RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 NFRKBQ6P4R8 1299 aa13.1□□□□□ -0.31
VMP1-211ENST00000591315 PIK3AP1Q6ZUJ8 805 aa13.1□□□□□ -0.31
VMP1-211ENST00000591315 NIPA1Q7RTP0 329 aa13.1□□□□□ -0.31
VMP1-211ENST00000591315 DHX38Q92620 1227 aaKnown RBP13.1□□□□□ -0.31
VMP1-211ENST00000591315 LBHD1Q9BQE6 289 aaPredicted RBP13.1□□□□□ -0.31
VMP1-211ENST00000591315 NOC4LQ9BVI4 516 aaKnown RBP13.1□□□□□ -0.31
VMP1-211ENST00000591315 UBE2OQ9C0C9 1292 aaKnown RBP13.1□□□□□ -0.31
VMP1-211ENST00000591315 WNT8AQ9H1J5 351 aa13.1□□□□□ -0.31
VMP1-211ENST00000591315 RNPEPQ9H4A4 650 aa13.1□□□□□ -0.31
VMP1-211ENST00000591315 TUT1Q9H6E5 874 aaKnown RBP13.1□□□□□ -0.31
VMP1-211ENST00000591315 JPH1Q9HDC5 661 aaPredicted RBP13.1□□□□□ -0.31
VMP1-211ENST00000591315 SH2B1Q9NRF2 756 aaPredicted RBP13.1□□□□□ -0.31
VMP1-211ENST00000591315 SLC9A2Q9UBY0 812 aa13.1□□□□□ -0.31
VMP1-211ENST00000591315 TET1Q8NFU7 2136 aa13.1□□□□□ -0.31
VMP1-211ENST00000591315 MROH7Q68CQ1 1323 aa13.1□□□□□ -0.31
VMP1-211ENST00000591315 SZT2Q5T011 3432 aa13.09□□□□□ -0.31
VMP1-211ENST00000591315 IPO5O00410 1097 aaKnown RBP13.09□□□□□ -0.31
VMP1-211ENST00000591315 TLR3O15455 904 aaKnown RBP13.09□□□□□ -0.31
VMP1-211ENST00000591315 MSH4O15457 936 aa13.09□□□□□ -0.31
VMP1-211ENST00000591315 MAFGO15525 162 aa13.09□□□□□ -0.31
VMP1-211ENST00000591315 TIMP1P01033 207 aa13.09□□□□□ -0.31
VMP1-211ENST00000591315 MARK3P27448 753 aa13.09□□□□□ -0.31
VMP1-211ENST00000591315 ACTR2P61160 394 aa13.09□□□□□ -0.31
VMP1-211ENST00000591315 NONOQ15233 471 aaKnown RBP eCLIP13.09□□□□□ -0.31
VMP1-211ENST00000591315 PTGISQ16647 500 aa13.09□□□□□ -0.31
VMP1-211ENST00000591315 MCTP2Q6DN12 878 aa13.09□□□□□ -0.31
VMP1-211ENST00000591315 GALNT17Q6IS24 598 aa13.09□□□□□ -0.31
VMP1-211ENST00000591315 KRT25Q7Z3Z0 450 aa13.09□□□□□ -0.31
VMP1-211ENST00000591315 C7orf31Q8N865 590 aa13.09□□□□□ -0.31
VMP1-211ENST00000591315 GIMAP8Q8ND71 665 aaPredicted RBP13.09□□□□□ -0.31
VMP1-211ENST00000591315 SEPT1Q8WYJ6 367 aa13.09□□□□□ -0.31
VMP1-211ENST00000591315 WASF1Q92558 559 aa13.09□□□□□ -0.31
VMP1-211ENST00000591315 VWCEQ96DN2 955 aa13.09□□□□□ -0.31
VMP1-211ENST00000591315 ZBTB10Q96DT7 871 aa13.09□□□□□ -0.31
VMP1-211ENST00000591315 SDF4Q9BRK5 362 aa13.09□□□□□ -0.31
VMP1-211ENST00000591315 LLPHQ9BRT6 129 aaKnown RBP13.09□□□□□ -0.31
VMP1-211ENST00000591315 ZNF577Q9BSK1 485 aa13.09□□□□□ -0.31
VMP1-211ENST00000591315 GTF2IRD1Q9UHL9 959 aa13.09□□□□□ -0.31
VMP1-211ENST00000591315 NFASCO94856 1347 aa13.09□□□□□ -0.31
VMP1-211ENST00000591315 WDR81Q562E7 1941 aa13.08□□□□□ -0.32
VMP1-211ENST00000591315 CCDC194A0A1B0GVG4 234 aa13.08□□□□□ -0.32
VMP1-211ENST00000591315 SLC37A4O43826 429 aa13.08□□□□□ -0.32
VMP1-211ENST00000591315 MMP1P03956 469 aa13.08□□□□□ -0.32
VMP1-211ENST00000591315 SMIM10L2AP0DMW4 78 aa13.08□□□□□ -0.32
VMP1-211ENST00000591315 SMIM10L2BP0DMW5 78 aa13.08□□□□□ -0.32
VMP1-211ENST00000591315 ACRP10323 421 aa13.08□□□□□ -0.32
VMP1-211ENST00000591315 KRT2P35908 639 aa13.08□□□□□ -0.32
VMP1-211ENST00000591315 USP11P51784 963 aa13.08□□□□□ -0.32
VMP1-211ENST00000591315 LETM2Q2VYF4 491 aa13.08□□□□□ -0.32
VMP1-211ENST00000591315 C16orf59Q7L2K0 433 aa13.08□□□□□ -0.32
VMP1-211ENST00000591315 SESTD1Q86VW0 696 aa13.08□□□□□ -0.32
VMP1-211ENST00000591315 DIS3L2Q8IYB7 885 aaKnown RBP13.08□□□□□ -0.32
VMP1-211ENST00000591315 FAM177A1Q8N128 213 aaPredicted RBP13.08□□□□□ -0.32
VMP1-211ENST00000591315 SCLYQ96I15 445 aa13.08□□□□□ -0.32
VMP1-211ENST00000591315 HIPK3Q9H422 1215 aa13.08□□□□□ -0.32
VMP1-211ENST00000591315 SETD4Q9NVD3 440 aa13.08□□□□□ -0.32
VMP1-211ENST00000591315 CYP3A7-CYP3A51PA0A087WV96 503 aa13.07□□□□□ -0.32
VMP1-211ENST00000591315 SOX1O00570 391 aaPredicted RBP13.07□□□□□ -0.32
VMP1-211ENST00000591315 LGR5O75473 907 aa13.07□□□□□ -0.32
VMP1-211ENST00000591315 CSF2RAP15509 400 aa13.07□□□□□ -0.32
VMP1-211ENST00000591315 XBP1P17861 261 aa13.07□□□□□ -0.32
VMP1-211ENST00000591315 CYP3A7P24462 503 aa13.07□□□□□ -0.32
VMP1-211ENST00000591315 BMP8BP34820 402 aa13.07□□□□□ -0.32
VMP1-211ENST00000591315 PTPN11Q06124 597 aaPredicted RBP13.07□□□□□ -0.32
VMP1-211ENST00000591315 SHHQ15465 462 aa13.07□□□□□ -0.32
VMP1-211ENST00000591315 MFSD5Q6N075 450 aa13.07□□□□□ -0.32
VMP1-211ENST00000591315 GLG1Q92896 1179 aa13.07□□□□□ -0.32
VMP1-211ENST00000591315 SLC5A5Q92911 643 aa13.07□□□□□ -0.32
VMP1-211ENST00000591315 C8orf76Q96K31 380 aa13.07□□□□□ -0.32
VMP1-211ENST00000591315 MBOAT7Q96N66 472 aa13.07□□□□□ -0.32
VMP1-211ENST00000591315 KATNAL1Q9BW62 490 aa13.07□□□□□ -0.32
VMP1-211ENST00000591315 KIF28PB7ZC32 967 aa13.06□□□□□ -0.32
VMP1-211ENST00000591315 TREHO43280 583 aa13.06□□□□□ -0.32
VMP1-211ENST00000591315 ATG7O95352 703 aa13.06□□□□□ -0.32
VMP1-211ENST00000591315 SETQ01105 290 aaPredicted RBP13.06□□□□□ -0.32
VMP1-211ENST00000591315 TRIM71Q2Q1W2 868 aaKnown RBP13.06□□□□□ -0.32
VMP1-211ENST00000591315 Q4G0T1 1027 aa13.06□□□□□ -0.32
VMP1-211ENST00000591315 ABHD15Q6UXT9 468 aa13.06□□□□□ -0.32
VMP1-211ENST00000591315 NEK8Q86SG6 692 aa13.06□□□□□ -0.32
VMP1-211ENST00000591315 CCDC60Q8IWA6 550 aaPredicted RBP13.06□□□□□ -0.32
VMP1-211ENST00000591315 ETNPPLQ8TBG4 499 aa13.06□□□□□ -0.32
VMP1-211ENST00000591315 TRAPPC12Q8WVT3 735 aa13.06□□□□□ -0.32
VMP1-211ENST00000591315 SEZ6LQ9BYH1 1024 aa13.06□□□□□ -0.32
VMP1-211ENST00000591315 UNC45AQ9H3U1 944 aa13.06□□□□□ -0.32
VMP1-211ENST00000591315 DDX25Q9UHL0 483 aaKnown RBP13.06□□□□□ -0.32
VMP1-211ENST00000591315 NOD1Q9Y239 953 aa13.06□□□□□ -0.32
VMP1-211ENST00000591315 MYH9P35579 1960 aaKnown RBP13.06□□□□□ -0.32
VMP1-211ENST00000591315 IGKV6D-21A0A0A0MT36 114 aa13.05□□□□□ -0.32
VMP1-211ENST00000591315 CHMP2AO43633 222 aa13.05□□□□□ -0.32
VMP1-211ENST00000591315 SUPT20HL2P0C7V6 817 aa13.05□□□□□ -0.32
VMP1-211ENST00000591315 ATP2B1P20020 1258 aa13.05□□□□□ -0.32
VMP1-211ENST00000591315 ATP4AP20648 1035 aa13.05□□□□□ -0.32
VMP1-211ENST00000591315 HOXC8P31273 242 aa13.05□□□□□ -0.32
VMP1-211ENST00000591315 HMGN5P82970 282 aaKnown RBP13.05□□□□□ -0.32
VMP1-211ENST00000591315 FPGSQ05932 587 aa13.05□□□□□ -0.32
VMP1-211ENST00000591315 TRIM29Q14134 588 aa13.05□□□□□ -0.32
VMP1-211ENST00000591315 GPNMBQ14956 572 aa13.05□□□□□ -0.32
VMP1-211ENST00000591315 PLCB4Q15147 1175 aa13.05□□□□□ -0.32
VMP1-211ENST00000591315 SWSAP1Q6NVH7 229 aa13.05□□□□□ -0.32
VMP1-211ENST00000591315 RUFY4Q6ZNE9 571 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms