RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 CPLX2Q6PUV4 134 aaKnown RBP20.77■□□□□ 0.92
DDX39A-212ENST00000590260 PLA2G4DQ86XP0 818 aa20.77■□□□□ 0.92
DDX39A-212ENST00000590260 BLIDQ8IZY5 108 aa20.77■□□□□ 0.92
DDX39A-212ENST00000590260 TMEM199Q8N511 208 aa20.77■□□□□ 0.92
DDX39A-212ENST00000590260 C7orf31Q8N865 590 aa20.77■□□□□ 0.92
DDX39A-212ENST00000590260 RNPEPQ9H4A4 650 aa20.77■□□□□ 0.92
DDX39A-212ENST00000590260 IL23AQ9NPF7 189 aa20.77■□□□□ 0.92
DDX39A-212ENST00000590260 LGR5O75473 907 aa20.76■□□□□ 0.91
DDX39A-212ENST00000590260 SMIM10L2AP0DMW4 78 aa20.76■□□□□ 0.91
DDX39A-212ENST00000590260 SMIM10L2BP0DMW5 78 aa20.76■□□□□ 0.91
DDX39A-212ENST00000590260 ADAM17P78536 824 aa20.76■□□□□ 0.91
DDX39A-212ENST00000590260 RBL2Q08999 1139 aa20.76■□□□□ 0.91
DDX39A-212ENST00000590260 PPIGQ13427 754 aaKnown RBP eCLIP20.76■□□□□ 0.915e-7■■□□□ 11.7
DDX39A-212ENST00000590260 MCTP2Q6DN12 878 aa20.76■□□□□ 0.91
DDX39A-212ENST00000590260 ZNF365Q70YC5 407 aa20.76■□□□□ 0.91
DDX39A-212ENST00000590260 BICD2Q8TD16 824 aa20.76■□□□□ 0.91
DDX39A-212ENST00000590260 OXER1Q8TDS5 423 aa20.76■□□□□ 0.91
DDX39A-212ENST00000590260 SEPT1Q8WYJ6 367 aa20.76■□□□□ 0.91
DDX39A-212ENST00000590260 JPH1Q9HDC5 661 aaPredicted RBP20.76■□□□□ 0.91
DDX39A-212ENST00000590260 SLC9A2Q9UBY0 812 aa20.76■□□□□ 0.91
DDX39A-212ENST00000590260 PITPNM1O00562 1244 aa20.75■□□□□ 0.91
DDX39A-212ENST00000590260 CDKL5O76039 1030 aa20.75■□□□□ 0.91
DDX39A-212ENST00000590260 ATG7O95352 703 aa20.75■□□□□ 0.91
DDX39A-212ENST00000590260 IQCF3P0C7M6 154 aa20.75■□□□□ 0.91
DDX39A-212ENST00000590260 FAM109BQ6ICB4 259 aaPredicted RBP20.75■□□□□ 0.91
DDX39A-212ENST00000590260 TBCKQ8TEA7 893 aa20.75■□□□□ 0.91
DDX39A-212ENST00000590260 ORC3Q9UBD5 711 aaPredicted RBP20.75■□□□□ 0.91
DDX39A-212ENST00000590260 ZNF76P36508 570 aa20.74■□□□□ 0.91
DDX39A-212ENST00000590260 ACTR2P61160 394 aa20.74■□□□□ 0.91
DDX39A-212ENST00000590260 EARS2Q5JPH6 523 aaKnown RBP20.74■□□□□ 0.91
DDX39A-212ENST00000590260 FAM177A1Q8N128 213 aaPredicted RBP20.74■□□□□ 0.91
DDX39A-212ENST00000590260 SETD4Q9NVD3 440 aa20.74■□□□□ 0.91
DDX39A-212ENST00000590260 CXXC1Q9P0U4 656 aaPredicted RBP20.74■□□□□ 0.91
DDX39A-212ENST00000590260 EMSYQ7Z589 1322 aa20.74■□□□□ 0.91
DDX39A-212ENST00000590260 IGKV6D-21A0A0A0MT36 114 aa20.73■□□□□ 0.91
DDX39A-212ENST00000590260 DDX39AO00148 427 aaKnown RBP20.73■□□□□ 0.91
DDX39A-212ENST00000590260 TREHO43280 583 aa20.73■□□□□ 0.91
DDX39A-212ENST00000590260 PTK7Q13308 1070 aa20.73■□□□□ 0.91
DDX39A-212ENST00000590260 MBTPS1Q14703 1052 aa20.73■□□□□ 0.91
DDX39A-212ENST00000590260 TCTN1Q2MV58 587 aa20.73■□□□□ 0.91
DDX39A-212ENST00000590260 SERINC5Q86VE9 423 aa20.73■□□□□ 0.91
DDX39A-212ENST00000590260 RNPC3Q96LT9 517 aaKnown RBP20.73■□□□□ 0.91
DDX39A-212ENST00000590260 OSBPL7Q9BZF2 842 aa20.73■□□□□ 0.91
DDX39A-212ENST00000590260 LIMCH1Q9UPQ0 1083 aa20.73■□□□□ 0.91
DDX39A-212ENST00000590260 TET1Q8NFU7 2136 aa20.72■□□□□ 0.91
DDX39A-212ENST00000590260 C17orf102A2RUQ5 167 aa20.72■□□□□ 0.91
DDX39A-212ENST00000590260 FAM205CA6NFA0 338 aa20.72■□□□□ 0.91
DDX39A-212ENST00000590260 IPO5O00410 1097 aaKnown RBP20.72■□□□□ 0.91
DDX39A-212ENST00000590260 MSH4O15457 936 aa20.72■□□□□ 0.91
DDX39A-212ENST00000590260 CD2BP2O95400 341 aaKnown RBP20.72■□□□□ 0.91
DDX39A-212ENST00000590260 TDP2O95551 362 aa20.72■□□□□ 0.91
DDX39A-212ENST00000590260 CKBP12277 381 aa20.72■□□□□ 0.91
DDX39A-212ENST00000590260 PRR16Q569H4 304 aa20.72■□□□□ 0.91
DDX39A-212ENST00000590260 ABHD15Q6UXT9 468 aa20.72■□□□□ 0.91
DDX39A-212ENST00000590260 LMBR1Q8WVP7 490 aa20.72■□□□□ 0.91
DDX39A-212ENST00000590260 HERVK_113Q902F9 699 aa20.72■□□□□ 0.91
DDX39A-212ENST00000590260 TNFRSF25Q93038 417 aa20.72■□□□□ 0.91
DDX39A-212ENST00000590260 GJA10Q969M2 543 aa20.72■□□□□ 0.91
DDX39A-212ENST00000590260 MBOAT7Q96N66 472 aa20.72■□□□□ 0.91
DDX39A-212ENST00000590260 NOD1Q9Y239 953 aa20.72■□□□□ 0.91
DDX39A-212ENST00000590260 SIP14410 1827 aa20.71■□□□□ 0.91
DDX39A-212ENST00000590260 PTPRSQ13332 1948 aa20.71■□□□□ 0.91
DDX39A-212ENST00000590260 MARK3P27448 753 aa20.71■□□□□ 0.91
DDX39A-212ENST00000590260 USP11P51784 963 aa20.71■□□□□ 0.91
DDX39A-212ENST00000590260 MARCH8Q5T0T0 291 aa20.71■□□□□ 0.91
DDX39A-212ENST00000590260 GALNT17Q6IS24 598 aa20.71■□□□□ 0.91
DDX39A-212ENST00000590260 PSRC1Q6PGN9 363 aaPredicted RBP20.71■□□□□ 0.91
DDX39A-212ENST00000590260 Q7L0L9 218 aa20.71■□□□□ 0.91
DDX39A-212ENST00000590260 CCDC83Q8IWF9 413 aa20.71■□□□□ 0.91
DDX39A-212ENST00000590260 CAGE1Q8TC20 777 aa20.71■□□□□ 0.91
DDX39A-212ENST00000590260 AFAP1L1Q8TED9 768 aa20.71■□□□□ 0.91
DDX39A-212ENST00000590260 ZBTB10Q96DT7 871 aa20.71■□□□□ 0.91
DDX39A-212ENST00000590260 SDF4Q9BRK5 362 aa20.71■□□□□ 0.91
DDX39A-212ENST00000590260 ZNF577Q9BSK1 485 aa20.71■□□□□ 0.91
DDX39A-212ENST00000590260 CYP3A7-CYP3A51PA0A087WV96 503 aa20.7■□□□□ 0.9
DDX39A-212ENST00000590260 GRXCR1A8MXD5 290 aa20.7■□□□□ 0.9
DDX39A-212ENST00000590260 NBNO60934 754 aa20.7■□□□□ 0.9
DDX39A-212ENST00000590260 CYP3A7P24462 503 aa20.7■□□□□ 0.9
DDX39A-212ENST00000590260 SETQ01105 290 aaPredicted RBP20.7■□□□□ 0.9
DDX39A-212ENST00000590260 NR5A1Q13285 461 aa20.7■□□□□ 0.9
DDX39A-212ENST00000590260 BFSP2Q13515 415 aa20.7■□□□□ 0.9
DDX39A-212ENST00000590260 INF2Q27J81 1249 aa20.7■□□□□ 0.9
DDX39A-212ENST00000590260 ZNF618Q5T7W0 954 aa20.7■□□□□ 0.9
DDX39A-212ENST00000590260 OTOP2Q7RTS6 562 aa20.7■□□□□ 0.9
DDX39A-212ENST00000590260 DEFB128Q7Z7B8 93 aa20.7■□□□□ 0.9
DDX39A-212ENST00000590260 CCDC60Q8IWA6 550 aaPredicted RBP20.7■□□□□ 0.9
DDX39A-212ENST00000590260 ATP6V0A1Q93050 837 aa20.7■□□□□ 0.9
DDX39A-212ENST00000590260 ZNF215Q9UL58 517 aaPredicted RBP20.7■□□□□ 0.9
DDX39A-212ENST00000590260 WDR81Q562E7 1941 aa20.7■□□□□ 0.9
DDX39A-212ENST00000590260 GBF1Q92538 1859 aa20.69■□□□□ 0.9
DDX39A-212ENST00000590260 FGBP02675 491 aa20.69■□□□□ 0.9
DDX39A-212ENST00000590260 SELPP16109 830 aa20.69■□□□□ 0.9
DDX39A-212ENST00000590260 ATP4AP20648 1035 aa20.69■□□□□ 0.9
DDX39A-212ENST00000590260 PLCB4Q15147 1175 aa20.69■□□□□ 0.9
DDX39A-212ENST00000590260 Q4G0T1 1027 aa20.69■□□□□ 0.9
DDX39A-212ENST00000590260 GPR153Q6NV75 609 aa20.69■□□□□ 0.9
DDX39A-212ENST00000590260 RUFY4Q6ZNE9 571 aa20.69■□□□□ 0.9
DDX39A-212ENST00000590260 LRRC8DQ7L1W4 858 aa20.69■□□□□ 0.9
DDX39A-212ENST00000590260 SLC5A5Q92911 643 aa20.69■□□□□ 0.9
DDX39A-212ENST00000590260 TBC1D32Q96NH3 1257 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms