RNA–Protein interactions for RNA: ENST00000590115.1

LDLRAD4-213, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 4

Gene LDLRAD4, Length 501 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-213ENST00000590115 KCNMB3Q9NPA1 279 aa6.96□□□□□ -1.3
LDLRAD4-213ENST00000590115 MAP3K20Q9NYL2 800 aaKnown RBP6.96□□□□□ -1.3
LDLRAD4-213ENST00000590115 RTEL1Q9NZ71 1219 aa6.96□□□□□ -1.3
LDLRAD4-213ENST00000590115 SEC63Q9UGP8 760 aaKnown RBP6.96□□□□□ -1.3
LDLRAD4-213ENST00000590115 DDX41Q9UJV9 622 aaKnown RBP6.96□□□□□ -1.3
LDLRAD4-213ENST00000590115 TBX21Q9UL17 535 aa6.96□□□□□ -1.3
LDLRAD4-213ENST00000590115 PCDHB6Q9Y5E3 794 aa6.96□□□□□ -1.3
LDLRAD4-213ENST00000590115 VPS13AQ96RL7 3174 aa6.95□□□□□ -1.3
LDLRAD4-213ENST00000590115 A0A1W2PQ45 241 aaPredicted RBP6.95□□□□□ -1.3
LDLRAD4-213ENST00000590115 A0A1W2PQY0 241 aa6.95□□□□□ -1.3
LDLRAD4-213ENST00000590115 EPOPA6NHQ4 379 aa6.95□□□□□ -1.3
LDLRAD4-213ENST00000590115 EML1O00423 815 aa6.95□□□□□ -1.3
LDLRAD4-213ENST00000590115 MSH4O15457 936 aa6.95□□□□□ -1.3
LDLRAD4-213ENST00000590115 SEPT4O43236 478 aa6.95□□□□□ -1.3
LDLRAD4-213ENST00000590115 CDKL5O76039 1030 aa6.95□□□□□ -1.3
LDLRAD4-213ENST00000590115 ATP4AP20648 1035 aa6.95□□□□□ -1.3
LDLRAD4-213ENST00000590115 UBA1P22314 1058 aaKnown RBP6.95□□□□□ -1.3
LDLRAD4-213ENST00000590115 NLRP5P59047 1200 aa6.95□□□□□ -1.3
LDLRAD4-213ENST00000590115 HMGN5P82970 282 aaKnown RBP6.95□□□□□ -1.3
LDLRAD4-213ENST00000590115 AP3B2Q13367 1082 aa6.95□□□□□ -1.3
LDLRAD4-213ENST00000590115 AAK1Q2M2I8 961 aa6.95□□□□□ -1.3
LDLRAD4-213ENST00000590115 CCDC144BQ3MJ40 725 aa6.95□□□□□ -1.3
LDLRAD4-213ENST00000590115 PIK3AP1Q6ZUJ8 805 aa6.95□□□□□ -1.3
LDLRAD4-213ENST00000590115 ANKRD33Q7Z3H0 272 aa6.95□□□□□ -1.3
LDLRAD4-213ENST00000590115 DPP9Q86TI2 863 aa6.95□□□□□ -1.3
LDLRAD4-213ENST00000590115 FERMT3Q86UX7 667 aa6.95□□□□□ -1.3
LDLRAD4-213ENST00000590115 POTEDQ86YR6 584 aa6.95□□□□□ -1.3
LDLRAD4-213ENST00000590115 MCF2L2Q86YR7 1114 aa6.95□□□□□ -1.3
LDLRAD4-213ENST00000590115 FAM177A1Q8N128 213 aaPredicted RBP6.95□□□□□ -1.3
LDLRAD4-213ENST00000590115 REXO1Q8N1G1 1221 aaKnown RBP6.95□□□□□ -1.3
LDLRAD4-213ENST00000590115 MSL3Q8N5Y2 521 aaKnown RBP6.95□□□□□ -1.3
LDLRAD4-213ENST00000590115 SAMD3Q8N6K7 520 aa6.95□□□□□ -1.3
LDLRAD4-213ENST00000590115 KAT2BQ92831 832 aa6.95□□□□□ -1.3
LDLRAD4-213ENST00000590115 VWCEQ96DN2 955 aa6.95□□□□□ -1.3
LDLRAD4-213ENST00000590115 C8orf76Q96K31 380 aa6.95□□□□□ -1.3
LDLRAD4-213ENST00000590115 MXRA8Q9BRK3 442 aa6.95□□□□□ -1.3
LDLRAD4-213ENST00000590115 AGO4Q9HCK5 861 aaKnown RBP6.95□□□□□ -1.3
LDLRAD4-213ENST00000590115 JADE2Q9NQC1 790 aa6.95□□□□□ -1.3
LDLRAD4-213ENST00000590115 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.95□□□□□ -1.3
LDLRAD4-213ENST00000590115 WRAP73Q9P2S5 460 aaPredicted RBP6.95□□□□□ -1.3
LDLRAD4-213ENST00000590115 VAV3Q9UKW4 847 aa6.95□□□□□ -1.3
LDLRAD4-213ENST00000590115 SMC3Q9UQE7 1217 aa6.95□□□□□ -1.3
LDLRAD4-213ENST00000590115 NLRC5Q86WI3 1866 aa6.95□□□□□ -1.3
LDLRAD4-213ENST00000590115 SCN10AQ9Y5Y9 1956 aa6.95□□□□□ -1.3
LDLRAD4-213ENST00000590115 LOC102724159A0A0B4J2E5 919 aa6.94□□□□□ -1.3
LDLRAD4-213ENST00000590115 GSTTP1A0A1W2PQM5 241 aa6.94□□□□□ -1.3
LDLRAD4-213ENST00000590115 SORBS3O60504 671 aa6.94□□□□□ -1.3
LDLRAD4-213ENST00000590115 PSMD10O75832 226 aa6.94□□□□□ -1.3
LDLRAD4-213ENST00000590115 TIMP1P01033 207 aa6.94□□□□□ -1.3
LDLRAD4-213ENST00000590115 MYOGP15173 224 aa6.94□□□□□ -1.3
LDLRAD4-213ENST00000590115 CSF2RAP15509 400 aa6.94□□□□□ -1.3
LDLRAD4-213ENST00000590115 POU3F3P20264 500 aaPredicted RBP6.94□□□□□ -1.3
LDLRAD4-213ENST00000590115 KRT2P35908 639 aa6.94□□□□□ -1.3
LDLRAD4-213ENST00000590115 PWP2Q15269 919 aaKnown RBP6.94□□□□□ -1.3
LDLRAD4-213ENST00000590115 ECM1Q16610 540 aa6.94□□□□□ -1.3
LDLRAD4-213ENST00000590115 HSDL1Q3SXM5 330 aa6.94□□□□□ -1.3
LDLRAD4-213ENST00000590115 Q4G0T1 1027 aa6.94□□□□□ -1.3
LDLRAD4-213ENST00000590115 MYSM1Q5VVJ2 828 aa6.94□□□□□ -1.3
LDLRAD4-213ENST00000590115 MFSD5Q6N075 450 aa6.94□□□□□ -1.3
LDLRAD4-213ENST00000590115 ZNF365Q70YC5 407 aa6.94□□□□□ -1.3
LDLRAD4-213ENST00000590115 NOSTRINQ8IVI9 506 aa6.94□□□□□ -1.3
LDLRAD4-213ENST00000590115 TRIM22Q8IYM9 498 aa6.94□□□□□ -1.3
LDLRAD4-213ENST00000590115 NSUN6Q8TEA1 469 aaKnown RBP6.94□□□□□ -1.3
LDLRAD4-213ENST00000590115 HERVK_113Q902F9 699 aa6.94□□□□□ -1.3
LDLRAD4-213ENST00000590115 SLC5A5Q92911 643 aa6.94□□□□□ -1.3
LDLRAD4-213ENST00000590115 IWS1Q96ST2 819 aa6.94□□□□□ -1.3
LDLRAD4-213ENST00000590115 CEP89Q96ST8 783 aa6.94□□□□□ -1.3
LDLRAD4-213ENST00000590115 MMTAG2Q9BU76 263 aaKnown RBP6.94□□□□□ -1.3
LDLRAD4-213ENST00000590115 TSPYL2Q9H2G4 693 aaPredicted RBP6.94□□□□□ -1.3
LDLRAD4-213ENST00000590115 FOXP1Q9H334 677 aaPredicted RBP6.94□□□□□ -1.3
LDLRAD4-213ENST00000590115 C6orf50Q9HD87 102 aa6.94□□□□□ -1.3
LDLRAD4-213ENST00000590115 KCNH7Q9NS40 1196 aa6.94□□□□□ -1.3
LDLRAD4-213ENST00000590115 TMEM39AQ9NV64 488 aa6.94□□□□□ -1.3
LDLRAD4-213ENST00000590115 CLIC4Q9Y696 253 aa6.94□□□□□ -1.3
LDLRAD4-213ENST00000590115 MTCH2Q9Y6C9 303 aa6.94□□□□□ -1.3
LDLRAD4-213ENST00000590115 NCOR2Q9Y618 2525 aa6.94□□□□□ -1.3
LDLRAD4-213ENST00000590115 SYNRGQ9UMZ2 1314 aa6.94□□□□□ -1.3
LDLRAD4-213ENST00000590115 MAP1BP46821 2468 aaKnown RBP6.93□□□□□ -1.3
LDLRAD4-213ENST00000590115 ZFHX4Q86UP3 3567 aa6.93□□□□□ -1.3
LDLRAD4-213ENST00000590115 IGKV6D-21A0A0A0MT36 114 aa6.93□□□□□ -1.3
LDLRAD4-213ENST00000590115 RFXAPO00287 272 aa6.93□□□□□ -1.3
LDLRAD4-213ENST00000590115 STX6O43752 255 aa6.93□□□□□ -1.3
LDLRAD4-213ENST00000590115 EIF3JO75822 258 aaKnown RBP6.93□□□□□ -1.3
LDLRAD4-213ENST00000590115 ATG7O95352 703 aa6.93□□□□□ -1.3
LDLRAD4-213ENST00000590115 PGK1P00558 417 aa6.93□□□□□ -1.3
LDLRAD4-213ENST00000590115 MYCNP04198 464 aaPredicted RBP6.93□□□□□ -1.3
LDLRAD4-213ENST00000590115 ACRP10323 421 aa6.93□□□□□ -1.3
LDLRAD4-213ENST00000590115 MYCLP12524 364 aaPredicted RBP6.93□□□□□ -1.3
LDLRAD4-213ENST00000590115 MRPL12P52815 198 aaKnown RBP6.93□□□□□ -1.3
LDLRAD4-213ENST00000590115 RABGGTBP53611 331 aa6.93□□□□□ -1.3
LDLRAD4-213ENST00000590115 GJA9P57773 515 aa6.93□□□□□ -1.3
LDLRAD4-213ENST00000590115 BEX3Q00994 111 aa6.93□□□□□ -1.3
LDLRAD4-213ENST00000590115 RAB30Q15771 203 aa6.93□□□□□ -1.3
LDLRAD4-213ENST00000590115 UGCGQ16739 394 aa6.93□□□□□ -1.3
LDLRAD4-213ENST00000590115 DUSP28Q4G0W2 176 aa6.93□□□□□ -1.3
LDLRAD4-213ENST00000590115 CEP55Q53EZ4 464 aa6.93□□□□□ -1.3
LDLRAD4-213ENST00000590115 ARHGEF16Q5VV41 709 aa6.93□□□□□ -1.3
LDLRAD4-213ENST00000590115 LARP1BQ659C4 914 aaKnown RBP6.93□□□□□ -1.3
LDLRAD4-213ENST00000590115 PPP4R3AQ6IN85 833 aa6.93□□□□□ -1.3
LDLRAD4-213ENST00000590115 GALNT17Q6IS24 598 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms