FNTBP49356 437 aa8.29□□□□□ -1.08
VMP1-215ENST00000592619 HK2P52789 917 aa8.29□□□□□ -1.08
VMP1-215ENST00000592619 HLTFQ14527 1009 aaKnown RBP eCLIP8.29□□□□□ -1.08
VMP1-215ENST00000592619 SEC23AQ15436 765 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms