RNA–Protein interactions for RNA: ENST00000591903.1

SDF2-209, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-209ENST00000591903 RNF41Q9H4P4 317 aaPredicted RBP11.85□□□□□ -0.51
SDF2-209ENST00000591903 TCP11L1Q9NUJ3 509 aa11.85□□□□□ -0.51
SDF2-209ENST00000591903 PRR23AA6NEV1 266 aa11.84□□□□□ -0.51
SDF2-209ENST00000591903 H0Y858 1186 aa11.84□□□□□ -0.51
SDF2-209ENST00000591903 GALR2O43603 387 aaPredicted RBP11.84□□□□□ -0.51
SDF2-209ENST00000591903 GNAT1P11488 350 aa11.84□□□□□ -0.51
SDF2-209ENST00000591903 ATF7P17544 494 aaPredicted RBP11.84□□□□□ -0.51
SDF2-209ENST00000591903 GTF2F1P35269 517 aaKnown RBP eCLIP11.84□□□□□ -0.51
SDF2-209ENST00000591903 NBL1P41271 181 aa11.84□□□□□ -0.51
SDF2-209ENST00000591903 ID4P47928 161 aa11.84□□□□□ -0.51
SDF2-209ENST00000591903 CTDSPL2Q05D32 466 aa11.84□□□□□ -0.51
SDF2-209ENST00000591903 ZNF543Q08ER8 600 aa11.84□□□□□ -0.51
SDF2-209ENST00000591903 HIC1Q14526 733 aa11.84□□□□□ -0.51
SDF2-209ENST00000591903 USH1GQ495M9 461 aa11.84□□□□□ -0.51
SDF2-209ENST00000591903 GPATCH4Q5T3I0 446 aaKnown RBP11.84□□□□□ -0.51
SDF2-209ENST00000591903 ASCL5Q7RTU5 278 aa11.84□□□□□ -0.51
SDF2-209ENST00000591903 SYTL5Q8TDW5 730 aaPredicted RBP11.84□□□□□ -0.51
SDF2-209ENST00000591903 KCNB2Q92953 911 aa11.84□□□□□ -0.51
SDF2-209ENST00000591903 TAAR1Q96RJ0 339 aa11.84□□□□□ -0.51
SDF2-209ENST00000591903 CNNM2Q9H8M5 875 aa11.84□□□□□ -0.51
SDF2-209ENST00000591903 RC3H2Q9HBD1 1191 aaKnown RBP11.84□□□□□ -0.51
SDF2-209ENST00000591903 ANO2Q9NQ90 1003 aa11.84□□□□□ -0.51
SDF2-209ENST00000591903 INCENPQ9NQS7 918 aa11.84□□□□□ -0.51
SDF2-209ENST00000591903 TLR9Q9NR96 1032 aa11.84□□□□□ -0.51
SDF2-209ENST00000591903 CLEC1BQ9P126 229 aa11.84□□□□□ -0.51
SDF2-209ENST00000591903 ZNF213O14771 459 aa11.83□□□□□ -0.52
SDF2-209ENST00000591903 KDM4AO75164 1064 aa11.83□□□□□ -0.52
SDF2-209ENST00000591903 BTG3Q14201 252 aaPredicted RBP11.83□□□□□ -0.52
SDF2-209ENST00000591903 NECTIN1Q15223 517 aa11.83□□□□□ -0.52
SDF2-209ENST00000591903 PTPN21Q16825 1174 aa11.83□□□□□ -0.52
SDF2-209ENST00000591903 CELF3Q5SZQ8 465 aaKnown RBP11.83□□□□□ -0.52
SDF2-209ENST00000591903 MYSM1Q5VVJ2 828 aa11.83□□□□□ -0.52
SDF2-209ENST00000591903 MCTP2Q6DN12 878 aa11.83□□□□□ -0.52
SDF2-209ENST00000591903 SPATA33Q96N06 139 aa11.83□□□□□ -0.52
SDF2-209ENST00000591903 TTC14Q96N46 770 aa11.83□□□□□ -0.52
SDF2-209ENST00000591903 MTA3Q9BTC8 594 aa11.83□□□□□ -0.52
SDF2-209ENST00000591903 PLAGL2Q9UPG8 496 aa11.83□□□□□ -0.52
SDF2-209ENST00000591903 TRPC6Q9Y210 931 aa11.83□□□□□ -0.52
SDF2-209ENST00000591903 USP15Q9Y4E8 981 aaPredicted RBP11.83□□□□□ -0.52
SDF2-209ENST00000591903 PLXNA4Q9HCM2 1894 aa11.83□□□□□ -0.52
SDF2-209ENST00000591903 H3BRB1 525 aa11.82□□□□□ -0.52
SDF2-209ENST00000591903 TREHO43280 583 aa11.82□□□□□ -0.52
SDF2-209ENST00000591903 NR3C2P08235 984 aa11.82□□□□□ -0.52
SDF2-209ENST00000591903 CTSHP09668 335 aa11.82□□□□□ -0.52
SDF2-209ENST00000591903 SMIM10L2AP0DMW4 78 aa11.82□□□□□ -0.52
SDF2-209ENST00000591903 SMIM10L2BP0DMW5 78 aa11.82□□□□□ -0.52
SDF2-209ENST00000591903 SNHG28P0DPA3 235 aa11.82□□□□□ -0.52
SDF2-209ENST00000591903 TGFB3P10600 412 aa11.82□□□□□ -0.52
SDF2-209ENST00000591903 HSPA4P34932 840 aa11.82□□□□□ -0.52
SDF2-209ENST00000591903 ANAPC15P60006 121 aa11.82□□□□□ -0.52
SDF2-209ENST00000591903 PTH1RQ03431 593 aa11.82□□□□□ -0.52
SDF2-209ENST00000591903 KRT32Q14532 448 aa11.82□□□□□ -0.52
SDF2-209ENST00000591903 HSDL1Q3SXM5 330 aa11.82□□□□□ -0.52
SDF2-209ENST00000591903 FAM26DQ5JW98 314 aa11.82□□□□□ -0.52
SDF2-209ENST00000591903 ZNF689Q96CS4 500 aaPredicted RBP11.82□□□□□ -0.52
SDF2-209ENST00000591903 RPGRIP1Q96KN7 1286 aa11.82□□□□□ -0.52
SDF2-209ENST00000591903 RIPOR3Q96MK2 946 aa11.82□□□□□ -0.52
SDF2-209ENST00000591903 C16orf70Q9BSU1 422 aa11.82□□□□□ -0.52
SDF2-209ENST00000591903 USP26Q9BXU7 913 aa11.82□□□□□ -0.52
SDF2-209ENST00000591903 TUT1Q9H6E5 874 aaKnown RBP11.82□□□□□ -0.52
SDF2-209ENST00000591903 PXMP2Q9NR77 195 aa11.82□□□□□ -0.52
SDF2-209ENST00000591903 COL20A1Q9P218 1284 aa11.82□□□□□ -0.52
SDF2-209ENST00000591903 MRPL11Q9Y3B7 192 aaKnown RBP11.82□□□□□ -0.52
SDF2-209ENST00000591903 RBM8AQ9Y5S9 174 aaKnown RBP11.82□□□□□ -0.52
SDF2-209ENST00000591903 VPS13AQ96RL7 3174 aa11.81□□□□□ -0.52
SDF2-209ENST00000591903 EIF2AK2P19525 551 aaKnown RBP11.81□□□□□ -0.52
SDF2-209ENST00000591903 CAMK1Q14012 370 aa11.81□□□□□ -0.52
SDF2-209ENST00000591903 CDC37Q16543 378 aaPredicted RBP11.81□□□□□ -0.52
SDF2-209ENST00000591903 NKD2Q969F2 451 aaPredicted RBP11.81□□□□□ -0.52
SDF2-209ENST00000591903 TOMM22Q9NS69 142 aa11.81□□□□□ -0.52
SDF2-209ENST00000591903 DGKIO75912 1065 aa11.8□□□□□ -0.52
SDF2-209ENST00000591903 CSPG5O95196 566 aa11.8□□□□□ -0.52
SDF2-209ENST00000591903 GGPS1O95749 300 aa11.8□□□□□ -0.52
SDF2-209ENST00000591903 CYP21A2P08686 494 aa11.8□□□□□ -0.52
SDF2-209ENST00000591903 HMGB1P09429 215 aaKnown RBP11.8□□□□□ -0.52
SDF2-209ENST00000591903 SRGAP2BP0DMP2 458 aa11.8□□□□□ -0.52
SDF2-209ENST00000591903 NRIP1P48552 1158 aa11.8□□□□□ -0.52
SDF2-209ENST00000591903 CCDC178Q5BJE1 867 aa11.8□□□□□ -0.52
SDF2-209ENST00000591903 MFSD6Q6ZSS7 791 aa11.8□□□□□ -0.52
SDF2-209ENST00000591903 ADGRD2Q7Z7M1 963 aa11.8□□□□□ -0.52
SDF2-209ENST00000591903 ZBTB33Q86T24 672 aa11.8□□□□□ -0.52
SDF2-209ENST00000591903 UBALD2Q8IYN6 164 aa11.8□□□□□ -0.52
SDF2-209ENST00000591903 CMTR2Q8IYT2 770 aaKnown RBP11.8□□□□□ -0.52
SDF2-209ENST00000591903 SUSD6Q92537 303 aa11.8□□□□□ -0.52
SDF2-209ENST00000591903 TBC1D5Q92609 795 aa11.8□□□□□ -0.52
SDF2-209ENST00000591903 CDCA3Q99618 268 aaPredicted RBP11.8□□□□□ -0.52
SDF2-209ENST00000591903 BACH2Q9BYV9 841 aa11.8□□□□□ -0.52
SDF2-209ENST00000591903 KRT23Q9C075 422 aa11.8□□□□□ -0.52
SDF2-209ENST00000591903 RNPEPQ9H4A4 650 aa11.8□□□□□ -0.52
SDF2-209ENST00000591903 MLXIPQ9HAP2 919 aa11.8□□□□□ -0.52
SDF2-209ENST00000591903 UPF2Q9HAU5 1272 aaKnown RBP11.8□□□□□ -0.52
SDF2-209ENST00000591903 MAP3K20Q9NYL2 800 aaKnown RBP11.8□□□□□ -0.52
SDF2-209ENST00000591903 BARX2Q9UMQ3 279 aaPredicted RBP11.8□□□□□ -0.52
SDF2-209ENST00000591903 MYO10Q9HD67 2058 aa11.8□□□□□ -0.52
SDF2-209ENST00000591903 SLC27A2O14975 620 aa11.79□□□□□ -0.52
SDF2-209ENST00000591903 GLP2RO95838 553 aa11.79□□□□□ -0.52
SDF2-209ENST00000591903 LGALS2P05162 132 aa11.79□□□□□ -0.52
SDF2-209ENST00000591903 ITGB1P05556 798 aa11.79□□□□□ -0.52
SDF2-209ENST00000591903 UBA1P22314 1058 aaKnown RBP11.79□□□□□ -0.52
SDF2-209ENST00000591903 TRDNQ13061 729 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms