RNA–Protein interactions for RNA: ENST00000586993.5

DDX39A-205, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-205ENST00000586993 Q7L0L9 218 aa25.35■■□□□ 1.65
DDX39A-205ENST00000586993 FAM177A1Q8N128 213 aaPredicted RBP25.35■■□□□ 1.65
DDX39A-205ENST00000586993 WNT8BQ93098 351 aa25.35■■□□□ 1.65
DDX39A-205ENST00000586993 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.35■■□□□ 1.653e-12■□□□□ 11.1
DDX39A-205ENST00000586993 NOD1Q9Y239 953 aa25.35■■□□□ 1.65
DDX39A-205ENST00000586993 RBAK-RBAKDNI3L0D1 243 aa25.34■■□□□ 1.65
DDX39A-205ENST00000586993 SMIM10L2AP0DMW4 78 aa25.34■■□□□ 1.65
DDX39A-205ENST00000586993 SMIM10L2BP0DMW5 78 aa25.34■■□□□ 1.65
DDX39A-205ENST00000586993 HOXC8P31273 242 aa25.34■■□□□ 1.65
DDX39A-205ENST00000586993 CIITAP33076 1130 aa25.34■■□□□ 1.65
DDX39A-205ENST00000586993 SEPT1Q8WYJ6 367 aa25.34■■□□□ 1.65
DDX39A-205ENST00000586993 LENG9Q96B70 501 aa25.34■■□□□ 1.65
DDX39A-205ENST00000586993 PCYT2Q99447 389 aa25.34■■□□□ 1.65
DDX39A-205ENST00000586993 SLC9A2Q9UBY0 812 aa25.34■■□□□ 1.65
DDX39A-205ENST00000586993 LIMCH1Q9UPQ0 1083 aa25.34■■□□□ 1.65
DDX39A-205ENST00000586993 TET1Q8NFU7 2136 aa25.33■■□□□ 1.65
DDX39A-205ENST00000586993 DHX15O43143 795 aaKnown RBP25.33■■□□□ 1.65
DDX39A-205ENST00000586993 CCNE2O96020 404 aa25.33■■□□□ 1.65
DDX39A-205ENST00000586993 TMEM240Q5SV17 173 aa25.33■■□□□ 1.65
DDX39A-205ENST00000586993 SDF4Q9BRK5 362 aa25.33■■□□□ 1.65
DDX39A-205ENST00000586993 IL23AQ9NPF7 189 aa25.33■■□□□ 1.65
DDX39A-205ENST00000586993 PITPNM1O00562 1244 aa25.32■■□□□ 1.64
DDX39A-205ENST00000586993 ACTR2P61160 394 aa25.32■■□□□ 1.64
DDX39A-205ENST00000586993 PRR16Q569H4 304 aa25.32■■□□□ 1.64
DDX39A-205ENST00000586993 GALNT17Q6IS24 598 aa25.32■■□□□ 1.64
DDX39A-205ENST00000586993 OXER1Q8TDS5 423 aa25.32■■□□□ 1.64
DDX39A-205ENST00000586993 TBCKQ8TEA7 893 aa25.32■■□□□ 1.64
DDX39A-205ENST00000586993 RNPEPQ9H4A4 650 aa25.32■■□□□ 1.64
DDX39A-205ENST00000586993 COL6A3P12111 3177 aa25.32■■□□□ 1.64
DDX39A-205ENST00000586993 KAT6AQ92794 2004 aa25.32■■□□□ 1.64
DDX39A-205ENST00000586993 DDX39AO00148 427 aaKnown RBP25.31■■□□□ 1.64
DDX39A-205ENST00000586993 TRIM71Q2Q1W2 868 aaKnown RBP25.31■■□□□ 1.64
DDX39A-205ENST00000586993 ZNF365Q70YC5 407 aa25.31■■□□□ 1.64
DDX39A-205ENST00000586993 SLC17A8Q8NDX2 589 aa25.31■■□□□ 1.64
DDX39A-205ENST00000586993 RNPC3Q96LT9 517 aaKnown RBP25.31■■□□□ 1.64
DDX39A-205ENST00000586993 ZNF215Q9UL58 517 aaPredicted RBP25.31■■□□□ 1.64
DDX39A-205ENST00000586993 IPO5O00410 1097 aaKnown RBP25.3■■□□□ 1.64
DDX39A-205ENST00000586993 LGR5O75473 907 aa25.3■■□□□ 1.64
DDX39A-205ENST00000586993 SETQ01105 290 aaPredicted RBP25.3■■□□□ 1.64
DDX39A-205ENST00000586993 RBL2Q08999 1139 aa25.3■■□□□ 1.64
DDX39A-205ENST00000586993 CCDC83Q8IWF9 413 aa25.3■■□□□ 1.64
DDX39A-205ENST00000586993 SETD4Q9NVD3 440 aa25.3■■□□□ 1.64
DDX39A-205ENST00000586993 MTMR10Q9NXD2 777 aa25.3■■□□□ 1.64
DDX39A-205ENST00000586993 EMSYQ7Z589 1322 aa25.3■■□□□ 1.64
DDX39A-205ENST00000586993 C17orf102A2RUQ5 167 aa25.29■■□□□ 1.64
DDX39A-205ENST00000586993 IQCF3P0C7M6 154 aa25.29■■□□□ 1.64
DDX39A-205ENST00000586993 MARK3P27448 753 aa25.29■■□□□ 1.64
DDX39A-205ENST00000586993 USP11P51784 963 aa25.29■■□□□ 1.64
DDX39A-205ENST00000586993 PTK7Q13308 1070 aa25.29■■□□□ 1.64
DDX39A-205ENST00000586993 BFSP2Q13515 415 aa25.29■■□□□ 1.64
DDX39A-205ENST00000586993 SERINC5Q86VE9 423 aa25.29■■□□□ 1.64
DDX39A-205ENST00000586993 WASF1Q92558 559 aa25.29■■□□□ 1.64
DDX39A-205ENST00000586993 ZNF577Q9BSK1 485 aa25.29■■□□□ 1.64
DDX39A-205ENST00000586993 GTF3C3Q9Y5Q9 886 aa25.29■■□□□ 1.64
DDX39A-205ENST00000586993 TREHO43280 583 aa25.28■■□□□ 1.64
DDX39A-205ENST00000586993 TDP2O95551 362 aa25.28■■□□□ 1.64
DDX39A-205ENST00000586993 RABEP1Q15276 862 aa25.28■■□□□ 1.64
DDX39A-205ENST00000586993 INF2Q27J81 1249 aa25.28■■□□□ 1.64
DDX39A-205ENST00000586993 RASIP1Q5U651 963 aa25.28■■□□□ 1.64
DDX39A-205ENST00000586993 PSRC1Q6PGN9 363 aaPredicted RBP25.28■■□□□ 1.64
DDX39A-205ENST00000586993 TRAF7Q6Q0C0 670 aa25.28■■□□□ 1.64
DDX39A-205ENST00000586993 CAGE1Q8TC20 777 aa25.28■■□□□ 1.64
DDX39A-205ENST00000586993 LMBR1Q8WVP7 490 aa25.28■■□□□ 1.64
DDX39A-205ENST00000586993 GLG1Q92896 1179 aa25.28■■□□□ 1.64
DDX39A-205ENST00000586993 ATP6V0A1Q93050 837 aa25.28■■□□□ 1.64
DDX39A-205ENST00000586993 TBC1D32Q96NH3 1257 aa25.28■■□□□ 1.64
DDX39A-205ENST00000586993 WDR81Q562E7 1941 aa25.27■■□□□ 1.64
DDX39A-205ENST00000586993 ATG7O95352 703 aa25.27■■□□□ 1.64
DDX39A-205ENST00000586993 CKBP12277 381 aa25.27■■□□□ 1.64
DDX39A-205ENST00000586993 XBP1P17861 261 aa25.27■■□□□ 1.64
DDX39A-205ENST00000586993 FOSBP53539 338 aa25.27■■□□□ 1.64
DDX39A-205ENST00000586993 ADAM17P78536 824 aa25.27■■□□□ 1.64
DDX39A-205ENST00000586993 GPNMBQ14956 572 aa25.27■■□□□ 1.64
DDX39A-205ENST00000586993 NONOQ15233 471 aaKnown RBP eCLIP25.27■■□□□ 1.642e-7■■■□□ 16.3
DDX39A-205ENST00000586993 EARS2Q5JPH6 523 aaKnown RBP25.27■■□□□ 1.64
DDX39A-205ENST00000586993 KRT25Q7Z3Z0 450 aa25.27■■□□□ 1.64
DDX39A-205ENST00000586993 DEFB128Q7Z7B8 93 aa25.27■■□□□ 1.64
DDX39A-205ENST00000586993 CCDC155Q8N6L0 562 aa25.27■■□□□ 1.64
DDX39A-205ENST00000586993 RETREG2Q8NC44 543 aa25.27■■□□□ 1.64
DDX39A-205ENST00000586993 AFAP1L1Q8TED9 768 aa25.27■■□□□ 1.64
DDX39A-205ENST00000586993 SMARCAD1Q9H4L7 1026 aa25.27■■□□□ 1.64
DDX39A-205ENST00000586993 ERAP1Q9NZ08 941 aa25.27■■□□□ 1.64
DDX39A-205ENST00000586993 FAM205CA6NFA0 338 aa25.26■■□□□ 1.63
DDX39A-205ENST00000586993 MSH4O15457 936 aa25.26■■□□□ 1.63
DDX39A-205ENST00000586993 SELPP16109 830 aa25.26■■□□□ 1.63
DDX39A-205ENST00000586993 FAM109BQ6ICB4 259 aaPredicted RBP25.26■■□□□ 1.63
DDX39A-205ENST00000586993 ABHD15Q6UXT9 468 aa25.26■■□□□ 1.63
DDX39A-205ENST00000586993 TNFRSF25Q93038 417 aa25.26■■□□□ 1.63
DDX39A-205ENST00000586993 GJA10Q969M2 543 aa25.26■■□□□ 1.63
DDX39A-205ENST00000586993 UPF2Q9HAU5 1272 aaKnown RBP25.26■■□□□ 1.63
DDX39A-205ENST00000586993 CXXC1Q9P0U4 656 aaPredicted RBP25.26■■□□□ 1.63
DDX39A-205ENST00000586993 STXBP5LQ9Y2K9 1186 aa25.26■■□□□ 1.63
DDX39A-205ENST00000586993 CYP3A7-CYP3A51PA0A087WV96 503 aa25.25■■□□□ 1.63
DDX39A-205ENST00000586993 IGKV6D-21A0A0A0MT36 114 aa25.25■■□□□ 1.63
DDX39A-205ENST00000586993 CD2BP2O95400 341 aaKnown RBP25.25■■□□□ 1.63
DDX39A-205ENST00000586993 CYP3A7P24462 503 aa25.25■■□□□ 1.63
DDX39A-205ENST00000586993 NR5A1Q13285 461 aa25.25■■□□□ 1.63
DDX39A-205ENST00000586993 LRRC8DQ7L1W4 858 aa25.25■■□□□ 1.63
DDX39A-205ENST00000586993 OTOP2Q7RTS6 562 aa25.25■■□□□ 1.63
DDX39A-205ENST00000586993 CCDC60Q8IWA6 550 aaPredicted RBP25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms