RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 CAMK1Q14012 370 aa13.74□□□□□ -0.21
BRCA1-225ENST00000586385 COL9A3Q14050 684 aaPredicted RBP13.74□□□□□ -0.21
BRCA1-225ENST00000586385 NEDD9Q14511 834 aa13.74□□□□□ -0.21
BRCA1-225ENST00000586385 LPIN1Q14693 890 aa13.74□□□□□ -0.21
BRCA1-225ENST00000586385 PUS10Q3MIT2 529 aaKnown RBP13.74□□□□□ -0.21
BRCA1-225ENST00000586385 UTP14CQ5TAP6 766 aaKnown RBP13.74□□□□□ -0.21
BRCA1-225ENST00000586385 USP17L6PQ6QN14 398 aa13.74□□□□□ -0.21
BRCA1-225ENST00000586385 RPAINQ86UA6 219 aa13.74□□□□□ -0.21
BRCA1-225ENST00000586385 LINC01599Q8WXQ3 324 aa13.74□□□□□ -0.21
BRCA1-225ENST00000586385 PIBF1Q8WXW3 757 aa13.74□□□□□ -0.21
BRCA1-225ENST00000586385 DCXO43602 365 aa13.73□□□□□ -0.21
BRCA1-225ENST00000586385 STAM2O75886 525 aa13.73□□□□□ -0.21
BRCA1-225ENST00000586385 GHRP10912 638 aa13.73□□□□□ -0.21
BRCA1-225ENST00000586385 GTF2F1P35269 517 aaKnown RBP eCLIP13.73□□□□□ -0.214e-8■■■□□ 16.5
BRCA1-225ENST00000586385 BMPR1AP36894 532 aa13.73□□□□□ -0.21
BRCA1-225ENST00000586385 SP4Q02446 784 aa13.73□□□□□ -0.21
BRCA1-225ENST00000586385 AAMPQ13685 434 aa13.73□□□□□ -0.21
BRCA1-225ENST00000586385 GNPTABQ3T906 1256 aa13.73□□□□□ -0.21
BRCA1-225ENST00000586385 MARCH8Q5T0T0 291 aa13.73□□□□□ -0.21
BRCA1-225ENST00000586385 PCNX4Q63HM2 1172 aa13.73□□□□□ -0.21
BRCA1-225ENST00000586385 EXOC6Q8TAG9 804 aa13.73□□□□□ -0.21
BRCA1-225ENST00000586385 IGDCC4Q8TDY8 1250 aa13.73□□□□□ -0.21
BRCA1-225ENST00000586385 APBB2Q92870 758 aa13.73□□□□□ -0.21
BRCA1-225ENST00000586385 ZBTB10Q96DT7 871 aa13.73□□□□□ -0.21
BRCA1-225ENST00000586385 IL17RAQ96F46 866 aa13.73□□□□□ -0.21
BRCA1-225ENST00000586385 SENP7Q9BQF6 1050 aa13.73□□□□□ -0.21
BRCA1-225ENST00000586385 CLDND1Q9NY35 253 aa13.73□□□□□ -0.21
BRCA1-225ENST00000586385 GSTTP1A0A1W2PQM5 241 aa13.72□□□□□ -0.21
BRCA1-225ENST00000586385 MBLAC1A4D2B0 266 aaPredicted RBP13.72□□□□□ -0.21
BRCA1-225ENST00000586385 E7EWF7 191 aa13.72□□□□□ -0.21
BRCA1-225ENST00000586385 PIK3CDO00329 1044 aa13.72□□□□□ -0.21
BRCA1-225ENST00000586385 ENPP3O14638 875 aa13.72□□□□□ -0.21
BRCA1-225ENST00000586385 GNAT1P11488 350 aa13.72□□□□□ -0.21
BRCA1-225ENST00000586385 ALADP13716 330 aa13.72□□□□□ -0.21
BRCA1-225ENST00000586385 KCNA2P16389 499 aa13.72□□□□□ -0.21
BRCA1-225ENST00000586385 ITGB5P18084 799 aa13.72□□□□□ -0.21
BRCA1-225ENST00000586385 CTNNB1P35222 781 aa13.72□□□□□ -0.21
BRCA1-225ENST00000586385 ALYREFQ86V81 257 aaKnown RBP13.72□□□□□ -0.21
BRCA1-225ENST00000586385 MB21D2Q8IYB1 491 aaPredicted RBP13.72□□□□□ -0.21
BRCA1-225ENST00000586385 CRIPAKQ8N1N5 446 aa13.72□□□□□ -0.21
BRCA1-225ENST00000586385 CLP1Q92989 425 aaKnown RBP13.72□□□□□ -0.21
BRCA1-225ENST00000586385 ZNF689Q96CS4 500 aaPredicted RBP13.72□□□□□ -0.21
BRCA1-225ENST00000586385 MYL10Q9BUA6 226 aa13.72□□□□□ -0.21
BRCA1-225ENST00000586385 ZNF215Q9UL58 517 aaPredicted RBP13.72□□□□□ -0.21
BRCA1-225ENST00000586385 ATG2AQ2TAZ0 1938 aa13.72□□□□□ -0.21
BRCA1-225ENST00000586385 ADGRA3Q8IWK6 1321 aa13.71□□□□□ -0.21
BRCA1-225ENST00000586385 NRCAMQ92823 1304 aa13.71□□□□□ -0.21
BRCA1-225ENST00000586385 LINC01565O15544 149 aa13.71□□□□□ -0.21
BRCA1-225ENST00000586385 TBX10O75333 385 aa13.71□□□□□ -0.21
BRCA1-225ENST00000586385 RB1P06400 928 aa13.71□□□□□ -0.21
BRCA1-225ENST00000586385 CHMLP26374 656 aa13.71□□□□□ -0.21
BRCA1-225ENST00000586385 IRS1P35568 1242 aa13.71□□□□□ -0.21
BRCA1-225ENST00000586385 TCF7P36402 384 aaPredicted RBP13.71□□□□□ -0.21
BRCA1-225ENST00000586385 TRAF1Q13077 416 aa13.71□□□□□ -0.21
BRCA1-225ENST00000586385 WTAPQ15007 396 aa13.71□□□□□ -0.21
BRCA1-225ENST00000586385 CLUL1Q15846 466 aa13.71□□□□□ -0.21
BRCA1-225ENST00000586385 FBXO47Q5MNV8 452 aa13.71□□□□□ -0.21
BRCA1-225ENST00000586385 TTC22Q5TAA0 569 aa13.71□□□□□ -0.21
BRCA1-225ENST00000586385 EP400NLQ6ZTU2 488 aa13.71□□□□□ -0.21
BRCA1-225ENST00000586385 RTN4RL1Q86UN2 441 aaPredicted RBP13.71□□□□□ -0.21
BRCA1-225ENST00000586385 ADHFE1Q8IWW8 467 aa13.71□□□□□ -0.21
BRCA1-225ENST00000586385 FIBCD1Q8N539 461 aa13.71□□□□□ -0.21
BRCA1-225ENST00000586385 SPZ1Q9BXG8 430 aa13.71□□□□□ -0.21
BRCA1-225ENST00000586385 AGO3Q9H9G7 860 aaKnown RBP13.71□□□□□ -0.21
BRCA1-225ENST00000586385 PRKAG3Q9UGI9 489 aa13.71□□□□□ -0.21
BRCA1-225ENST00000586385 DOCK5Q9H7D0 1870 aa13.71□□□□□ -0.21
BRCA1-225ENST00000586385 PLEKHA8P1O95397 391 aa13.7□□□□□ -0.22
BRCA1-225ENST00000586385 DNAJB1P25685 340 aa13.7□□□□□ -0.22
BRCA1-225ENST00000586385 TRDNQ13061 729 aa13.7□□□□□ -0.22
BRCA1-225ENST00000586385 PPFIA1Q13136 1202 aa13.7□□□□□ -0.22
BRCA1-225ENST00000586385 SMAD2Q15796 467 aaKnown RBP13.7□□□□□ -0.22
BRCA1-225ENST00000586385 GRIK4Q16099 956 aa13.7□□□□□ -0.22
BRCA1-225ENST00000586385 XRRA1Q6P2D8 792 aa13.7□□□□□ -0.22
BRCA1-225ENST00000586385 UIMC1Q96RL1 719 aa13.7□□□□□ -0.22
BRCA1-225ENST00000586385 PCYT2Q99447 389 aa13.7□□□□□ -0.22
BRCA1-225ENST00000586385 LY9Q9HBG7 655 aa13.7□□□□□ -0.22
BRCA1-225ENST00000586385 U3KPZ7 1027 aaPredicted RBP13.7□□□□□ -0.22
BRCA1-225ENST00000586385 MBTPS2O43462 519 aa13.69□□□□□ -0.22
BRCA1-225ENST00000586385 DGKIO75912 1065 aa13.69□□□□□ -0.22
BRCA1-225ENST00000586385 MARK3P27448 753 aa13.69□□□□□ -0.22
BRCA1-225ENST00000586385 TAF2Q6P1X5 1199 aa13.69□□□□□ -0.22
BRCA1-225ENST00000586385 HFE2Q6ZVN8 426 aa13.69□□□□□ -0.22
BRCA1-225ENST00000586385 CATIPQ7Z7H3 387 aa13.69□□□□□ -0.22
BRCA1-225ENST00000586385 CMTR1Q8N1G2 835 aaKnown RBP13.69□□□□□ -0.22
BRCA1-225ENST00000586385 SRBD1Q8N5C6 995 aaKnown RBP13.69□□□□□ -0.22
BRCA1-225ENST00000586385 NCOA7Q8NI08 942 aa13.69□□□□□ -0.22
BRCA1-225ENST00000586385 SMARCC2Q8TAQ2 1214 aa13.69□□□□□ -0.22
BRCA1-225ENST00000586385 DNAJB3Q8WWF6 145 aa13.69□□□□□ -0.22
BRCA1-225ENST00000586385 GPRASP2Q96D09 838 aa13.69□□□□□ -0.22
BRCA1-225ENST00000586385 FBXL18Q96ME1 805 aa13.69□□□□□ -0.22
BRCA1-225ENST00000586385 C11orf84Q9BUA3 381 aaPredicted RBP13.69□□□□□ -0.22
BRCA1-225ENST00000586385 LMAN2LQ9H0V9 348 aa13.69□□□□□ -0.22
BRCA1-225ENST00000586385 PLAGL2Q9UPG8 496 aa13.69□□□□□ -0.22
BRCA1-225ENST00000586385 UBIAD1Q9Y5Z9 338 aa13.69□□□□□ -0.22
BRCA1-225ENST00000586385 CDY2AQ9Y6F7 541 aa13.69□□□□□ -0.22
BRCA1-225ENST00000586385 MRPL42Q9Y6G3 142 aaKnown RBP13.69□□□□□ -0.22
BRCA1-225ENST00000586385 RALGAPA2Q2PPJ7 1873 aa13.68□□□□□ -0.22
BRCA1-225ENST00000586385 NLRC5Q86WI3 1866 aa13.68□□□□□ -0.22
BRCA1-225ENST00000586385 SGSM2O43147 1006 aa13.68□□□□□ -0.22
BRCA1-225ENST00000586385 CSPG5O95196 566 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms