RNA–Protein interactions for RNA: ENST00000588667.5

ATG4D-208, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,619 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-208ENST00000588667 F2P00734 622 aa22.78■■□□□ 1.24
ATG4D-208ENST00000588667 ZNF286BP0CG31 522 aa22.78■■□□□ 1.24
ATG4D-208ENST00000588667 U2AF2P26368 475 aaKnown RBP eCLIP22.78■■□□□ 1.24
ATG4D-208ENST00000588667 PSMC6P62333 389 aa22.78■■□□□ 1.24
ATG4D-208ENST00000588667 RESTQ13127 1097 aa22.78■■□□□ 1.24
ATG4D-208ENST00000588667 ITGA7Q13683 1181 aa22.78■■□□□ 1.24
ATG4D-208ENST00000588667 KATNAL1Q9BW62 490 aa22.78■■□□□ 1.24
ATG4D-208ENST00000588667 MROH7Q68CQ1 1323 aa22.77■■□□□ 1.24
ATG4D-208ENST00000588667 ARVCFO00192 962 aa22.77■■□□□ 1.24
ATG4D-208ENST00000588667 DHX15O43143 795 aaKnown RBP22.77■■□□□ 1.24
ATG4D-208ENST00000588667 TRIM60Q495X7 471 aa22.77■■□□□ 1.24
ATG4D-208ENST00000588667 SLC43A3Q8NBI5 491 aa22.77■■□□□ 1.24
ATG4D-208ENST00000588667 SEPT1Q8WYJ6 367 aa22.77■■□□□ 1.24
ATG4D-208ENST00000588667 KAT2BQ92831 832 aa22.77■■□□□ 1.24
ATG4D-208ENST00000588667 ATP11BQ9Y2G3 1177 aa22.77■■□□□ 1.24
ATG4D-208ENST00000588667 TELO2Q9Y4R8 837 aa22.77■■□□□ 1.24
ATG4D-208ENST00000588667 GRIN2DO15399 1336 aa22.76■■□□□ 1.23
ATG4D-208ENST00000588667 KIF28PB7ZC32 967 aa22.76■■□□□ 1.23
ATG4D-208ENST00000588667 SLC37A4O43826 429 aa22.76■■□□□ 1.23
ATG4D-208ENST00000588667 LGALS2P05162 132 aa22.76■■□□□ 1.23
ATG4D-208ENST00000588667 SLC5A5Q92911 643 aa22.76■■□□□ 1.23
ATG4D-208ENST00000588667 RIT2Q99578 217 aa22.76■■□□□ 1.23
ATG4D-208ENST00000588667 C16orf70Q9BSU1 422 aa22.76■■□□□ 1.23
ATG4D-208ENST00000588667 TCEAL9Q9UHQ7 104 aa22.76■■□□□ 1.23
ATG4D-208ENST00000588667 WDR81Q562E7 1941 aa22.76■■□□□ 1.23
ATG4D-208ENST00000588667 TCF7P36402 384 aaPredicted RBP22.75■■□□□ 1.23
ATG4D-208ENST00000588667 CDK7P50613 346 aa22.75■■□□□ 1.23
ATG4D-208ENST00000588667 ACTR2P61160 394 aa22.75■■□□□ 1.23
ATG4D-208ENST00000588667 CSPP1Q1MSJ5 1256 aa22.75■■□□□ 1.23
ATG4D-208ENST00000588667 ANKRD33Q7Z3H0 272 aa22.75■■□□□ 1.23
ATG4D-208ENST00000588667 ETNPPLQ8TBG4 499 aa22.75■■□□□ 1.23
ATG4D-208ENST00000588667 UIMC1Q96RL1 719 aa22.75■■□□□ 1.23
ATG4D-208ENST00000588667 MYH9P35579 1960 aaKnown RBP22.75■■□□□ 1.23
ATG4D-208ENST00000588667 GSTTP1A0A1W2PQM5 241 aa22.75■■□□□ 1.23
ATG4D-208ENST00000588667 DDX39AO00148 427 aaKnown RBP22.75■■□□□ 1.23
ATG4D-208ENST00000588667 NCLP19338 710 aaKnown RBP22.75■■□□□ 1.23
ATG4D-208ENST00000588667 KRT85P78386 507 aa22.75■■□□□ 1.23
ATG4D-208ENST00000588667 DNM1Q05193 864 aaKnown RBP22.75■■□□□ 1.23
ATG4D-208ENST00000588667 NBPF20Q3BBV1 942 aa22.75■■□□□ 1.23
ATG4D-208ENST00000588667 NFRKBQ6P4R8 1299 aa22.75■■□□□ 1.23
ATG4D-208ENST00000588667 C7orf61Q8IZ16 206 aa22.75■■□□□ 1.23
ATG4D-208ENST00000588667 CHAMP1Q96JM3 812 aa22.75■■□□□ 1.23
ATG4D-208ENST00000588667 TOX2Q96NM4 488 aa22.75■■□□□ 1.23
ATG4D-208ENST00000588667 NR2E3Q9Y5X4 410 aa22.75■■□□□ 1.23
ATG4D-208ENST00000588667 KAT6AQ92794 2004 aa22.74■■□□□ 1.23
ATG4D-208ENST00000588667 HAS3O00219 553 aa22.74■■□□□ 1.23
ATG4D-208ENST00000588667 PQBP1O60828 265 aaKnown RBP22.74■■□□□ 1.23
ATG4D-208ENST00000588667 GAS7O60861 476 aa22.74■■□□□ 1.23
ATG4D-208ENST00000588667 CCNE2O96020 404 aa22.74■■□□□ 1.23
ATG4D-208ENST00000588667 PSEN2P49810 448 aa22.74■■□□□ 1.23
ATG4D-208ENST00000588667 KRT76Q01546 638 aa22.74■■□□□ 1.23
ATG4D-208ENST00000588667 TLE2Q04725 743 aa22.74■■□□□ 1.23
ATG4D-208ENST00000588667 LRCH2Q5VUJ6 765 aa22.74■■□□□ 1.23
ATG4D-208ENST00000588667 ZNF746Q6NUN9 644 aaPredicted RBP22.74■■□□□ 1.23
ATG4D-208ENST00000588667 KCNMB3Q9NPA1 279 aa22.74■■□□□ 1.23
ATG4D-208ENST00000588667 ZNF215Q9UL58 517 aaPredicted RBP22.74■■□□□ 1.23
ATG4D-208ENST00000588667 EMSYQ7Z589 1322 aa22.73■■□□□ 1.23
ATG4D-208ENST00000588667 H3BRB1 525 aa22.73■■□□□ 1.23
ATG4D-208ENST00000588667 TBX3O15119 743 aa22.73■■□□□ 1.23
ATG4D-208ENST00000588667 TRAPPC10P48553 1259 aa22.73■■□□□ 1.23
ATG4D-208ENST00000588667 MFSD10Q14728 455 aa22.73■■□□□ 1.23
ATG4D-208ENST00000588667 SKOR2Q2VWA4 1001 aaPredicted RBP22.73■■□□□ 1.23
ATG4D-208ENST00000588667 UTP14CQ5TAP6 766 aaKnown RBP22.73■■□□□ 1.23
ATG4D-208ENST00000588667 BRAPQ7Z569 592 aa22.73■■□□□ 1.23
ATG4D-208ENST00000588667 TRIM50Q86XT4 487 aa22.73■■□□□ 1.23
ATG4D-208ENST00000588667 POTEDQ86YR6 584 aa22.73■■□□□ 1.23
ATG4D-208ENST00000588667 FAM20AQ96MK3 541 aa22.73■■□□□ 1.23
ATG4D-208ENST00000588667 TEKT3Q9BXF9 490 aa22.73■■□□□ 1.23
ATG4D-208ENST00000588667 TUT1Q9H6E5 874 aaKnown RBP22.73■■□□□ 1.23
ATG4D-208ENST00000588667 NOL7Q9UMY1 257 aaKnown RBP22.73■■□□□ 1.23
ATG4D-208ENST00000588667 DCDC2CA8MYV0 355 aa22.72■■□□□ 1.23
ATG4D-208ENST00000588667 WNT7AO00755 349 aa22.72■■□□□ 1.23
ATG4D-208ENST00000588667 PRPF40AO75400 957 aaKnown RBP22.72■■□□□ 1.23
ATG4D-208ENST00000588667 PSMD10O75832 226 aa22.72■■□□□ 1.23
ATG4D-208ENST00000588667 ATG7O95352 703 aa22.72■■□□□ 1.23
ATG4D-208ENST00000588667 PTPN11Q06124 597 aaPredicted RBP22.72■■□□□ 1.23
ATG4D-208ENST00000588667 KIAA0753Q2KHM9 967 aa22.72■■□□□ 1.23
ATG4D-208ENST00000588667 FAM126BQ8IXS8 530 aa22.72■■□□□ 1.23
ATG4D-208ENST00000588667 SMAP1Q8IYB5 467 aaPredicted RBP22.72■■□□□ 1.23
ATG4D-208ENST00000588667 NEMFO60524 1076 aa22.71■■□□□ 1.23
ATG4D-208ENST00000588667 LGR5O75473 907 aa22.71■■□□□ 1.23
ATG4D-208ENST00000588667 CHMP4BP1P59074 171 aa22.71■■□□□ 1.23
ATG4D-208ENST00000588667 ORC2Q13416 577 aaPredicted RBP22.71■■□□□ 1.23
ATG4D-208ENST00000588667 ATL3Q6DD88 541 aa22.71■■□□□ 1.23
ATG4D-208ENST00000588667 SESTD1Q86VW0 696 aa22.71■■□□□ 1.23
ATG4D-208ENST00000588667 TMEM87AQ8NBN3 555 aa22.71■■□□□ 1.23
ATG4D-208ENST00000588667 GJA10Q969M2 543 aa22.71■■□□□ 1.23
ATG4D-208ENST00000588667 LMBRD1Q9NUN5 540 aa22.71■■□□□ 1.23
ATG4D-208ENST00000588667 TLR3O15455 904 aaKnown RBP22.71■■□□□ 1.23
ATG4D-208ENST00000588667 FAM47CQ5HY64 1035 aa22.71■■□□□ 1.23
ATG4D-208ENST00000588667 FAM173BQ6P4H8 233 aa22.71■■□□□ 1.23
ATG4D-208ENST00000588667 ABHD15Q6UXT9 468 aa22.71■■□□□ 1.23
ATG4D-208ENST00000588667 ZNF396Q96N95 335 aaPredicted RBP22.71■■□□□ 1.23
ATG4D-208ENST00000588667 SCAND2PQ9GZW5 306 aaPredicted RBP22.71■■□□□ 1.23
ATG4D-208ENST00000588667 SMARCAD1Q9H4L7 1026 aa22.71■■□□□ 1.23
ATG4D-208ENST00000588667 AZI2Q9H6S1 392 aa22.71■■□□□ 1.23
ATG4D-208ENST00000588667 CFAP45Q9UL16 551 aa22.71■■□□□ 1.23
ATG4D-208ENST00000588667 TRIP12Q14669 1992 aaPredicted RBP22.7■■□□□ 1.22
ATG4D-208ENST00000588667 TRAK2O60296 914 aa22.7■■□□□ 1.22
ATG4D-208ENST00000588667 CLTBP09497 229 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms