RNA–Protein interactions for RNA: ENST00000585395.6

LSM7-202, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-202ENST00000585395 NFRKBQ6P4R8 1299 aa26.26■■□□□ 1.79
LSM7-202ENST00000585395 PPP1R13LQ8WUF5 828 aa26.26■■□□□ 1.79
LSM7-202ENST00000585395 PRDM12Q9H4Q4 367 aa26.26■■□□□ 1.79
LSM7-202ENST00000585395 MAFGO15525 162 aa26.25■■□□□ 1.79
LSM7-202ENST00000585395 ZNF286BP0CG31 522 aa26.25■■□□□ 1.79
LSM7-202ENST00000585395 ICAM3P32942 547 aa26.25■■□□□ 1.79
LSM7-202ENST00000585395 ARHGAP4P98171 946 aa26.25■■□□□ 1.79
LSM7-202ENST00000585395 CUL4AQ13619 759 aa26.25■■□□□ 1.79
LSM7-202ENST00000585395 RASIP1Q5U651 963 aa26.25■■□□□ 1.79
LSM7-202ENST00000585395 KRT40Q6A162 431 aa26.25■■□□□ 1.79
LSM7-202ENST00000585395 GPRASP2Q96D09 838 aa26.25■■□□□ 1.79
LSM7-202ENST00000585395 PGBD1Q96JS3 809 aa26.25■■□□□ 1.79
LSM7-202ENST00000585395 TRMT13Q9NUP7 481 aaKnown RBP26.25■■□□□ 1.79
LSM7-202ENST00000585395 DOCK5Q9H7D0 1870 aa26.25■■□□□ 1.79
LSM7-202ENST00000585395 SPATA31C2B4DYI2 1134 aa26.24■■□□□ 1.79
LSM7-202ENST00000585395 MMP1P03956 469 aa26.24■■□□□ 1.79
LSM7-202ENST00000585395 CYP2C18P33260 490 aa26.24■■□□□ 1.79
LSM7-202ENST00000585395 PBX2P40425 430 aa26.24■■□□□ 1.79
LSM7-202ENST00000585395 PSEN2P49810 448 aa26.24■■□□□ 1.79
LSM7-202ENST00000585395 SP2Q02086 613 aa26.24■■□□□ 1.79
LSM7-202ENST00000585395 SP4Q02446 784 aa26.24■■□□□ 1.79
LSM7-202ENST00000585395 PTPN11Q06124 597 aaPredicted RBP26.24■■□□□ 1.79
LSM7-202ENST00000585395 NONOQ15233 471 aaKnown RBP eCLIP26.24■■□□□ 1.79
LSM7-202ENST00000585395 TMEM240Q5SV17 173 aa26.24■■□□□ 1.79
LSM7-202ENST00000585395 CYFIP1Q7L576 1253 aa26.24■■□□□ 1.79
LSM7-202ENST00000585395 C7orf31Q8N865 590 aa26.24■■□□□ 1.79
LSM7-202ENST00000585395 GIMAP8Q8ND71 665 aaPredicted RBP26.24■■□□□ 1.79
LSM7-202ENST00000585395 INTS4Q96HW7 963 aaKnown RBP26.24■■□□□ 1.79
LSM7-202ENST00000585395 CYP3A4P08684 503 aa26.23■■□□□ 1.79
LSM7-202ENST00000585395 GNL2Q13823 731 aaKnown RBP26.23■■□□□ 1.79
LSM7-202ENST00000585395 HSDL1Q3SXM5 330 aa26.23■■□□□ 1.79
LSM7-202ENST00000585395 C16orf59Q7L2K0 433 aa26.23■■□□□ 1.79
LSM7-202ENST00000585395 RASGRP4Q8TDF6 673 aa26.23■■□□□ 1.79
LSM7-202ENST00000585395 NAP1L4Q99733 375 aaKnown RBP26.23■■□□□ 1.79
LSM7-202ENST00000585395 PKD2L1Q9P0L9 805 aa26.23■■□□□ 1.79
LSM7-202ENST00000585395 PPFIA4O75335 1185 aa26.22■■□□□ 1.79
LSM7-202ENST00000585395 CYP2C9P11712 490 aa26.22■■□□□ 1.79
LSM7-202ENST00000585395 GJB2P29033 226 aa26.22■■□□□ 1.79
LSM7-202ENST00000585395 USP11P51784 963 aa26.22■■□□□ 1.79
LSM7-202ENST00000585395 MTMR1Q13613 665 aa26.22■■□□□ 1.79
LSM7-202ENST00000585395 MFSD10Q14728 455 aa26.22■■□□□ 1.79
LSM7-202ENST00000585395 METTL7BQ6UX53 244 aa26.22■■□□□ 1.79
LSM7-202ENST00000585395 NIPA1Q7RTP0 329 aa26.22■■□□□ 1.79
LSM7-202ENST00000585395 MXRA8Q9BRK3 442 aa26.22■■□□□ 1.79
LSM7-202ENST00000585395 JADE2Q9NQC1 790 aa26.22■■□□□ 1.79
LSM7-202ENST00000585395 UBIAD1Q9Y5Z9 338 aa26.22■■□□□ 1.79
LSM7-202ENST00000585395 GRXCR1A8MXD5 290 aa26.21■■□□□ 1.79
LSM7-202ENST00000585395 DTNBO60941 627 aa26.21■■□□□ 1.79
LSM7-202ENST00000585395 HSP90AA1P07900 732 aaKnown RBP26.21■■□□□ 1.79
LSM7-202ENST00000585395 CSF2RAP15509 400 aa26.21■■□□□ 1.79
LSM7-202ENST00000585395 PDCP20941 246 aa26.21■■□□□ 1.79
LSM7-202ENST00000585395 FOSBP53539 338 aa26.21■■□□□ 1.79
LSM7-202ENST00000585395 CCL23P55773 120 aa26.21■■□□□ 1.79
LSM7-202ENST00000585395 SETQ01105 290 aaPredicted RBP26.21■■□□□ 1.79
LSM7-202ENST00000585395 RAB30Q15771 203 aa26.21■■□□□ 1.79
LSM7-202ENST00000585395 KIAA0753Q2KHM9 967 aa26.21■■□□□ 1.79
LSM7-202ENST00000585395 CEP55Q53EZ4 464 aa26.21■■□□□ 1.79
LSM7-202ENST00000585395 PSRC1Q6PGN9 363 aaPredicted RBP26.21■■□□□ 1.79
LSM7-202ENST00000585395 DIS3L2Q8IYB7 885 aaKnown RBP26.21■■□□□ 1.79
LSM7-202ENST00000585395 FBXO18Q8NFZ0 1043 aa26.21■■□□□ 1.79
LSM7-202ENST00000585395 NOC4LQ9BVI4 516 aaKnown RBP26.21■■□□□ 1.79
LSM7-202ENST00000585395 MSRAQ9UJ68 235 aa26.21■■□□□ 1.79
LSM7-202ENST00000585395 CHD7Q9P2D1 2997 aa26.2■■□□□ 1.79
LSM7-202ENST00000585395 M0R2N6 131 aa26.2■■□□□ 1.78
LSM7-202ENST00000585395 SEMA3FQ13275 785 aa26.2■■□□□ 1.78
LSM7-202ENST00000585395 ADGRE1Q14246 886 aa26.2■■□□□ 1.78
LSM7-202ENST00000585395 NPY5RQ15761 445 aa26.2■■□□□ 1.78
LSM7-202ENST00000585395 PTGISQ16647 500 aa26.2■■□□□ 1.78
LSM7-202ENST00000585395 CCDC155Q8N6L0 562 aa26.2■■□□□ 1.78
LSM7-202ENST00000585395 RETREG2Q8NC44 543 aa26.2■■□□□ 1.78
LSM7-202ENST00000585395 TBCKQ8TEA7 893 aa26.2■■□□□ 1.78
LSM7-202ENST00000585395 KAT2BQ92831 832 aa26.2■■□□□ 1.78
LSM7-202ENST00000585395 SENP7Q9BQF6 1050 aa26.2■■□□□ 1.78
LSM7-202ENST00000585395 C1QTNF1Q9BXJ1 281 aa26.2■■□□□ 1.78
LSM7-202ENST00000585395 TSPYL2Q9H2G4 693 aaPredicted RBP26.2■■□□□ 1.78
LSM7-202ENST00000585395 GJB4Q9NTQ9 266 aa26.2■■□□□ 1.78
LSM7-202ENST00000585395 H3BQV1 296 aa26.19■■□□□ 1.78
LSM7-202ENST00000585395 F2P00734 622 aa26.19■■□□□ 1.78
LSM7-202ENST00000585395 CCDC85BQ15834 202 aaPredicted RBP26.19■■□□□ 1.78
LSM7-202ENST00000585395 UMODL1Q5DID0 1318 aa26.18■■□□□ 1.78
LSM7-202ENST00000585395 IGFBP4P22692 258 aa26.18■■□□□ 1.78
LSM7-202ENST00000585395 CIITAP33076 1130 aa26.18■■□□□ 1.78
LSM7-202ENST00000585395 BFSP2Q13515 415 aa26.18■■□□□ 1.78
LSM7-202ENST00000585395 UTP14CQ5TAP6 766 aaKnown RBP26.18■■□□□ 1.78
LSM7-202ENST00000585395 FOXP1Q9H334 677 aaPredicted RBP26.18■■□□□ 1.78
LSM7-202ENST00000585395 ZNF215Q9UL58 517 aaPredicted RBP26.18■■□□□ 1.78
LSM7-202ENST00000585395 LGALS2P05162 132 aa26.17■■□□□ 1.78
LSM7-202ENST00000585395 ITGB5P18084 799 aa26.17■■□□□ 1.78
LSM7-202ENST00000585395 HOXD11P31277 338 aaPredicted RBP26.17■■□□□ 1.78
LSM7-202ENST00000585395 GUCY1B3Q02153 619 aa26.17■■□□□ 1.78
LSM7-202ENST00000585395 BECN1Q14457 450 aa26.17■■□□□ 1.78
LSM7-202ENST00000585395 MOXD1Q6UVY6 613 aa26.17■■□□□ 1.78
LSM7-202ENST00000585395 PIK3AP1Q6ZUJ8 805 aa26.17■■□□□ 1.78
LSM7-202ENST00000585395 ZNF365Q70YC5 407 aa26.17■■□□□ 1.78
LSM7-202ENST00000585395 NEK8Q86SG6 692 aa26.17■■□□□ 1.78
LSM7-202ENST00000585395 PLA2G4DQ86XP0 818 aa26.17■■□□□ 1.78
LSM7-202ENST00000585395 CRYGNQ8WXF5 182 aa26.17■■□□□ 1.78
LSM7-202ENST00000585395 BCAS3Q9H6U6 928 aa26.17■■□□□ 1.78
LSM7-202ENST00000585395 CXXC1Q9P0U4 656 aaPredicted RBP26.17■■□□□ 1.78
LSM7-202ENST00000585395 HDAC6Q9UBN7 1215 aa26.17■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms