RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 FILIP1Q7Z7B0 1213 aa22.11■■□□□ 1.13
TRIM47-204ENST00000587339 NCAPG2Q86XI2 1143 aa22.11■■□□□ 1.13
TRIM47-204ENST00000587339 CCDC65Q8IXS2 484 aa22.11■■□□□ 1.13
TRIM47-204ENST00000587339 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.11■■□□□ 1.13
TRIM47-204ENST00000587339 TRIM49BA6NDI0 452 aa22.1■■□□□ 1.13
TRIM47-204ENST00000587339 MAFGO15525 162 aa22.1■■□□□ 1.13
TRIM47-204ENST00000587339 EYA4O95677 639 aa22.1■■□□□ 1.13
TRIM47-204ENST00000587339 COASYQ13057 564 aa22.1■■□□□ 1.13
TRIM47-204ENST00000587339 CCDC144BQ3MJ40 725 aa22.1■■□□□ 1.13
TRIM47-204ENST00000587339 ARSHQ5FYA8 562 aa22.1■■□□□ 1.13
TRIM47-204ENST00000587339 GPAT2Q6NUI2 795 aa22.1■■□□□ 1.13
TRIM47-204ENST00000587339 MIER3Q7Z3K6 550 aa22.1■■□□□ 1.13
TRIM47-204ENST00000587339 NLRX1Q86UT6 975 aa22.1■■□□□ 1.13
TRIM47-204ENST00000587339 FAM43AQ8N2R8 423 aa22.1■■□□□ 1.13
TRIM47-204ENST00000587339 NEK9Q8TD19 979 aa22.1■■□□□ 1.13
TRIM47-204ENST00000587339 GPRASP2Q96D09 838 aa22.1■■□□□ 1.13
TRIM47-204ENST00000587339 INPP4AQ96PE3 977 aaPredicted RBP22.1■■□□□ 1.13
TRIM47-204ENST00000587339 GBA2Q9HCG7 927 aaPredicted RBP22.1■■□□□ 1.13
TRIM47-204ENST00000587339 PMS1P54277 932 aaKnown RBP22.1■■□□□ 1.13
TRIM47-204ENST00000587339 RAD51AP2Q09MP3 1159 aa22.1■■□□□ 1.13
TRIM47-204ENST00000587339 DNERQ8NFT8 737 aa22.1■■□□□ 1.13
TRIM47-204ENST00000587339 PIGOQ8TEQ8 1089 aa22.1■■□□□ 1.13
TRIM47-204ENST00000587339 MOV10L1Q9BXT6 1211 aaKnown RBP22.1■■□□□ 1.13
TRIM47-204ENST00000587339 NPHP3-ACAD11A0A0J9YXS1 232 aa22.09■■□□□ 1.13
TRIM47-204ENST00000587339 BICDL2A1A5D9 508 aa22.09■■□□□ 1.13
TRIM47-204ENST00000587339 STAM2O75886 525 aa22.09■■□□□ 1.13
TRIM47-204ENST00000587339 P2RX5Q93086 422 aa22.09■■□□□ 1.13
TRIM47-204ENST00000587339 TRIM47Q96LD4 638 aa22.09■■□□□ 1.13
TRIM47-204ENST00000587339 NACC1Q96RE7 527 aa22.09■■□□□ 1.13
TRIM47-204ENST00000587339 LXNQ9BS40 222 aa22.09■■□□□ 1.13
TRIM47-204ENST00000587339 IMPACTQ9P2X3 320 aa22.09■■□□□ 1.13
TRIM47-204ENST00000587339 SAMM50Q9Y512 469 aa22.09■■□□□ 1.13
TRIM47-204ENST00000587339 ATP9AO75110 1047 aa22.08■■□□□ 1.13
TRIM47-204ENST00000587339 CNMDO75829 334 aa22.08■■□□□ 1.13
TRIM47-204ENST00000587339 CCNE1P24864 410 aa22.08■■□□□ 1.13
TRIM47-204ENST00000587339 CACNB1Q02641 598 aaPredicted RBP22.08■■□□□ 1.13
TRIM47-204ENST00000587339 TMC6Q7Z403 805 aa22.08■■□□□ 1.13
TRIM47-204ENST00000587339 C2orf69Q8N8R5 385 aa22.08■■□□□ 1.13
TRIM47-204ENST00000587339 CTAGE1Q96RT6 745 aa22.08■■□□□ 1.13
TRIM47-204ENST00000587339 IWS1Q96ST2 819 aa22.08■■□□□ 1.13
TRIM47-204ENST00000587339 RBPJLQ9UBG7 517 aa22.08■■□□□ 1.13
TRIM47-204ENST00000587339 TCEAL9Q9UHQ7 104 aa22.08■■□□□ 1.13
TRIM47-204ENST00000587339 SLC25A27O95847 323 aa22.08■■□□□ 1.12
TRIM47-204ENST00000587339 SPAG1Q07617 926 aa22.08■■□□□ 1.12
TRIM47-204ENST00000587339 FAM26FQ5R3K3 315 aa22.08■■□□□ 1.12
TRIM47-204ENST00000587339 TTI2Q6NXR4 508 aa22.08■■□□□ 1.12
TRIM47-204ENST00000587339 GUF1Q8N442 669 aaKnown RBP22.08■■□□□ 1.12
TRIM47-204ENST00000587339 BANK1Q8NDB2 785 aa22.08■■□□□ 1.12
TRIM47-204ENST00000587339 TXNRD2Q9NNW7 524 aa22.08■■□□□ 1.12
TRIM47-204ENST00000587339 WRAP73Q9P2S5 460 aaPredicted RBP22.08■■□□□ 1.12
TRIM47-204ENST00000587339 CELF2O95319 508 aaKnown RBP22.07■■□□□ 1.12
TRIM47-204ENST00000587339 P4HBP07237 508 aaKnown RBP22.07■■□□□ 1.12
TRIM47-204ENST00000587339 ERCC3P19447 782 aa22.07■■□□□ 1.12
TRIM47-204ENST00000587339 CNTN2Q02246 1040 aa22.07■■□□□ 1.12
TRIM47-204ENST00000587339 GIT2Q14161 759 aa22.07■■□□□ 1.12
TRIM47-204ENST00000587339 HERC4Q5GLZ8 1057 aaPredicted RBP22.07■■□□□ 1.12
TRIM47-204ENST00000587339 CDHR1Q96JP9 859 aa22.07■■□□□ 1.12
TRIM47-204ENST00000587339 KCNF1Q9H3M0 494 aa22.07■■□□□ 1.12
TRIM47-204ENST00000587339 PNMA3Q9UL41 463 aa22.07■■□□□ 1.12
TRIM47-204ENST00000587339 FRMD3A2A2Y4 597 aa22.06■■□□□ 1.12
TRIM47-204ENST00000587339 RGS20O76081 388 aa22.06■■□□□ 1.12
TRIM47-204ENST00000587339 CETPP11597 493 aa22.06■■□□□ 1.12
TRIM47-204ENST00000587339 KRT76Q01546 638 aa22.06■■□□□ 1.12
TRIM47-204ENST00000587339 GNPTABQ3T906 1256 aa22.06■■□□□ 1.12
TRIM47-204ENST00000587339 ANKRD20A12PQ8NF67 263 aa22.06■■□□□ 1.12
TRIM47-204ENST00000587339 REEP2Q9BRK0 252 aa22.06■■□□□ 1.12
TRIM47-204ENST00000587339 ZHX3Q9H4I2 956 aa22.06■■□□□ 1.12
TRIM47-204ENST00000587339 RRAGDQ9NQL2 400 aaPredicted RBP22.06■■□□□ 1.12
TRIM47-204ENST00000587339 INTS13Q9NVM9 706 aa22.06■■□□□ 1.12
TRIM47-204ENST00000587339 A0A1B0GTH6 734 aa22.06■■□□□ 1.12
TRIM47-204ENST00000587339 POTEB2H3BUK9 544 aa22.06■■□□□ 1.12
TRIM47-204ENST00000587339 ZBTB39O15060 712 aa22.06■■□□□ 1.12
TRIM47-204ENST00000587339 COPB2P35606 906 aa22.06■■□□□ 1.12
TRIM47-204ENST00000587339 GTF2A2P52657 109 aa22.06■■□□□ 1.12
TRIM47-204ENST00000587339 GSDMDP57764 484 aa22.06■■□□□ 1.12
TRIM47-204ENST00000587339 STXBP2Q15833 593 aa22.06■■□□□ 1.12
TRIM47-204ENST00000587339 ANKRD40Q6AI12 368 aa22.06■■□□□ 1.12
TRIM47-204ENST00000587339 CENPPQ6IPU0 288 aa22.06■■□□□ 1.12
TRIM47-204ENST00000587339 APTXQ7Z2E3 356 aaKnown RBP22.06■■□□□ 1.12
TRIM47-204ENST00000587339 CSGALNACT2Q8N6G5 542 aa22.06■■□□□ 1.12
TRIM47-204ENST00000587339 ZSWIM4Q9H7M6 989 aa22.06■■□□□ 1.12
TRIM47-204ENST00000587339 NMRK2Q9NPI5 230 aa22.06■■□□□ 1.12
TRIM47-204ENST00000587339 KCNJ18B7U540 433 aa22.05■■□□□ 1.12
TRIM47-204ENST00000587339 SFNP31947 248 aa22.05■■□□□ 1.12
TRIM47-204ENST00000587339 JAK3P52333 1124 aa22.05■■□□□ 1.12
TRIM47-204ENST00000587339 KCNJ12Q14500 433 aa22.05■■□□□ 1.12
TRIM47-204ENST00000587339 FILIP1LQ4L180 1135 aa22.05■■□□□ 1.12
TRIM47-204ENST00000587339 TCP11X2Q5H9J9 407 aa22.05■■□□□ 1.12
TRIM47-204ENST00000587339 RINT1Q6NUQ1 792 aa22.05■■□□□ 1.12
TRIM47-204ENST00000587339 VSTM4Q8IW00 320 aa22.05■■□□□ 1.12
TRIM47-204ENST00000587339 NOC3LQ8WTT2 800 aaKnown RBP22.05■■□□□ 1.12
TRIM47-204ENST00000587339 RUSC1Q9BVN2 902 aa22.05■■□□□ 1.12
TRIM47-204ENST00000587339 SRRTQ9BXP5 876 aaKnown RBP22.05■■□□□ 1.12
TRIM47-204ENST00000587339 THAP9Q9H5L6 903 aa22.05■■□□□ 1.12
TRIM47-204ENST00000587339 ADD3Q9UEY8 706 aaKnown RBP22.05■■□□□ 1.12
TRIM47-204ENST00000587339 WDR64B1ANS9 1081 aa22.04■■□□□ 1.12
TRIM47-204ENST00000587339 ALDH5A1P51649 535 aaPredicted RBP22.04■■□□□ 1.12
TRIM47-204ENST00000587339 MKRN3Q13064 507 aaKnown RBP22.04■■□□□ 1.12
TRIM47-204ENST00000587339 NR1I3Q14994 352 aa22.04■■□□□ 1.12
TRIM47-204ENST00000587339 LRRC41Q15345 812 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms