RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 SETD4Q9NVD3 440 aa21.64■■□□□ 1.05
CCDC43-205ENST00000592333 PRRC2BQ5JSZ5 2229 aaKnown RBP21.64■■□□□ 1.05
CCDC43-205ENST00000592333 LCHNA4D1U4 455 aa21.63■■□□□ 1.05
CCDC43-205ENST00000592333 FOSP01100 380 aaPredicted RBP21.63■■□□□ 1.05
CCDC43-205ENST00000592333 HMGB1P09429 215 aaKnown RBP21.63■■□□□ 1.05
CCDC43-205ENST00000592333 ITGB5P18084 799 aa21.63■■□□□ 1.05
CCDC43-205ENST00000592333 TCF7P36402 384 aaPredicted RBP21.63■■□□□ 1.05
CCDC43-205ENST00000592333 EXOSC10Q01780 885 aaKnown RBP21.63■■□□□ 1.05
CCDC43-205ENST00000592333 MTMR1Q13613 665 aa21.63■■□□□ 1.05
CCDC43-205ENST00000592333 KRT32Q14532 448 aa21.63■■□□□ 1.05
CCDC43-205ENST00000592333 SKIV2LQ15477 1246 aaKnown RBP21.63■■□□□ 1.05
CCDC43-205ENST00000592333 APOA5Q6Q788 366 aa21.63■■□□□ 1.05
CCDC43-205ENST00000592333 DHX32Q7L7V1 743 aaKnown RBP21.63■■□□□ 1.05
CCDC43-205ENST00000592333 SP7Q8TDD2 431 aaPredicted RBP21.63■■□□□ 1.05
CCDC43-205ENST00000592333 UHRF1Q96T88 793 aaPredicted RBP21.63■■□□□ 1.05
CCDC43-205ENST00000592333 JADE2Q9NQC1 790 aa21.63■■□□□ 1.05
CCDC43-205ENST00000592333 ERAP1Q9NZ08 941 aa21.63■■□□□ 1.05
CCDC43-205ENST00000592333 PCDHA6Q9UN73 950 aa21.63■■□□□ 1.05
CCDC43-205ENST00000592333 PCDHA8Q9Y5H6 950 aa21.63■■□□□ 1.05
CCDC43-205ENST00000592333 NCOR1O75376 2440 aa21.63■■□□□ 1.05
CCDC43-205ENST00000592333 LINC01553A4QN01 128 aa21.62■■□□□ 1.05
CCDC43-205ENST00000592333 RXRAP19793 462 aa21.62■■□□□ 1.05
CCDC43-205ENST00000592333 HOXD11P31277 338 aaPredicted RBP21.62■■□□□ 1.05
CCDC43-205ENST00000592333 UTP14CQ5TAP6 766 aaKnown RBP21.62■■□□□ 1.05
CCDC43-205ENST00000592333 FAM43BQ6ZT52 329 aaPredicted RBP21.62■■□□□ 1.05
CCDC43-205ENST00000592333 MICU3Q86XE3 530 aa21.62■■□□□ 1.05
CCDC43-205ENST00000592333 CMTR1Q8N1G2 835 aaKnown RBP21.62■■□□□ 1.05
CCDC43-205ENST00000592333 LMBR1Q8WVP7 490 aa21.62■■□□□ 1.05
CCDC43-205ENST00000592333 TOP1MTQ969P6 601 aa21.62■■□□□ 1.05
CCDC43-205ENST00000592333 SMARCAD1Q9H4L7 1026 aa21.62■■□□□ 1.05
CCDC43-205ENST00000592333 SUGCTQ9HAC7 445 aa21.62■■□□□ 1.05
CCDC43-205ENST00000592333 COL4A6Q14031 1691 aa21.62■■□□□ 1.05
CCDC43-205ENST00000592333 ATP9AO75110 1047 aa21.61■■□□□ 1.05
CCDC43-205ENST00000592333 ARHGAP4P98171 946 aa21.61■■□□□ 1.05
CCDC43-205ENST00000592333 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.61■■□□□ 1.05
CCDC43-205ENST00000592333 HEATR3Q7Z4Q2 680 aa21.61■■□□□ 1.05
CCDC43-205ENST00000592333 TMCO2Q7Z6W1 182 aaPredicted RBP21.61■■□□□ 1.05
CCDC43-205ENST00000592333 RSPH3Q86UC2 560 aa21.61■■□□□ 1.05
CCDC43-205ENST00000592333 HLA-CQ95604 372 aa21.61■■□□□ 1.05
CCDC43-205ENST00000592333 XIRP2A4UGR9 3374 aa21.61■■□□□ 1.05
CCDC43-205ENST00000592333 MICAL3Q7RTP6 2002 aa21.6■■□□□ 1.05
CCDC43-205ENST00000592333 GSTTP1A0A1W2PQM5 241 aa21.6■■□□□ 1.05
CCDC43-205ENST00000592333 MBLAC1A4D2B0 266 aaPredicted RBP21.6■■□□□ 1.05
CCDC43-205ENST00000592333 TRIM50Q86XT4 487 aa21.6■■□□□ 1.05
CCDC43-205ENST00000592333 MYOCDQ8IZQ8 938 aa21.6■■□□□ 1.05
CCDC43-205ENST00000592333 CCDC82Q8N4S0 544 aa21.6■■□□□ 1.05
CCDC43-205ENST00000592333 RIC8AQ9NPQ8 531 aa21.6■■□□□ 1.05
CCDC43-205ENST00000592333 REV3LO60673 3130 aa21.6■■□□□ 1.05
CCDC43-205ENST00000592333 NFASCO94856 1347 aa21.59■■□□□ 1.05
CCDC43-205ENST00000592333 CNTNAP5Q8WYK1 1306 aa21.59■■□□□ 1.05
CCDC43-205ENST00000592333 BDP1A6H8Y1 2624 aa21.59■■□□□ 1.05
CCDC43-205ENST00000592333 RRN3P2A6NIE6 340 aa21.59■■□□□ 1.05
CCDC43-205ENST00000592333 ZBTB43O43298 467 aa21.59■■□□□ 1.05
CCDC43-205ENST00000592333 COL9A3Q14050 684 aaPredicted RBP21.59■■□□□ 1.05
CCDC43-205ENST00000592333 MXRA8Q9BRK3 442 aa21.59■■□□□ 1.05
CCDC43-205ENST00000592333 LRRC2Q9BYS8 371 aa21.59■■□□□ 1.05
CCDC43-205ENST00000592333 SIP14410 1827 aa21.58■■□□□ 1.05
CCDC43-205ENST00000592333 SP4Q02446 784 aa21.58■■□□□ 1.05
CCDC43-205ENST00000592333 FUT2Q10981 343 aa21.58■■□□□ 1.05
CCDC43-205ENST00000592333 PPFIA1Q13136 1202 aa21.58■■□□□ 1.05
CCDC43-205ENST00000592333 AP3B2Q13367 1082 aa21.58■■□□□ 1.05
CCDC43-205ENST00000592333 UBE2SQ16763 222 aa21.58■■□□□ 1.05
CCDC43-205ENST00000592333 RTN1Q16799 776 aa21.58■■□□□ 1.05
CCDC43-205ENST00000592333 GLG1Q92896 1179 aa21.58■■□□□ 1.05
CCDC43-205ENST00000592333 IFIH1Q9BYX4 1025 aaKnown RBP21.58■■□□□ 1.05
CCDC43-205ENST00000592333 JPH1Q9HDC5 661 aaPredicted RBP21.58■■□□□ 1.05
CCDC43-205ENST00000592333 KCNH7Q9NS40 1196 aa21.58■■□□□ 1.05
CCDC43-205ENST00000592333 SQORQ9Y6N5 450 aa21.58■■□□□ 1.05
CCDC43-205ENST00000592333 KAT6AQ92794 2004 aa21.58■■□□□ 1.04
CCDC43-205ENST00000592333 DOCK5Q9H7D0 1870 aa21.58■■□□□ 1.04
CCDC43-205ENST00000592333 CDC45O75419 566 aa21.57■■□□□ 1.04
CCDC43-205ENST00000592333 NAPAP54920 295 aa21.57■■□□□ 1.04
CCDC43-205ENST00000592333 TFF2Q03403 129 aa21.57■■□□□ 1.04
CCDC43-205ENST00000592333 WWC2Q6AWC2 1192 aa21.57■■□□□ 1.04
CCDC43-205ENST00000592333 MCTP2Q6DN12 878 aa21.57■■□□□ 1.04
CCDC43-205ENST00000592333 PLPPR4Q7Z2D5 763 aa21.57■■□□□ 1.04
CCDC43-205ENST00000592333 FBXO22Q8NEZ5 403 aa21.57■■□□□ 1.04
CCDC43-205ENST00000592333 AZI2Q9H6S1 392 aa21.57■■□□□ 1.04
CCDC43-205ENST00000592333 BARHL2Q9NY43 387 aa21.57■■□□□ 1.04
CCDC43-205ENST00000592333 SLC9A2Q9UBY0 812 aa21.57■■□□□ 1.04
CCDC43-205ENST00000592333 TUBE1Q9UJT0 475 aa21.57■■□□□ 1.04
CCDC43-205ENST00000592333 CCDC196A0A1B0GTZ2 297 aa21.56■■□□□ 1.04
CCDC43-205ENST00000592333 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.56■■□□□ 1.04
CCDC43-205ENST00000592333 hCG_1642624A0A1W2PR95 340 aa21.56■■□□□ 1.04
CCDC43-205ENST00000592333 CHRNA1P02708 482 aa21.56■■□□□ 1.04
CCDC43-205ENST00000592333 CTSHP09668 335 aa21.56■■□□□ 1.04
CCDC43-205ENST00000592333 SLC26A2P50443 739 aa21.56■■□□□ 1.04
CCDC43-205ENST00000592333 GRIK4Q16099 956 aa21.56■■□□□ 1.04
CCDC43-205ENST00000592333 PTPROQ16827 1216 aa21.56■■□□□ 1.04
CCDC43-205ENST00000592333 CEP55Q53EZ4 464 aa21.56■■□□□ 1.04
CCDC43-205ENST00000592333 KRT40Q6A162 431 aa21.56■■□□□ 1.04
CCDC43-205ENST00000592333 FAM117BQ6P1L5 589 aa21.56■■□□□ 1.04
CCDC43-205ENST00000592333 NIPA1Q7RTP0 329 aa21.56■■□□□ 1.04
CCDC43-205ENST00000592333 SPRED2Q7Z698 418 aa21.56■■□□□ 1.04
CCDC43-205ENST00000592333 GDPD5Q8WTR4 605 aa21.56■■□□□ 1.04
CCDC43-205ENST00000592333 YME1L1Q96TA2 773 aa21.56■■□□□ 1.04
CCDC43-205ENST00000592333 SDF4Q9BRK5 362 aa21.56■■□□□ 1.04
CCDC43-205ENST00000592333 TELO2Q9Y4R8 837 aa21.56■■□□□ 1.04
CCDC43-205ENST00000592333 COL4A4P53420 1690 aaPredicted RBP21.56■■□□□ 1.04
CCDC43-205ENST00000592333 ADCY7P51828 1080 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms