RNA–Protein interactions for RNA: ENST00000592023.5

ERCC1-213, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-213ENST00000592023 SEMA6BQ9H3T3 888 aa17.33■□□□□ 0.36
ERCC1-213ENST00000592023 SLC4A7Q9Y6M7 1214 aa17.33■□□□□ 0.36
ERCC1-213ENST00000592023 GSTTP1A0A1W2PQM5 241 aa17.32■□□□□ 0.36
ERCC1-213ENST00000592023 TREHO43280 583 aa17.32■□□□□ 0.36
ERCC1-213ENST00000592023 GNA11P29992 359 aa17.32■□□□□ 0.36
ERCC1-213ENST00000592023 HOXC8P31273 242 aa17.32■□□□□ 0.36
ERCC1-213ENST00000592023 ANAPC15P60006 121 aa17.32■□□□□ 0.36
ERCC1-213ENST00000592023 SSRP1Q08945 709 aaKnown RBP17.32■□□□□ 0.36
ERCC1-213ENST00000592023 ZNF618Q5T7W0 954 aa17.32■□□□□ 0.36
ERCC1-213ENST00000592023 SERINC5Q86VE9 423 aa17.32■□□□□ 0.36
ERCC1-213ENST00000592023 SEPT1Q8WYJ6 367 aa17.32■□□□□ 0.36
ERCC1-213ENST00000592023 RNPEPQ9H4A4 650 aa17.32■□□□□ 0.36
ERCC1-213ENST00000592023 AGO4Q9HCK5 861 aaKnown RBP17.32■□□□□ 0.36
ERCC1-213ENST00000592023 SETD4Q9NVD3 440 aa17.32■□□□□ 0.36
ERCC1-213ENST00000592023 SLC9A2Q9UBY0 812 aa17.32■□□□□ 0.36
ERCC1-213ENST00000592023 NFASCO94856 1347 aa17.31■□□□□ 0.36
ERCC1-213ENST00000592023 FAM86B1E9PN63 330 aa17.31■□□□□ 0.36
ERCC1-213ENST00000592023 DDX39AO00148 427 aaKnown RBP17.31■□□□□ 0.36
ERCC1-213ENST00000592023 FAM86B2P0C5J1 330 aa17.31■□□□□ 0.36
ERCC1-213ENST00000592023 ATP2A2P16615 1042 aaKnown RBP17.31■□□□□ 0.36
ERCC1-213ENST00000592023 THPOP40225 353 aa17.31■□□□□ 0.36
ERCC1-213ENST00000592023 RABGGTBP53611 331 aa17.31■□□□□ 0.36
ERCC1-213ENST00000592023 ITGB3BPQ13352 177 aaPredicted RBP17.31■□□□□ 0.36
ERCC1-213ENST00000592023 RAB30Q15771 203 aa17.31■□□□□ 0.36
ERCC1-213ENST00000592023 MCTP2Q6DN12 878 aa17.31■□□□□ 0.36
ERCC1-213ENST00000592023 CPLX2Q6PUV4 134 aaKnown RBP17.31■□□□□ 0.36
ERCC1-213ENST00000592023 TRAF7Q6Q0C0 670 aa17.31■□□□□ 0.36
ERCC1-213ENST00000592023 PLA2G4DQ86XP0 818 aa17.31■□□□□ 0.36
ERCC1-213ENST00000592023 TET1Q8NFU7 2136 aa17.31■□□□□ 0.36
ERCC1-213ENST00000592023 BICD2Q8TD16 824 aa17.31■□□□□ 0.36
ERCC1-213ENST00000592023 LMBR1Q8WVP7 490 aa17.31■□□□□ 0.36
ERCC1-213ENST00000592023 MYLIPQ8WY64 445 aa17.31■□□□□ 0.36
ERCC1-213ENST00000592023 GLG1Q92896 1179 aa17.31■□□□□ 0.36
ERCC1-213ENST00000592023 CDX2Q99626 313 aaPredicted RBP17.31■□□□□ 0.36
ERCC1-213ENST00000592023 EMSYQ7Z589 1322 aa17.3■□□□□ 0.36
ERCC1-213ENST00000592023 MEIS1O00470 390 aa17.3■□□□□ 0.36
ERCC1-213ENST00000592023 NBNO60934 754 aa17.3■□□□□ 0.36
ERCC1-213ENST00000592023 DEXIO95424 95 aa17.3■□□□□ 0.36
ERCC1-213ENST00000592023 CTSHP09668 335 aa17.3■□□□□ 0.36
ERCC1-213ENST00000592023 GNAT1P11488 350 aa17.3■□□□□ 0.36
ERCC1-213ENST00000592023 NLRP5P59047 1200 aa17.3■□□□□ 0.36
ERCC1-213ENST00000592023 SCRN1Q12765 414 aa17.3■□□□□ 0.36
ERCC1-213ENST00000592023 GPNMBQ14956 572 aa17.3■□□□□ 0.36
ERCC1-213ENST00000592023 NIPA1Q7RTP0 329 aa17.3■□□□□ 0.36
ERCC1-213ENST00000592023 CRYGNQ8WXF5 182 aa17.3■□□□□ 0.36
ERCC1-213ENST00000592023 UIMC1Q96RL1 719 aa17.3■□□□□ 0.36
ERCC1-213ENST00000592023 NKX2-4Q9H2Z4 354 aa17.3■□□□□ 0.36
ERCC1-213ENST00000592023 ZNF576Q9H609 170 aa17.3■□□□□ 0.36
ERCC1-213ENST00000592023 ERAP1Q9NZ08 941 aa17.3■□□□□ 0.36
ERCC1-213ENST00000592023 MSRAQ9UJ68 235 aa17.3■□□□□ 0.36
ERCC1-213ENST00000592023 YBX2Q9Y2T7 364 aaKnown RBP17.3■□□□□ 0.36
ERCC1-213ENST00000592023 PTPRSQ13332 1948 aa17.29■□□□□ 0.36
ERCC1-213ENST00000592023 IGLV3-22A0A075B6J6 115 aa17.29■□□□□ 0.36
ERCC1-213ENST00000592023 PARNO95453 639 aaKnown RBP17.29■□□□□ 0.36
ERCC1-213ENST00000592023 AK2P54819 239 aa17.29■□□□□ 0.36
ERCC1-213ENST00000592023 ACTR2P61160 394 aa17.29■□□□□ 0.36
ERCC1-213ENST00000592023 PPFIA1Q13136 1202 aa17.29■□□□□ 0.36
ERCC1-213ENST00000592023 MBTPS1Q14703 1052 aa17.29■□□□□ 0.36
ERCC1-213ENST00000592023 AIFM3Q96NN9 605 aa17.29■□□□□ 0.36
ERCC1-213ENST00000592023 SLC9A7Q96T83 725 aa17.29■□□□□ 0.36
ERCC1-213ENST00000592023 PCYT2Q99447 389 aa17.29■□□□□ 0.36
ERCC1-213ENST00000592023 SLKQ9H2G2 1235 aaPredicted RBP17.29■□□□□ 0.36
ERCC1-213ENST00000592023 SMARCAD1Q9H4L7 1026 aa17.29■□□□□ 0.36
ERCC1-213ENST00000592023 SH3GLB2Q9NR46 395 aa17.29■□□□□ 0.36
ERCC1-213ENST00000592023 TPCN1Q9ULQ1 816 aa17.29■□□□□ 0.36
ERCC1-213ENST00000592023 NRCAMQ92823 1304 aa17.28■□□□□ 0.36
ERCC1-213ENST00000592023 RSPH10B2B2RC85 870 aa17.28■□□□□ 0.36
ERCC1-213ENST00000592023 DTNBO60941 627 aa17.28■□□□□ 0.36
ERCC1-213ENST00000592023 LGR5O75473 907 aa17.28■□□□□ 0.36
ERCC1-213ENST00000592023 BAIAP3O94812 1187 aa17.28■□□□□ 0.36
ERCC1-213ENST00000592023 SEC24BO95487 1268 aa17.28■□□□□ 0.36
ERCC1-213ENST00000592023 CXCL10P02778 98 aa17.28■□□□□ 0.36
ERCC1-213ENST00000592023 CYP3A4P08684 503 aa17.28■□□□□ 0.36
ERCC1-213ENST00000592023 RSPH10BP0C881 870 aa17.28■□□□□ 0.36
ERCC1-213ENST00000592023 MYOGP15173 224 aa17.28■□□□□ 0.36
ERCC1-213ENST00000592023 KCNJ6P48051 423 aa17.28■□□□□ 0.36
ERCC1-213ENST00000592023 SETQ01105 290 aaPredicted RBP17.28■□□□□ 0.36
ERCC1-213ENST00000592023 GRIN2CQ14957 1233 aa17.28■□□□□ 0.36
ERCC1-213ENST00000592023 GRIK4Q16099 956 aa17.28■□□□□ 0.36
ERCC1-213ENST00000592023 TCTN1Q2MV58 587 aa17.28■□□□□ 0.36
ERCC1-213ENST00000592023 CNKSR3Q6P9H4 555 aa17.28■□□□□ 0.36
ERCC1-213ENST00000592023 AZI2Q9H6S1 392 aa17.28■□□□□ 0.36
ERCC1-213ENST00000592023 LAMA2P24043 3122 aaKnown RBP17.27■□□□□ 0.36
ERCC1-213ENST00000592023 SIP14410 1827 aa17.27■□□□□ 0.36
ERCC1-213ENST00000592023 EIF5BO60841 1220 aaKnown RBP17.27■□□□□ 0.36
ERCC1-213ENST00000592023 CDKL5O76039 1030 aa17.27■□□□□ 0.36
ERCC1-213ENST00000592023 CCNE2O96020 404 aa17.27■□□□□ 0.36
ERCC1-213ENST00000592023 FOSL2P15408 326 aa17.27■□□□□ 0.36
ERCC1-213ENST00000592023 WDR5P61964 334 aaKnown RBP17.27■□□□□ 0.36
ERCC1-213ENST00000592023 IGBP1P78318 339 aa17.27■□□□□ 0.36
ERCC1-213ENST00000592023 ADAM17P78536 824 aa17.27■□□□□ 0.36
ERCC1-213ENST00000592023 ANKRD1Q15327 319 aa17.27■□□□□ 0.36
ERCC1-213ENST00000592023 PRR16Q569H4 304 aa17.27■□□□□ 0.36
ERCC1-213ENST00000592023 ZNF577Q9BSK1 485 aa17.27■□□□□ 0.36
ERCC1-213ENST00000592023 PCDHA4Q9UN74 947 aa17.27■□□□□ 0.36
ERCC1-213ENST00000592023 TRPC6Q9Y210 931 aa17.27■□□□□ 0.36
ERCC1-213ENST00000592023 IPO5O00410 1097 aaKnown RBP17.26■□□□□ 0.35
ERCC1-213ENST00000592023 PFKFB2O60825 505 aa17.26■□□□□ 0.35
ERCC1-213ENST00000592023 DEFB103AP81534 67 aa17.26■□□□□ 0.35
ERCC1-213ENST00000592023 PPP2R2DQ66LE6 453 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms