RNA–Protein interactions for RNA: ENST00000592533.5

ZNF540-210, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF540, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-210ENST00000592533 TMEM59LQ9UK28 342 aa12.77□□□□□ -0.36
ZNF540-210ENST00000592533 TRAF3IP3Q9Y228 551 aa12.77□□□□□ -0.36
ZNF540-210ENST00000592533 GRIN2DO15399 1336 aa12.77□□□□□ -0.36
ZNF540-210ENST00000592533 PALMO75781 387 aa12.77□□□□□ -0.37
ZNF540-210ENST00000592533 IRAK1P51617 712 aa12.77□□□□□ -0.37
ZNF540-210ENST00000592533 SLC7A5Q01650 507 aa12.77□□□□□ -0.37
ZNF540-210ENST00000592533 MCTP2Q6DN12 878 aa12.77□□□□□ -0.37
ZNF540-210ENST00000592533 FAM196AQ6ZSG2 479 aa12.77□□□□□ -0.37
ZNF540-210ENST00000592533 EPM2AIP1Q7L775 607 aaPredicted RBP12.77□□□□□ -0.37
ZNF540-210ENST00000592533 FRMD5Q7Z6J6 570 aa12.77□□□□□ -0.37
ZNF540-210ENST00000592533 ANKRD13CQ8N6S4 541 aa12.77□□□□□ -0.37
ZNF540-210ENST00000592533 COA1Q9GZY4 146 aa12.77□□□□□ -0.37
ZNF540-210ENST00000592533 EMILIN3Q9NT22 766 aa12.77□□□□□ -0.37
ZNF540-210ENST00000592533 SMARCAL1Q9NZC9 954 aa12.77□□□□□ -0.37
ZNF540-210ENST00000592533 EHD2Q9NZN4 543 aa12.77□□□□□ -0.37
ZNF540-210ENST00000592533 FBXL5Q9UKA1 691 aa12.77□□□□□ -0.37
ZNF540-210ENST00000592533 NENFQ9UMX5 172 aa12.77□□□□□ -0.37
ZNF540-210ENST00000592533 KIAA1024Q9UPX6 916 aa12.77□□□□□ -0.37
ZNF540-210ENST00000592533 E9PMD0 336 aa12.77□□□□□ -0.37
ZNF540-210ENST00000592533 TBX3O15119 743 aa12.77□□□□□ -0.37
ZNF540-210ENST00000592533 BUB1O43683 1085 aa12.77□□□□□ -0.37
ZNF540-210ENST00000592533 KLRC1P26715 233 aa12.77□□□□□ -0.37
ZNF540-210ENST00000592533 SPIRE1Q08AE8 756 aa12.77□□□□□ -0.37
ZNF540-210ENST00000592533 ARSHQ5FYA8 562 aa12.77□□□□□ -0.37
ZNF540-210ENST00000592533 TTBK2Q6IQ55 1244 aa12.77□□□□□ -0.37
ZNF540-210ENST00000592533 GPBP1Q86WP2 473 aa12.77□□□□□ -0.37
ZNF540-210ENST00000592533 ZBTB9Q96C00 473 aa12.77□□□□□ -0.37
ZNF540-210ENST00000592533 BZW2Q9Y6E2 419 aaKnown RBP12.77□□□□□ -0.37
ZNF540-210ENST00000592533 LOXHD1Q8IVV2 1947 aa12.76□□□□□ -0.37
ZNF540-210ENST00000592533 A0A087X0T9 212 aa12.76□□□□□ -0.37
ZNF540-210ENST00000592533 USP17L10C9JJH3 530 aa12.76□□□□□ -0.37
ZNF540-210ENST00000592533 BHMG1C9JSJ3 638 aaPredicted RBP12.76□□□□□ -0.37
ZNF540-210ENST00000592533 FAM228BP0C875 321 aa12.76□□□□□ -0.37
ZNF540-210ENST00000592533 PAK2Q13177 524 aa12.76□□□□□ -0.37
ZNF540-210ENST00000592533 AP3B2Q13367 1082 aa12.76□□□□□ -0.37
ZNF540-210ENST00000592533 DNAJC21Q5F1R6 531 aaKnown RBP12.76□□□□□ -0.37
ZNF540-210ENST00000592533 IQCKQ8N0W5 287 aa12.76□□□□□ -0.37
ZNF540-210ENST00000592533 TBC1D5Q92609 795 aa12.76□□□□□ -0.37
ZNF540-210ENST00000592533 MKL1Q969V6 931 aa12.76□□□□□ -0.37
ZNF540-210ENST00000592533 STK24Q9Y6E0 443 aa12.76□□□□□ -0.37
ZNF540-210ENST00000592533 EIF3HO15372 352 aaKnown RBP eCLIP12.76□□□□□ -0.37
ZNF540-210ENST00000592533 HSF2BPO75031 334 aa12.76□□□□□ -0.37
ZNF540-210ENST00000592533 GYS1P13807 737 aa12.76□□□□□ -0.37
ZNF540-210ENST00000592533 ASIC2Q16515 512 aa12.76□□□□□ -0.37
ZNF540-210ENST00000592533 BMT2Q1RMZ1 405 aa12.76□□□□□ -0.37
ZNF540-210ENST00000592533 TTMPQ5BVD1 217 aa12.76□□□□□ -0.37
ZNF540-210ENST00000592533 CLEC10AQ8IUN9 316 aa12.76□□□□□ -0.37
ZNF540-210ENST00000592533 C10orf67Q8IYJ2 551 aa12.76□□□□□ -0.37
ZNF540-210ENST00000592533 ETNPPLQ8TBG4 499 aa12.76□□□□□ -0.37
ZNF540-210ENST00000592533 FAM107BQ9H098 131 aa12.76□□□□□ -0.37
ZNF540-210ENST00000592533 DHX36Q9H2U1 1008 aaKnown RBP12.76□□□□□ -0.37
ZNF540-210ENST00000592533 RSPH14Q9UHP6 348 aa12.76□□□□□ -0.37
ZNF540-210ENST00000592533 POTEB3A0JP26 581 aa12.75□□□□□ -0.37
ZNF540-210ENST00000592533 POTECB2RU33 542 aa12.75□□□□□ -0.37
ZNF540-210ENST00000592533 GLI1P08151 1106 aa12.75□□□□□ -0.37
ZNF540-210ENST00000592533 PICALMQ13492 652 aa12.75□□□□□ -0.37
ZNF540-210ENST00000592533 POTEBQ6S5H4 581 aa12.75□□□□□ -0.37
ZNF540-210ENST00000592533 IRF2BP2Q7Z5L9 587 aa12.75□□□□□ -0.37
ZNF540-210ENST00000592533 DCAF4Q8WV16 495 aa12.75□□□□□ -0.37
ZNF540-210ENST00000592533 MS4A14Q96JA4 679 aa12.75□□□□□ -0.37
ZNF540-210ENST00000592533 CCDC17Q96LX7 622 aa12.75□□□□□ -0.37
ZNF540-210ENST00000592533 PSMB7Q99436 277 aa12.75□□□□□ -0.37
ZNF540-210ENST00000592533 MXD3Q9BW11 206 aa12.75□□□□□ -0.37
ZNF540-210ENST00000592533 CAPS2Q9BXY5 557 aa12.75□□□□□ -0.37
ZNF540-210ENST00000592533 CETN3O15182 167 aa12.75□□□□□ -0.37
ZNF540-210ENST00000592533 CPP00450 1065 aa12.75□□□□□ -0.37
ZNF540-210ENST00000592533 SERPINB2P05120 415 aa12.75□□□□□ -0.37
ZNF540-210ENST00000592533 PRKCIP41743 596 aa12.75□□□□□ -0.37
ZNF540-210ENST00000592533 MATR3P43243 847 aaKnown RBP eCLIP12.75□□□□□ -0.37
ZNF540-210ENST00000592533 EIF6P56537 245 aaKnown RBP12.75□□□□□ -0.37
ZNF540-210ENST00000592533 KLHL30Q0D2K2 578 aa12.75□□□□□ -0.37
ZNF540-210ENST00000592533 KCNH2Q12809 1159 aa12.75□□□□□ -0.37
ZNF540-210ENST00000592533 ADAM9Q13443 819 aa12.75□□□□□ -0.37
ZNF540-210ENST00000592533 CDC37Q16543 378 aaPredicted RBP12.75□□□□□ -0.37
ZNF540-210ENST00000592533 Q4G0T1 1027 aa12.75□□□□□ -0.37
ZNF540-210ENST00000592533 HERC4Q5GLZ8 1057 aaPredicted RBP12.75□□□□□ -0.37
ZNF540-210ENST00000592533 SP8Q8IXZ3 490 aa12.75□□□□□ -0.37
ZNF540-210ENST00000592533 KCTD17Q8N5Z5 321 aa12.75□□□□□ -0.37
ZNF540-210ENST00000592533 WHAMMQ8TF30 809 aa12.75□□□□□ -0.37
ZNF540-210ENST00000592533 ANO3Q9BYT9 981 aa12.75□□□□□ -0.37
ZNF540-210ENST00000592533 ATXN2Q99700 1313 aaKnown RBP12.75□□□□□ -0.37
ZNF540-210ENST00000592533 ZEB2O60315 1214 aa12.75□□□□□ -0.37
ZNF540-210ENST00000592533 MED24O75448 989 aa12.75□□□□□ -0.37
ZNF540-210ENST00000592533 ZBTB48P10074 688 aaPredicted RBP12.75□□□□□ -0.37
ZNF540-210ENST00000592533 GTF2IP78347 998 aa12.75□□□□□ -0.37
ZNF540-210ENST00000592533 RAPGEF1Q13905 1077 aa12.75□□□□□ -0.37
ZNF540-210ENST00000592533 HHIPL2Q6UWX4 724 aa12.75□□□□□ -0.37
ZNF540-210ENST00000592533 CERS5Q8N5B7 392 aa12.75□□□□□ -0.37
ZNF540-210ENST00000592533 USP38Q8NB14 1042 aa12.75□□□□□ -0.37
ZNF540-210ENST00000592533 GJA10Q969M2 543 aa12.75□□□□□ -0.37
ZNF540-210ENST00000592533 MARCH6O60337 910 aa12.74□□□□□ -0.37
ZNF540-210ENST00000592533 HEXIM1O94992 359 aaKnown RBP12.74□□□□□ -0.37
ZNF540-210ENST00000592533 KIAA0753Q2KHM9 967 aa12.74□□□□□ -0.37
ZNF540-210ENST00000592533 QRICH1Q2TAL8 776 aa12.74□□□□□ -0.37
ZNF540-210ENST00000592533 EFCAB13Q8IY85 973 aa12.74□□□□□ -0.37
ZNF540-210ENST00000592533 ZIM3Q96PE6 472 aa12.74□□□□□ -0.37
ZNF540-210ENST00000592533 NPHP3-ACAD11A0A0J9YXS1 232 aa12.74□□□□□ -0.37
ZNF540-210ENST00000592533 PDXKO00764 312 aa12.74□□□□□ -0.37
ZNF540-210ENST00000592533 SLC16A3O15427 465 aaKnown RBP12.74□□□□□ -0.37
ZNF540-210ENST00000592533 ERCC3P19447 782 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms