RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 RBM28Q9NW13 759 aaKnown RBP21.55■■□□□ 1.04
TRIM47-205ENST00000587774 PCDHA6Q9UN73 950 aa21.55■■□□□ 1.04
TRIM47-205ENST00000587774 PCDHA8Q9Y5H6 950 aa21.55■■□□□ 1.04
TRIM47-205ENST00000587774 MTCH2Q9Y6C9 303 aa21.55■■□□□ 1.04
TRIM47-205ENST00000587774 TTC3P53804 2025 aa21.55■■□□□ 1.04
TRIM47-205ENST00000587774 ZBTB43O43298 467 aa21.54■■□□□ 1.04
TRIM47-205ENST00000587774 CTSHP09668 335 aa21.54■■□□□ 1.04
TRIM47-205ENST00000587774 TCF7P36402 384 aaPredicted RBP21.54■■□□□ 1.04
TRIM47-205ENST00000587774 MKRN4PQ13434 485 aaPredicted RBP21.54■■□□□ 1.04
TRIM47-205ENST00000587774 MTMR1Q13613 665 aa21.54■■□□□ 1.04
TRIM47-205ENST00000587774 RTN1Q16799 776 aa21.54■■□□□ 1.04
TRIM47-205ENST00000587774 KRT40Q6A162 431 aa21.54■■□□□ 1.04
TRIM47-205ENST00000587774 TYW1BQ6NUM6 668 aa21.54■■□□□ 1.04
TRIM47-205ENST00000587774 DHX32Q7L7V1 743 aaKnown RBP21.54■■□□□ 1.04
TRIM47-205ENST00000587774 DBF4BQ8NFT6 615 aa21.54■■□□□ 1.04
TRIM47-205ENST00000587774 CDHR1Q96JP9 859 aa21.54■■□□□ 1.04
TRIM47-205ENST00000587774 PKD2L1Q9P0L9 805 aa21.54■■□□□ 1.04
TRIM47-205ENST00000587774 UBIAD1Q9Y5Z9 338 aa21.54■■□□□ 1.04
TRIM47-205ENST00000587774 GTPBP6O43824 516 aaPredicted RBP21.53■■□□□ 1.04
TRIM47-205ENST00000587774 POU3F3P20264 500 aaPredicted RBP21.53■■□□□ 1.04
TRIM47-205ENST00000587774 ADAM17P78536 824 aa21.53■■□□□ 1.04
TRIM47-205ENST00000587774 FUT2Q10981 343 aa21.53■■□□□ 1.04
TRIM47-205ENST00000587774 TSGA10IPQ3SY00 556 aa21.53■■□□□ 1.04
TRIM47-205ENST00000587774 PLEKHG4Q58EX7 1191 aa21.53■■□□□ 1.04
TRIM47-205ENST00000587774 FAM117BQ6P1L5 589 aa21.53■■□□□ 1.04
TRIM47-205ENST00000587774 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.53■■□□□ 1.04
TRIM47-205ENST00000587774 ASB2Q96Q27 587 aa21.53■■□□□ 1.04
TRIM47-205ENST00000587774 OSBPL7Q9BZF2 842 aa21.53■■□□□ 1.04
TRIM47-205ENST00000587774 CAND2O75155 1236 aa21.52■■□□□ 1.04
TRIM47-205ENST00000587774 GNAT1P11488 350 aa21.52■■□□□ 1.04
TRIM47-205ENST00000587774 NAPAP54920 295 aa21.52■■□□□ 1.04
TRIM47-205ENST00000587774 ARHGAP4P98171 946 aa21.52■■□□□ 1.04
TRIM47-205ENST00000587774 KLF18A0A0U1RQI7 1052 aa21.51■■□□□ 1.03
TRIM47-205ENST00000587774 GSTTP1A0A1W2PQM5 241 aa21.51■■□□□ 1.03
TRIM47-205ENST00000587774 GOLGA8AA7E2F4 631 aa21.51■■□□□ 1.03
TRIM47-205ENST00000587774 GOLGA8BA8MQT2 603 aa21.51■■□□□ 1.03
TRIM47-205ENST00000587774 LPXNO60711 386 aa21.51■■□□□ 1.03
TRIM47-205ENST00000587774 GRB10Q13322 594 aa21.51■■□□□ 1.03
TRIM47-205ENST00000587774 KRT32Q14532 448 aa21.51■■□□□ 1.03
TRIM47-205ENST00000587774 PPP1R18Q6NYC8 613 aa21.51■■□□□ 1.03
TRIM47-205ENST00000587774 PGBD1Q96JS3 809 aa21.51■■□□□ 1.03
TRIM47-205ENST00000587774 RAD9AQ99638 391 aa21.51■■□□□ 1.03
TRIM47-205ENST00000587774 EHMT1Q9H9B1 1298 aa21.51■■□□□ 1.03
TRIM47-205ENST00000587774 JADE2Q9NQC1 790 aa21.51■■□□□ 1.03
TRIM47-205ENST00000587774 NRCAMQ92823 1304 aa21.51■■□□□ 1.03
TRIM47-205ENST00000587774 LINC01553A4QN01 128 aa21.5■■□□□ 1.03
TRIM47-205ENST00000587774 STXBP3O00186 592 aa21.5■■□□□ 1.03
TRIM47-205ENST00000587774 MARK3P27448 753 aa21.5■■□□□ 1.03
TRIM47-205ENST00000587774 MRPS5P82675 430 aaKnown RBP21.5■■□□□ 1.03
TRIM47-205ENST00000587774 MYOCDQ8IZQ8 938 aa21.5■■□□□ 1.03
TRIM47-205ENST00000587774 GDPD5Q8WTR4 605 aa21.5■■□□□ 1.03
TRIM47-205ENST00000587774 TSPYL2Q9H2G4 693 aaPredicted RBP21.5■■□□□ 1.03
TRIM47-205ENST00000587774 RIC8AQ9NPQ8 531 aa21.5■■□□□ 1.03
TRIM47-205ENST00000587774 MTUS1Q9ULD2 1270 aa21.5■■□□□ 1.03
TRIM47-205ENST00000587774 FNDC1Q4ZHG4 1894 aaPredicted RBP21.49■■□□□ 1.03
TRIM47-205ENST00000587774 AMHP03971 560 aa21.49■■□□□ 1.03
TRIM47-205ENST00000587774 CPA1P15085 419 aa21.49■■□□□ 1.03
TRIM47-205ENST00000587774 CDC27P30260 824 aa21.49■■□□□ 1.03
TRIM47-205ENST00000587774 ADCY7P51828 1080 aa21.49■■□□□ 1.03
TRIM47-205ENST00000587774 TFF2Q03403 129 aa21.49■■□□□ 1.03
TRIM47-205ENST00000587774 SKIV2LQ15477 1246 aaKnown RBP21.49■■□□□ 1.03
TRIM47-205ENST00000587774 SEPT1Q8WYJ6 367 aa21.49■■□□□ 1.03
TRIM47-205ENST00000587774 SEPT8Q92599 483 aa21.49■■□□□ 1.03
TRIM47-205ENST00000587774 FAM217BQ9NTX9 383 aaPredicted RBP21.49■■□□□ 1.03
TRIM47-205ENST00000587774 ERAP1Q9NZ08 941 aa21.49■■□□□ 1.03
TRIM47-205ENST00000587774 V9GY48 417 aaPredicted RBP21.49■■□□□ 1.03
TRIM47-205ENST00000587774 MYO7AQ13402 2215 aa21.49■■□□□ 1.03
TRIM47-205ENST00000587774 hCG_1984214I3L0E3 225 aa21.48■■□□□ 1.03
TRIM47-205ENST00000587774 HMGB1P09429 215 aaKnown RBP21.48■■□□□ 1.03
TRIM47-205ENST00000587774 PPFIA1Q13136 1202 aa21.48■■□□□ 1.03
TRIM47-205ENST00000587774 RUFY4Q6ZNE9 571 aa21.48■■□□□ 1.03
TRIM47-205ENST00000587774 ZNF713Q8N859 430 aaPredicted RBP21.48■■□□□ 1.03
TRIM47-205ENST00000587774 CYP2W1Q8TAV3 490 aa21.48■■□□□ 1.03
TRIM47-205ENST00000587774 MXRA8Q9BRK3 442 aa21.48■■□□□ 1.03
TRIM47-205ENST00000587774 ANO3Q9BYT9 981 aa21.48■■□□□ 1.03
TRIM47-205ENST00000587774 JPH1Q9HDC5 661 aaPredicted RBP21.48■■□□□ 1.03
TRIM47-205ENST00000587774 KCNH7Q9NS40 1196 aa21.48■■□□□ 1.03
TRIM47-205ENST00000587774 BARHL2Q9NY43 387 aa21.48■■□□□ 1.03
TRIM47-205ENST00000587774 NAP1L2Q9ULW6 460 aaPredicted RBP21.48■■□□□ 1.03
TRIM47-205ENST00000587774 C5orf42Q9H799 3197 aa21.48■■□□□ 1.03
TRIM47-205ENST00000587774 PLXNA4Q9HCM2 1894 aa21.47■■□□□ 1.03
TRIM47-205ENST00000587774 MAFGO15525 162 aa21.47■■□□□ 1.03
TRIM47-205ENST00000587774 RCAN1P53805 252 aa21.47■■□□□ 1.03
TRIM47-205ENST00000587774 ERVK-21P61565 698 aa21.47■■□□□ 1.03
TRIM47-205ENST00000587774 GRIK4Q16099 956 aa21.47■■□□□ 1.03
TRIM47-205ENST00000587774 FAM26DQ5JW98 314 aa21.47■■□□□ 1.03
TRIM47-205ENST00000587774 ADAMTS19Q8TE59 1207 aa21.47■■□□□ 1.03
TRIM47-205ENST00000587774 GLG1Q92896 1179 aa21.47■■□□□ 1.03
TRIM47-205ENST00000587774 TGS1Q96RS0 853 aaKnown RBP21.47■■□□□ 1.03
TRIM47-205ENST00000587774 TMEM260Q9NX78 707 aa21.47■■□□□ 1.03
TRIM47-205ENST00000587774 TUBE1Q9UJT0 475 aa21.47■■□□□ 1.03
TRIM47-205ENST00000587774 INSL6Q9Y581 213 aa21.47■■□□□ 1.03
TRIM47-205ENST00000587774 NID2Q14112 1375 aa21.47■■□□□ 1.03
TRIM47-205ENST00000587774 CLK2P49760 499 aaKnown RBP21.46■■□□□ 1.03
TRIM47-205ENST00000587774 HTRA4P83105 476 aaPredicted RBP21.46■■□□□ 1.03
TRIM47-205ENST00000587774 FGD1P98174 961 aa21.46■■□□□ 1.03
TRIM47-205ENST00000587774 APOBRQ0VD83 1088 aa21.46■■□□□ 1.03
TRIM47-205ENST00000587774 TEX2Q8IWB9 1127 aa21.46■■□□□ 1.03
TRIM47-205ENST00000587774 KCNB2Q92953 911 aa21.46■■□□□ 1.03
TRIM47-205ENST00000587774 JAKMIP1Q96N16 626 aaKnown RBP21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms