RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 MMP3P08254 477 aa15.34■□□□□ 0.05
VMP1-210ENST00000589823 MARCKSP29966 332 aaPredicted RBP15.34■□□□□ 0.05
VMP1-210ENST00000589823 SFNP31947 248 aa15.34■□□□□ 0.05
VMP1-210ENST00000589823 FXR2P51116 673 aaKnown RBP eCLIP15.34■□□□□ 0.05
VMP1-210ENST00000589823 NKX3-2P78367 333 aa15.34■□□□□ 0.05
VMP1-210ENST00000589823 BEX3Q00994 111 aa15.34■□□□□ 0.05
VMP1-210ENST00000589823 DGKDQ16760 1214 aa15.34■□□□□ 0.05
VMP1-210ENST00000589823 GNASQ5JWF2 1037 aa15.34■□□□□ 0.05
VMP1-210ENST00000589823 MIS18BP1Q6P0N0 1132 aa15.34■□□□□ 0.05
VMP1-210ENST00000589823 RDM1Q8NG50 284 aa15.34■□□□□ 0.05
VMP1-210ENST00000589823 U2AF1L4Q8WU68 220 aaKnown RBP15.34■□□□□ 0.05
VMP1-210ENST00000589823 TNPO1Q92973 898 aaKnown RBP15.34■□□□□ 0.05
VMP1-210ENST00000589823 FERMT2Q96AC1 680 aa15.34■□□□□ 0.05
VMP1-210ENST00000589823 SPATA32Q96LK8 384 aa15.34■□□□□ 0.05
VMP1-210ENST00000589823 GPR20Q99678 358 aa15.34■□□□□ 0.05
VMP1-210ENST00000589823 SCAND2PQ9GZW5 306 aaPredicted RBP15.34■□□□□ 0.05
VMP1-210ENST00000589823 VAV3Q9UKW4 847 aa15.34■□□□□ 0.05
VMP1-210ENST00000589823 MORC2Q9Y6X9 1032 aaPredicted RBP15.34■□□□□ 0.05
VMP1-210ENST00000589823 CENPFP49454 3210 aa15.34■□□□□ 0.05
VMP1-210ENST00000589823 VWA3AA6NCI4 1184 aa15.33■□□□□ 0.04
VMP1-210ENST00000589823 KBTBD13C9JR72 458 aa15.33■□□□□ 0.04
VMP1-210ENST00000589823 KPNA6O60684 536 aa15.33■□□□□ 0.04
VMP1-210ENST00000589823 PPP6R2O75170 966 aa15.33■□□□□ 0.04
VMP1-210ENST00000589823 PPFIA4O75335 1185 aa15.33■□□□□ 0.04
VMP1-210ENST00000589823 CCNE2O96020 404 aa15.33■□□□□ 0.04
VMP1-210ENST00000589823 PSAPP07602 524 aa15.33■□□□□ 0.04
VMP1-210ENST00000589823 CAPN2P17655 700 aa15.33■□□□□ 0.04
VMP1-210ENST00000589823 CST5P28325 142 aaPredicted RBP15.33■□□□□ 0.04
VMP1-210ENST00000589823 TCF7P36402 384 aaPredicted RBP15.33■□□□□ 0.04
VMP1-210ENST00000589823 GJA8P48165 433 aa15.33■□□□□ 0.04
VMP1-210ENST00000589823 PDIA5Q14554 519 aa15.33■□□□□ 0.04
VMP1-210ENST00000589823 LRRC41Q15345 812 aa15.33■□□□□ 0.04
VMP1-210ENST00000589823 B3GNT9Q6UX72 402 aa15.33■□□□□ 0.04
VMP1-210ENST00000589823 PCSK9Q8NBP7 692 aaKnown RBP15.33■□□□□ 0.04
VMP1-210ENST00000589823 KLHDC9Q8NEP7 349 aa15.33■□□□□ 0.04
VMP1-210ENST00000589823 AZI2Q9H6S1 392 aa15.33■□□□□ 0.04
VMP1-210ENST00000589823 DISC1Q9NRI5 854 aa15.33■□□□□ 0.04
VMP1-210ENST00000589823 LRWD1Q9UFC0 647 aa15.33■□□□□ 0.04
VMP1-210ENST00000589823 RCOR1Q9UKL0 485 aa15.33■□□□□ 0.04
VMP1-210ENST00000589823 OGDHLQ9ULD0 1010 aa15.33■□□□□ 0.04
VMP1-210ENST00000589823 PCDHA10Q9Y5I2 948 aa15.33■□□□□ 0.04
VMP1-210ENST00000589823 SRPRBQ9Y5M8 271 aaKnown RBP15.33■□□□□ 0.04
VMP1-210ENST00000589823 STK24Q9Y6E0 443 aa15.33■□□□□ 0.04
VMP1-210ENST00000589823 GSTTP1A0A1W2PQM5 241 aa15.32■□□□□ 0.04
VMP1-210ENST00000589823 POTEFA5A3E0 1075 aa15.32■□□□□ 0.04
VMP1-210ENST00000589823 MYADML2A6NDP7 307 aa15.32■□□□□ 0.04
VMP1-210ENST00000589823 POTEMA6NI47 508 aa15.32■□□□□ 0.04
VMP1-210ENST00000589823 BACH1O14867 736 aa15.32■□□□□ 0.04
VMP1-210ENST00000589823 ATG7O95352 703 aa15.32■□□□□ 0.04
VMP1-210ENST00000589823 MYL3P08590 195 aa15.32■□□□□ 0.04
VMP1-210ENST00000589823 SUPT20HL2P0C7V6 817 aa15.32■□□□□ 0.04
VMP1-210ENST00000589823 LONP1P36776 959 aaKnown RBP15.32■□□□□ 0.04
VMP1-210ENST00000589823 IRX5P78411 483 aaPredicted RBP15.32■□□□□ 0.04
VMP1-210ENST00000589823 SPIRE1Q08AE8 756 aa15.32■□□□□ 0.04
VMP1-210ENST00000589823 EPHA7Q15375 998 aa15.32■□□□□ 0.04
VMP1-210ENST00000589823 UTP14CQ5TAP6 766 aaKnown RBP15.32■□□□□ 0.04
VMP1-210ENST00000589823 FAM160B1Q5W0V3 765 aa15.32■□□□□ 0.04
VMP1-210ENST00000589823 ABHD15Q6UXT9 468 aa15.32■□□□□ 0.04
VMP1-210ENST00000589823 KRI1Q8N9T8 703 aaKnown RBP15.32■□□□□ 0.04
VMP1-210ENST00000589823 ERMNQ8TAM6 284 aa15.32■□□□□ 0.04
VMP1-210ENST00000589823 LEO1Q8WVC0 666 aaPredicted RBP15.32■□□□□ 0.04
VMP1-210ENST00000589823 CHAMP1Q96JM3 812 aa15.32■□□□□ 0.04
VMP1-210ENST00000589823 TSEN34Q9BSV6 310 aaKnown RBP15.32■□□□□ 0.04
VMP1-210ENST00000589823 CRISPLD2Q9H0B8 497 aa15.32■□□□□ 0.04
VMP1-210ENST00000589823 TELO2Q9Y4R8 837 aa15.32■□□□□ 0.04
VMP1-210ENST00000589823 EML1O00423 815 aa15.31■□□□□ 0.04
VMP1-210ENST00000589823 DNM1LO00429 736 aa15.31■□□□□ 0.04
VMP1-210ENST00000589823 CTAGE5O15320 804 aa15.31■□□□□ 0.04
VMP1-210ENST00000589823 ME1P48163 572 aa15.31■□□□□ 0.04
VMP1-210ENST00000589823 KCNA10Q16322 511 aa15.31■□□□□ 0.04
VMP1-210ENST00000589823 IL17AQ16552 155 aa15.31■□□□□ 0.04
VMP1-210ENST00000589823 CSPP1Q1MSJ5 1256 aa15.31■□□□□ 0.04
VMP1-210ENST00000589823 IGSF22Q8N9C0 903 aa15.31■□□□□ 0.04
VMP1-210ENST00000589823 GLG1Q92896 1179 aa15.31■□□□□ 0.04
VMP1-210ENST00000589823 AK8Q96MA6 479 aa15.31■□□□□ 0.04
VMP1-210ENST00000589823 FBXO2Q9UK22 296 aaPredicted RBP15.31■□□□□ 0.04
VMP1-210ENST00000589823 DOCK5Q9H7D0 1870 aa15.31■□□□□ 0.04
VMP1-210ENST00000589823 MOXD2PA6NHM9 499 aa15.3■□□□□ 0.04
VMP1-210ENST00000589823 DKC1O60832 514 aaKnown RBP eCLIP15.3■□□□□ 0.04
VMP1-210ENST00000589823 CUTAO60888 179 aa15.3■□□□□ 0.04
VMP1-210ENST00000589823 LGALS2P05162 132 aa15.3■□□□□ 0.04
VMP1-210ENST00000589823 ASGR1P07306 291 aa15.3■□□□□ 0.04
VMP1-210ENST00000589823 HOXD8P13378 290 aaPredicted RBP15.3■□□□□ 0.04
VMP1-210ENST00000589823 KRT79Q5XKE5 535 aa15.3■□□□□ 0.04
VMP1-210ENST00000589823 HAUS3Q68CZ6 603 aa15.3■□□□□ 0.04
VMP1-210ENST00000589823 SWSAP1Q6NVH7 229 aa15.3■□□□□ 0.04
VMP1-210ENST00000589823 EMSYQ7Z589 1322 aa15.3■□□□□ 0.04
VMP1-210ENST00000589823 TNS4Q8IZW8 715 aa15.3■□□□□ 0.04
VMP1-210ENST00000589823 ANKLE1Q8NAG6 615 aa15.3■□□□□ 0.04
VMP1-210ENST00000589823 NEK9Q8TD19 979 aa15.3■□□□□ 0.04
VMP1-210ENST00000589823 ATP6V0A1Q93050 837 aa15.3■□□□□ 0.04
VMP1-210ENST00000589823 ABHD8Q96I13 439 aa15.3■□□□□ 0.04
VMP1-210ENST00000589823 CLIC6Q96NY7 704 aa15.3■□□□□ 0.04
VMP1-210ENST00000589823 EIF2AK1Q9BQI3 630 aaKnown RBP15.3■□□□□ 0.04
VMP1-210ENST00000589823 MTG1Q9BT17 334 aaPredicted RBP15.3■□□□□ 0.04
VMP1-210ENST00000589823 KATNAL1Q9BW62 490 aa15.3■□□□□ 0.04
VMP1-210ENST00000589823 SMARCAD1Q9H4L7 1026 aa15.3■□□□□ 0.04
VMP1-210ENST00000589823 GDPD2Q9HCC8 539 aa15.3■□□□□ 0.04
VMP1-210ENST00000589823 ZNF302Q9NR11 478 aa15.3■□□□□ 0.04
VMP1-210ENST00000589823 GABBR1Q9UBS5 961 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms