RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 PPP2R5CQ13362 524 aa12.08□□□□□ -0.48
SMARCA4-213ENST00000587988 ZNF746Q6NUN9 644 aaPredicted RBP12.08□□□□□ -0.48
SMARCA4-213ENST00000587988 RNF180Q86T96 592 aa12.08□□□□□ -0.48
SMARCA4-213ENST00000587988 ARRDC4Q8NCT1 418 aa12.08□□□□□ -0.48
SMARCA4-213ENST00000587988 SEPT1Q8WYJ6 367 aa12.08□□□□□ -0.48
SMARCA4-213ENST00000587988 ZNF396Q96N95 335 aaPredicted RBP12.08□□□□□ -0.48
SMARCA4-213ENST00000587988 PCYT2Q99447 389 aa12.08□□□□□ -0.48
SMARCA4-213ENST00000587988 POLR3EQ9NVU0 708 aa12.08□□□□□ -0.48
SMARCA4-213ENST00000587988 CHMP5Q9NZZ3 219 aa12.08□□□□□ -0.48
SMARCA4-213ENST00000587988 PCDHA12Q9UN75 941 aa12.08□□□□□ -0.48
SMARCA4-213ENST00000587988 ELP1O95163 1332 aa12.08□□□□□ -0.48
SMARCA4-213ENST00000587988 TCHHQ07283 1943 aa12.07□□□□□ -0.48
SMARCA4-213ENST00000587988 KIAA0100Q14667 2235 aaKnown RBP12.07□□□□□ -0.48
SMARCA4-213ENST00000587988 POTEMA6NI47 508 aa12.07□□□□□ -0.48
SMARCA4-213ENST00000587988 PPFIA4O75335 1185 aa12.07□□□□□ -0.48
SMARCA4-213ENST00000587988 ZNF286BP0CG31 522 aa12.07□□□□□ -0.48
SMARCA4-213ENST00000587988 MARCKSP29966 332 aaPredicted RBP12.07□□□□□ -0.48
SMARCA4-213ENST00000587988 TCF7P36402 384 aaPredicted RBP12.07□□□□□ -0.48
SMARCA4-213ENST00000587988 NASPP49321 788 aaPredicted RBP12.07□□□□□ -0.48
SMARCA4-213ENST00000587988 KRT76Q01546 638 aa12.07□□□□□ -0.48
SMARCA4-213ENST00000587988 GRIN1Q05586 938 aa12.07□□□□□ -0.48
SMARCA4-213ENST00000587988 DGKDQ16760 1214 aa12.07□□□□□ -0.48
SMARCA4-213ENST00000587988 UTP14CQ5TAP6 766 aaKnown RBP12.07□□□□□ -0.48
SMARCA4-213ENST00000587988 CXCL17Q6UXB2 119 aa12.07□□□□□ -0.48
SMARCA4-213ENST00000587988 ABHD15Q6UXT9 468 aa12.07□□□□□ -0.48
SMARCA4-213ENST00000587988 MIER3Q7Z3K6 550 aa12.07□□□□□ -0.48
SMARCA4-213ENST00000587988 LINC00301Q8NCQ3 95 aa12.07□□□□□ -0.48
SMARCA4-213ENST00000587988 DIS3LQ8TF46 1054 aaKnown RBP12.07□□□□□ -0.48
SMARCA4-213ENST00000587988 C16orf70Q9BSU1 422 aa12.07□□□□□ -0.48
SMARCA4-213ENST00000587988 CEP131Q9UPN4 1083 aa12.07□□□□□ -0.48
SMARCA4-213ENST00000587988 WDR81Q562E7 1941 aa12.06□□□□□ -0.48
SMARCA4-213ENST00000587988 IGKV6D-21A0A0A0MT36 114 aa12.06□□□□□ -0.48
SMARCA4-213ENST00000587988 DNM1LO00429 736 aa12.06□□□□□ -0.48
SMARCA4-213ENST00000587988 LAD1O00515 517 aa12.06□□□□□ -0.48
SMARCA4-213ENST00000587988 ZEB2O60315 1214 aa12.06□□□□□ -0.48
SMARCA4-213ENST00000587988 BMP15O95972 392 aa12.06□□□□□ -0.48
SMARCA4-213ENST00000587988 LGALS2P05162 132 aa12.06□□□□□ -0.48
SMARCA4-213ENST00000587988 SUPT20HL2P0C7V6 817 aa12.06□□□□□ -0.48
SMARCA4-213ENST00000587988 PRPHP41219 470 aa12.06□□□□□ -0.48
SMARCA4-213ENST00000587988 ACLYP53396 1101 aa12.06□□□□□ -0.48
SMARCA4-213ENST00000587988 SOX10P56693 466 aa12.06□□□□□ -0.48
SMARCA4-213ENST00000587988 PURAQ00577 322 aaKnown RBP12.06□□□□□ -0.48
SMARCA4-213ENST00000587988 SLC39A14Q15043 492 aa12.06□□□□□ -0.48
SMARCA4-213ENST00000587988 ARL6IP4Q66PJ3 421 aaKnown RBP12.06□□□□□ -0.48
SMARCA4-213ENST00000587988 NCAPH2Q6IBW4 605 aa12.06□□□□□ -0.48
SMARCA4-213ENST00000587988 DTHD1Q6ZMT9 781 aa12.06□□□□□ -0.48
SMARCA4-213ENST00000587988 TRIM50Q86XT4 487 aa12.06□□□□□ -0.48
SMARCA4-213ENST00000587988 CCDC60Q8IWA6 550 aaPredicted RBP12.06□□□□□ -0.48
SMARCA4-213ENST00000587988 SMAP1Q8IYB5 467 aaPredicted RBP12.06□□□□□ -0.48
SMARCA4-213ENST00000587988 PCSK9Q8NBP7 692 aaKnown RBP12.06□□□□□ -0.48
SMARCA4-213ENST00000587988 PPP1R13LQ8WUF5 828 aa12.06□□□□□ -0.48
SMARCA4-213ENST00000587988 KAT2BQ92831 832 aa12.06□□□□□ -0.48
SMARCA4-213ENST00000587988 FERMT2Q96AC1 680 aa12.06□□□□□ -0.48
SMARCA4-213ENST00000587988 TSEN34Q9BSV6 310 aaKnown RBP12.06□□□□□ -0.48
SMARCA4-213ENST00000587988 DISC1Q9NRI5 854 aa12.06□□□□□ -0.48
SMARCA4-213ENST00000587988 PHF24Q9UPV7 400 aa12.06□□□□□ -0.48
SMARCA4-213ENST00000587988 SAMM50Q9Y512 469 aa12.06□□□□□ -0.48
SMARCA4-213ENST00000587988 PCDHA10Q9Y5I2 948 aa12.06□□□□□ -0.48
SMARCA4-213ENST00000587988 VWA3AA6NCI4 1184 aa12.05□□□□□ -0.48
SMARCA4-213ENST00000587988 MOXD2PA6NHM9 499 aa12.05□□□□□ -0.48
SMARCA4-213ENST00000587988 WDR64B1ANS9 1081 aa12.05□□□□□ -0.48
SMARCA4-213ENST00000587988 KBTBD13C9JR72 458 aa12.05□□□□□ -0.48
SMARCA4-213ENST00000587988 LGR5O75473 907 aa12.05□□□□□ -0.48
SMARCA4-213ENST00000587988 CDC25AP30304 524 aa12.05□□□□□ -0.48
SMARCA4-213ENST00000587988 SFNP31947 248 aa12.05□□□□□ -0.48
SMARCA4-213ENST00000587988 FXR2P51116 673 aaKnown RBP eCLIP12.05□□□□□ -0.488e-8■■■□□ 16.5
SMARCA4-213ENST00000587988 JAK3P52333 1124 aa12.05□□□□□ -0.48
SMARCA4-213ENST00000587988 PSMC6P62333 389 aa12.05□□□□□ -0.48
SMARCA4-213ENST00000587988 STK38Q15208 465 aa12.05□□□□□ -0.48
SMARCA4-213ENST00000587988 EPHA7Q15375 998 aa12.05□□□□□ -0.48
SMARCA4-213ENST00000587988 UGCGQ16739 394 aa12.05□□□□□ -0.48
SMARCA4-213ENST00000587988 BRDTQ58F21 947 aaPredicted RBP12.05□□□□□ -0.48
SMARCA4-213ENST00000587988 ATL3Q6DD88 541 aa12.05□□□□□ -0.48
SMARCA4-213ENST00000587988 SWSAP1Q6NVH7 229 aa12.05□□□□□ -0.48
SMARCA4-213ENST00000587988 MIS18BP1Q6P0N0 1132 aa12.05□□□□□ -0.48
SMARCA4-213ENST00000587988 IGSF22Q8N9C0 903 aa12.05□□□□□ -0.48
SMARCA4-213ENST00000587988 ANKLE1Q8NAG6 615 aa12.05□□□□□ -0.48
SMARCA4-213ENST00000587988 CLIC6Q96NY7 704 aa12.05□□□□□ -0.48
SMARCA4-213ENST00000587988 GABBR1Q9UBS5 961 aa12.05□□□□□ -0.48
SMARCA4-213ENST00000587988 TCEAL9Q9UHQ7 104 aa12.05□□□□□ -0.48
SMARCA4-213ENST00000587988 FBXO2Q9UK22 296 aaPredicted RBP12.05□□□□□ -0.48
SMARCA4-213ENST00000587988 ATP6V1DQ9Y5K8 247 aa12.05□□□□□ -0.48
SMARCA4-213ENST00000587988 A0A1W2PQ45 241 aaPredicted RBP12.04□□□□□ -0.48
SMARCA4-213ENST00000587988 A0A1W2PQY0 241 aa12.04□□□□□ -0.48
SMARCA4-213ENST00000587988 PP2D1A8MPX8 630 aa12.04□□□□□ -0.48
SMARCA4-213ENST00000587988 BACH1O14867 736 aa12.04□□□□□ -0.48
SMARCA4-213ENST00000587988 SPTLC2O15270 562 aa12.04□□□□□ -0.48
SMARCA4-213ENST00000587988 KPNA6O60684 536 aa12.04□□□□□ -0.48
SMARCA4-213ENST00000587988 YEATS4O95619 227 aa12.04□□□□□ -0.48
SMARCA4-213ENST00000587988 PSAPP07602 524 aa12.04□□□□□ -0.48
SMARCA4-213ENST00000587988 COL6A1P12109 1028 aa12.04□□□□□ -0.48
SMARCA4-213ENST00000587988 NCLP19338 710 aaKnown RBP12.04□□□□□ -0.48
SMARCA4-213ENST00000587988 ATP4AP20648 1035 aa12.04□□□□□ -0.48
SMARCA4-213ENST00000587988 STAT5BP51692 787 aa12.04□□□□□ -0.48
SMARCA4-213ENST00000587988 KRT85P78386 507 aa12.04□□□□□ -0.48
SMARCA4-213ENST00000587988 TMEM266Q2M3C6 531 aa12.04□□□□□ -0.48
SMARCA4-213ENST00000587988 SPECC1Q5M775 1068 aa12.04□□□□□ -0.48
SMARCA4-213ENST00000587988 BANK1Q8NDB2 785 aa12.04□□□□□ -0.48
SMARCA4-213ENST00000587988 RDM1Q8NG50 284 aa12.04□□□□□ -0.48
SMARCA4-213ENST00000587988 TNPO1Q92973 898 aaKnown RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms