RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 SLFN12Q8IYM2 578 aa21.43■■□□□ 1.02
CLPTM1-209ENST00000588855 C4orf32Q8N8J7 132 aa21.43■■□□□ 1.02
CLPTM1-209ENST00000588855 SEPT1Q8WYJ6 367 aa21.43■■□□□ 1.02
CLPTM1-209ENST00000588855 UNC45AQ9H3U1 944 aa21.43■■□□□ 1.02
CLPTM1-209ENST00000588855 POLR3EQ9NVU0 708 aa21.43■■□□□ 1.02
CLPTM1-209ENST00000588855 VAV3Q9UKW4 847 aa21.43■■□□□ 1.02
CLPTM1-209ENST00000588855 CHMP2AO43633 222 aa21.42■■□□□ 1.02
CLPTM1-209ENST00000588855 BAG4O95429 457 aaKnown RBP21.42■■□□□ 1.02
CLPTM1-209ENST00000588855 OR52Z1P0C646 297 aa21.42■■□□□ 1.02
CLPTM1-209ENST00000588855 COL6A1P12109 1028 aa21.42■■□□□ 1.02
CLPTM1-209ENST00000588855 PTGDRQ13258 359 aa21.42■■□□□ 1.02
CLPTM1-209ENST00000588855 ZNF746Q6NUN9 644 aaPredicted RBP21.42■■□□□ 1.02
CLPTM1-209ENST00000588855 UBE2Q1Q7Z7E8 422 aa21.42■■□□□ 1.02
CLPTM1-209ENST00000588855 FTOQ9C0B1 505 aaKnown RBP eCLIP21.42■■□□□ 1.02
CLPTM1-209ENST00000588855 TCEAL9Q9UHQ7 104 aa21.42■■□□□ 1.02
CLPTM1-209ENST00000588855 PPFIA4O75335 1185 aa21.41■■□□□ 1.02
CLPTM1-209ENST00000588855 LGALS2P05162 132 aa21.41■■□□□ 1.02
CLPTM1-209ENST00000588855 TXKP42681 527 aa21.41■■□□□ 1.02
CLPTM1-209ENST00000588855 UTP14CQ5TAP6 766 aaKnown RBP21.41■■□□□ 1.02
CLPTM1-209ENST00000588855 B3GNT9Q6UX72 402 aa21.41■■□□□ 1.02
CLPTM1-209ENST00000588855 TRIM50Q86XT4 487 aa21.41■■□□□ 1.02
CLPTM1-209ENST00000588855 SENP6Q9GZR1 1112 aaPredicted RBP21.41■■□□□ 1.02
CLPTM1-209ENST00000588855 KPNA6O60684 536 aa21.4■■□□□ 1.02
CLPTM1-209ENST00000588855 FOXD4L6Q3SYB3 417 aaPredicted RBP21.4■■□□□ 1.02
CLPTM1-209ENST00000588855 FOXD4L3Q6VB84 417 aaPredicted RBP21.4■■□□□ 1.02
CLPTM1-209ENST00000588855 NECAB2Q7Z6G3 386 aa21.4■■□□□ 1.02
CLPTM1-209ENST00000588855 MTG1Q9BT17 334 aaPredicted RBP21.4■■□□□ 1.02
CLPTM1-209ENST00000588855 C11orf49Q9H6J7 331 aa21.4■■□□□ 1.02
CLPTM1-209ENST00000588855 TTC12Q9H892 705 aaPredicted RBP21.4■■□□□ 1.02
CLPTM1-209ENST00000588855 MYH9P35579 1960 aaKnown RBP21.4■■□□□ 1.02
CLPTM1-209ENST00000588855 WDR64B1ANS9 1081 aa21.39■■□□□ 1.02
CLPTM1-209ENST00000588855 ATG7O95352 703 aa21.39■■□□□ 1.02
CLPTM1-209ENST00000588855 PSMC6P62333 389 aa21.39■■□□□ 1.02
CLPTM1-209ENST00000588855 SPIRE1Q08AE8 756 aa21.39■■□□□ 1.02
CLPTM1-209ENST00000588855 PPP2R5CQ13362 524 aa21.39■■□□□ 1.02
CLPTM1-209ENST00000588855 SF3A1Q15459 793 aaKnown RBP21.39■■□□□ 1.02
CLPTM1-209ENST00000588855 ABHD15Q6UXT9 468 aa21.39■■□□□ 1.02
CLPTM1-209ENST00000588855 SMAP1Q8IYB5 467 aaPredicted RBP21.39■■□□□ 1.02
CLPTM1-209ENST00000588855 KAT2BQ92831 832 aa21.39■■□□□ 1.02
CLPTM1-209ENST00000588855 GLT1D1Q96MS3 346 aa21.39■■□□□ 1.02
CLPTM1-209ENST00000588855 USP28Q96RU2 1077 aa21.39■■□□□ 1.02
CLPTM1-209ENST00000588855 PCYT2Q99447 389 aa21.39■■□□□ 1.02
CLPTM1-209ENST00000588855 C16orf70Q9BSU1 422 aa21.39■■□□□ 1.02
CLPTM1-209ENST00000588855 PCDHA12Q9UN75 941 aa21.39■■□□□ 1.02
CLPTM1-209ENST00000588855 SAMM50Q9Y512 469 aa21.39■■□□□ 1.02
CLPTM1-209ENST00000588855 CLIC4Q9Y696 253 aa21.39■■□□□ 1.02
CLPTM1-209ENST00000588855 EML1O00423 815 aa21.39■■□□□ 1.01
CLPTM1-209ENST00000588855 F2P00734 622 aa21.39■■□□□ 1.01
CLPTM1-209ENST00000588855 SUPT20HL2P0C7V6 817 aa21.39■■□□□ 1.01
CLPTM1-209ENST00000588855 ATP2C1P98194 919 aaPredicted RBP21.39■■□□□ 1.01
CLPTM1-209ENST00000588855 MIER3Q7Z3K6 550 aa21.39■■□□□ 1.01
CLPTM1-209ENST00000588855 STARD7Q9NQZ5 370 aa21.39■■□□□ 1.01
CLPTM1-209ENST00000588855 DISC1Q9NRI5 854 aa21.39■■□□□ 1.01
CLPTM1-209ENST00000588855 ALPK3Q96L96 1907 aa21.39■■□□□ 1.01
CLPTM1-209ENST00000588855 EMSYQ7Z589 1322 aa21.38■■□□□ 1.01
CLPTM1-209ENST00000588855 LAD1O00515 517 aa21.38■■□□□ 1.01
CLPTM1-209ENST00000588855 LGR5O75473 907 aa21.38■■□□□ 1.01
CLPTM1-209ENST00000588855 CAPN15O75808 1086 aa21.38■■□□□ 1.01
CLPTM1-209ENST00000588855 CABYRO75952 493 aa21.38■■□□□ 1.01
CLPTM1-209ENST00000588855 JAK3P52333 1124 aa21.38■■□□□ 1.01
CLPTM1-209ENST00000588855 NCAPH2Q6IBW4 605 aa21.38■■□□□ 1.01
CLPTM1-209ENST00000588855 MIS18BP1Q6P0N0 1132 aa21.38■■□□□ 1.01
CLPTM1-209ENST00000588855 CCDC60Q8IWA6 550 aaPredicted RBP21.38■■□□□ 1.01
CLPTM1-209ENST00000588855 PPP1R13LQ8WUF5 828 aa21.38■■□□□ 1.01
CLPTM1-209ENST00000588855 VTI1AQ96AJ9 217 aa21.38■■□□□ 1.01
CLPTM1-209ENST00000588855 PCDHA10Q9Y5I2 948 aa21.38■■□□□ 1.01
CLPTM1-209ENST00000588855 IGKV6D-21A0A0A0MT36 114 aa21.37■■□□□ 1.01
CLPTM1-209ENST00000588855 POTEMA6NI47 508 aa21.37■■□□□ 1.01
CLPTM1-209ENST00000588855 PSAPP07602 524 aa21.37■■□□□ 1.01
CLPTM1-209ENST00000588855 SFNP31947 248 aa21.37■■□□□ 1.01
CLPTM1-209ENST00000588855 ATN1P54259 1190 aaPredicted RBP21.37■■□□□ 1.01
CLPTM1-209ENST00000588855 CHMP4BP1P59074 171 aa21.37■■□□□ 1.01
CLPTM1-209ENST00000588855 NUCB2P80303 420 aa21.37■■□□□ 1.01
CLPTM1-209ENST00000588855 CEBPZQ03701 1054 aaKnown RBP21.37■■□□□ 1.01
CLPTM1-209ENST00000588855 IPO9Q96P70 1041 aaKnown RBP21.37■■□□□ 1.01
CLPTM1-209ENST00000588855 GRIN2DO15399 1336 aa21.37■■□□□ 1.01
CLPTM1-209ENST00000588855 H3BRB1 525 aa21.36■■□□□ 1.01
CLPTM1-209ENST00000588855 BACH1O14867 736 aa21.36■■□□□ 1.01
CLPTM1-209ENST00000588855 PRPHP41219 470 aa21.36■■□□□ 1.01
CLPTM1-209ENST00000588855 TECP42680 631 aa21.36■■□□□ 1.01
CLPTM1-209ENST00000588855 PSEN2P49810 448 aa21.36■■□□□ 1.01
CLPTM1-209ENST00000588855 MFSD10Q14728 455 aa21.36■■□□□ 1.01
CLPTM1-209ENST00000588855 PTPAQ15257 358 aa21.36■■□□□ 1.01
CLPTM1-209ENST00000588855 SWSAP1Q6NVH7 229 aa21.36■■□□□ 1.01
CLPTM1-209ENST00000588855 RDM1Q8NG50 284 aa21.36■■□□□ 1.01
CLPTM1-209ENST00000588855 GLG1Q92896 1179 aa21.36■■□□□ 1.01
CLPTM1-209ENST00000588855 TUT1Q9H6E5 874 aaKnown RBP21.36■■□□□ 1.01
CLPTM1-209ENST00000588855 AZI2Q9H6S1 392 aa21.36■■□□□ 1.01
CLPTM1-209ENST00000588855 CEP131Q9UPN4 1083 aa21.36■■□□□ 1.01
CLPTM1-209ENST00000588855 HAS3O00219 553 aa21.35■■□□□ 1.01
CLPTM1-209ENST00000588855 BMP15O95972 392 aa21.35■■□□□ 1.01
CLPTM1-209ENST00000588855 MARK3P27448 753 aa21.35■■□□□ 1.01
CLPTM1-209ENST00000588855 IL17AQ16552 155 aa21.35■■□□□ 1.01
CLPTM1-209ENST00000588855 UGCGQ16739 394 aa21.35■■□□□ 1.01
CLPTM1-209ENST00000588855 KIAA0753Q2KHM9 967 aa21.35■■□□□ 1.01
CLPTM1-209ENST00000588855 ZNF396Q96N95 335 aaPredicted RBP21.35■■□□□ 1.01
CLPTM1-209ENST00000588855 KATNAL1Q9BW62 490 aa21.35■■□□□ 1.01
CLPTM1-209ENST00000588855 SMARCAD1Q9H4L7 1026 aa21.35■■□□□ 1.01
CLPTM1-209ENST00000588855 ZNF302Q9NR11 478 aa21.35■■□□□ 1.01
CLPTM1-209ENST00000588855 TFIP11Q9UBB9 837 aaKnown RBP21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms