RNA–Protein interactions for RNA: ENST00000592467.1

CIRBP-239, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-239ENST00000592467 CEP55Q53EZ4 464 aa23.05■■□□□ 1.28
CIRBP-239ENST00000592467 UTP14CQ5TAP6 766 aaKnown RBP23.05■■□□□ 1.28
CIRBP-239ENST00000592467 SEPT1Q8WYJ6 367 aa23.05■■□□□ 1.28
CIRBP-239ENST00000592467 PCYT2Q99447 389 aa23.05■■□□□ 1.28
CIRBP-239ENST00000592467 MTIF3Q9H2K0 278 aaKnown RBP23.05■■□□□ 1.28
CIRBP-239ENST00000592467 PDRG1Q9NUG6 133 aa23.05■■□□□ 1.28
CIRBP-239ENST00000592467 IGLV3-22A0A075B6J6 115 aa23.04■■□□□ 1.28
CIRBP-239ENST00000592467 C17orf102A2RUQ5 167 aa23.04■■□□□ 1.28
CIRBP-239ENST00000592467 FAM86B1E9PN63 330 aa23.04■■□□□ 1.28
CIRBP-239ENST00000592467 TREHO43280 583 aa23.04■■□□□ 1.28
CIRBP-239ENST00000592467 EDIL3O43854 480 aa23.04■■□□□ 1.28
CIRBP-239ENST00000592467 CYP3A4P08684 503 aa23.04■■□□□ 1.28
CIRBP-239ENST00000592467 FAM86B2P0C5J1 330 aa23.04■■□□□ 1.28
CIRBP-239ENST00000592467 ZNF618Q5T7W0 954 aa23.04■■□□□ 1.28
CIRBP-239ENST00000592467 TIFAQ96CG3 184 aa23.04■■□□□ 1.28
CIRBP-239ENST00000592467 AGO4Q9HCK5 861 aaKnown RBP23.04■■□□□ 1.28
CIRBP-239ENST00000592467 YBX2Q9Y2T7 364 aaKnown RBP23.04■■□□□ 1.28
CIRBP-239ENST00000592467 NFASCO94856 1347 aa23.04■■□□□ 1.28
CIRBP-239ENST00000592467 KAT6AQ92794 2004 aa23.03■■□□□ 1.28
CIRBP-239ENST00000592467 ANAPC15P60006 121 aa23.03■■□□□ 1.28
CIRBP-239ENST00000592467 NIPA1Q7RTP0 329 aa23.03■■□□□ 1.28
CIRBP-239ENST00000592467 ATP6V0A1Q93050 837 aa23.03■■□□□ 1.28
CIRBP-239ENST00000592467 C6orf50Q9HD87 102 aa23.03■■□□□ 1.28
CIRBP-239ENST00000592467 SETD4Q9NVD3 440 aa23.03■■□□□ 1.28
CIRBP-239ENST00000592467 VPS54Q9P1Q0 977 aa23.03■■□□□ 1.28
CIRBP-239ENST00000592467 SLC4A7Q9Y6M7 1214 aa23.03■■□□□ 1.28
CIRBP-239ENST00000592467 LGR5O75473 907 aa23.02■■□□□ 1.28
CIRBP-239ENST00000592467 SEC24BO95487 1268 aa23.02■■□□□ 1.28
CIRBP-239ENST00000592467 GRIN2CQ14957 1233 aa23.02■■□□□ 1.28
CIRBP-239ENST00000592467 CCDC12Q8WUD4 166 aaPredicted RBP23.02■■□□□ 1.28
CIRBP-239ENST00000592467 ZNF576Q9H609 170 aa23.02■■□□□ 1.28
CIRBP-239ENST00000592467 JPH1Q9HDC5 661 aaPredicted RBP23.02■■□□□ 1.28
CIRBP-239ENST00000592467 ZNF215Q9UL58 517 aaPredicted RBP23.02■■□□□ 1.28
CIRBP-239ENST00000592467 SIP14410 1827 aa23.02■■□□□ 1.28
CIRBP-239ENST00000592467 EMSYQ7Z589 1322 aa23.02■■□□□ 1.28
CIRBP-239ENST00000592467 PARNO95453 639 aaKnown RBP23.01■■□□□ 1.27
CIRBP-239ENST00000592467 RABGGTBP53611 331 aa23.01■■□□□ 1.27
CIRBP-239ENST00000592467 REXO1Q8N1G1 1221 aaKnown RBP23.01■■□□□ 1.27
CIRBP-239ENST00000592467 RASGRP4Q8TDF6 673 aa23.01■■□□□ 1.27
CIRBP-239ENST00000592467 LMBR1Q8WVP7 490 aa23.01■■□□□ 1.27
CIRBP-239ENST00000592467 MYLIPQ8WY64 445 aa23.01■■□□□ 1.27
CIRBP-239ENST00000592467 SH3GLB2Q9NR46 395 aa23.01■■□□□ 1.27
CIRBP-239ENST00000592467 SLC9A2Q9UBY0 812 aa23.01■■□□□ 1.27
CIRBP-239ENST00000592467 ZBBXA8MT70 800 aa23■■□□□ 1.27
CIRBP-239ENST00000592467 DHX15O43143 795 aaKnown RBP23■■□□□ 1.27
CIRBP-239ENST00000592467 ATG7O95352 703 aa23■■□□□ 1.27
CIRBP-239ENST00000592467 ACTN1P12814 892 aa23■■□□□ 1.27
CIRBP-239ENST00000592467 GNA11P29992 359 aa23■■□□□ 1.27
CIRBP-239ENST00000592467 AKAP17AQ02040 695 aaKnown RBP23■■□□□ 1.27
CIRBP-239ENST00000592467 SCRN1Q12765 414 aa23■■□□□ 1.27
CIRBP-239ENST00000592467 STK3Q13188 491 aa23■■□□□ 1.27
CIRBP-239ENST00000592467 NPY5RQ15761 445 aa23■■□□□ 1.27
CIRBP-239ENST00000592467 MCTP2Q6DN12 878 aa23■■□□□ 1.27
CIRBP-239ENST00000592467 OSBPL7Q9BZF2 842 aa23■■□□□ 1.27
CIRBP-239ENST00000592467 FTOQ9C0B1 505 aaKnown RBP eCLIP23■■□□□ 1.27
CIRBP-239ENST00000592467 TPCN1Q9ULQ1 816 aa23■■□□□ 1.27
CIRBP-239ENST00000592467 BAIAP3O94812 1187 aa22.99■■□□□ 1.27
CIRBP-239ENST00000592467 CCNE2O96020 404 aa22.99■■□□□ 1.27
CIRBP-239ENST00000592467 MYOGP15173 224 aa22.99■■□□□ 1.27
CIRBP-239ENST00000592467 ATP2A2P16615 1042 aaKnown RBP22.99■■□□□ 1.27
CIRBP-239ENST00000592467 CIITAP33076 1130 aa22.99■■□□□ 1.27
CIRBP-239ENST00000592467 ACTR2P61160 394 aa22.99■■□□□ 1.27
CIRBP-239ENST00000592467 MKRN4PQ13434 485 aaPredicted RBP22.99■■□□□ 1.27
CIRBP-239ENST00000592467 RAB30Q15771 203 aa22.99■■□□□ 1.27
CIRBP-239ENST00000592467 CCDC148Q8NFR7 591 aa22.99■■□□□ 1.27
CIRBP-239ENST00000592467 AIFM3Q96NN9 605 aa22.99■■□□□ 1.27
CIRBP-239ENST00000592467 NKX2-4Q9H2Z4 354 aa22.99■■□□□ 1.27
CIRBP-239ENST00000592467 ERAP1Q9NZ08 941 aa22.99■■□□□ 1.27
CIRBP-239ENST00000592467 NRCAMQ92823 1304 aa22.99■■□□□ 1.27
CIRBP-239ENST00000592467 PRUNE2Q8WUY3 3088 aa22.98■■□□□ 1.27
CIRBP-239ENST00000592467 MICAL3Q7RTP6 2002 aa22.98■■□□□ 1.27
CIRBP-239ENST00000592467 IGKV6D-21A0A0A0MT36 114 aa22.98■■□□□ 1.27
CIRBP-239ENST00000592467 M0R2N6 131 aa22.98■■□□□ 1.27
CIRBP-239ENST00000592467 THPOP40225 353 aa22.98■■□□□ 1.27
CIRBP-239ENST00000592467 SSRP1Q08945 709 aaKnown RBP22.98■■□□□ 1.27
CIRBP-239ENST00000592467 MARCH8Q5T0T0 291 aa22.98■■□□□ 1.27
CIRBP-239ENST00000592467 CNKSR3Q6P9H4 555 aa22.98■■□□□ 1.27
CIRBP-239ENST00000592467 PLA2G4DQ86XP0 818 aa22.98■■□□□ 1.27
CIRBP-239ENST00000592467 PHOSPHO2Q8TCD6 241 aa22.98■■□□□ 1.27
CIRBP-239ENST00000592467 LENG9Q96B70 501 aa22.98■■□□□ 1.27
CIRBP-239ENST00000592467 SDF4Q9BRK5 362 aa22.98■■□□□ 1.27
CIRBP-239ENST00000592467 SMARCAD1Q9H4L7 1026 aa22.98■■□□□ 1.27
CIRBP-239ENST00000592467 PCDHA11Q9Y5I1 949 aa22.98■■□□□ 1.27
CIRBP-239ENST00000592467 UNC80Q8N2C7 3258 aa22.98■■□□□ 1.27
CIRBP-239ENST00000592467 WDR81Q562E7 1941 aa22.98■■□□□ 1.27
CIRBP-239ENST00000592467 MBLAC1A4D2B0 266 aaPredicted RBP22.97■■□□□ 1.27
CIRBP-239ENST00000592467 CAND2O75155 1236 aa22.97■■□□□ 1.27
CIRBP-239ENST00000592467 DEXIO95424 95 aa22.97■■□□□ 1.27
CIRBP-239ENST00000592467 GNAT1P11488 350 aa22.97■■□□□ 1.27
CIRBP-239ENST00000592467 MARK3P27448 753 aa22.97■■□□□ 1.27
CIRBP-239ENST00000592467 AK2P54819 239 aa22.97■■□□□ 1.27
CIRBP-239ENST00000592467 WDR5P61964 334 aaKnown RBP22.97■■□□□ 1.27
CIRBP-239ENST00000592467 TRIM22Q8IYM9 498 aa22.97■■□□□ 1.27
CIRBP-239ENST00000592467 SLC9A7Q96T83 725 aa22.97■■□□□ 1.27
CIRBP-239ENST00000592467 MSRAQ9UJ68 235 aa22.97■■□□□ 1.27
CIRBP-239ENST00000592467 RSPH10B2B2RC85 870 aa22.96■■□□□ 1.27
CIRBP-239ENST00000592467 PFKFB2O60825 505 aa22.96■■□□□ 1.27
CIRBP-239ENST00000592467 CTDNEP1O95476 244 aa22.96■■□□□ 1.27
CIRBP-239ENST00000592467 RSPH10BP0C881 870 aa22.96■■□□□ 1.27
CIRBP-239ENST00000592467 ZNF76P36508 570 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms