RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-223ENST00000584760 PPFIA3O75145 1194 aa15.22■□□□□ 0.03
SREBF1-223ENST00000584760 LGALS2P05162 132 aa15.22■□□□□ 0.03
SREBF1-223ENST00000584760 CA3P07451 260 aa15.22■□□□□ 0.03
SREBF1-223ENST00000584760 SREBF1P36956 1147 aa15.22■□□□□ 0.03
SREBF1-223ENST00000584760 CHMP4BP1P59074 171 aa15.22■□□□□ 0.03
SREBF1-223ENST00000584760 MTMR1Q13613 665 aa15.22■□□□□ 0.03
SREBF1-223ENST00000584760 KIAA0753Q2KHM9 967 aa15.22■□□□□ 0.03
SREBF1-223ENST00000584760 GDF6Q6KF10 455 aaPredicted RBP15.22■□□□□ 0.03
SREBF1-223ENST00000584760 CYFIP1Q7L576 1253 aa15.22■□□□□ 0.03
SREBF1-223ENST00000584760 GPR20Q99678 358 aa15.22■□□□□ 0.03
SREBF1-223ENST00000584760 SLC26A6Q9BXS9 759 aa15.22■□□□□ 0.03
SREBF1-223ENST00000584760 JADE2Q9NQC1 790 aa15.22■□□□□ 0.03
SREBF1-223ENST00000584760 MTCH2Q9Y6C9 303 aa15.22■□□□□ 0.03
SREBF1-223ENST00000584760 MYO9BQ13459 2157 aa15.22■□□□□ 0.03
SREBF1-223ENST00000584760 PITPNM1O00562 1244 aa15.21■□□□□ 0.03
SREBF1-223ENST00000584760 ATP9AO75110 1047 aa15.21■□□□□ 0.03
SREBF1-223ENST00000584760 SEC24BO95487 1268 aa15.21■□□□□ 0.03
SREBF1-223ENST00000584760 AKAP17AQ02040 695 aaKnown RBP15.21■□□□□ 0.03
SREBF1-223ENST00000584760 KRT40Q6A162 431 aa15.21■□□□□ 0.03
SREBF1-223ENST00000584760 GIMAP8Q8ND71 665 aaPredicted RBP15.21■□□□□ 0.03
SREBF1-223ENST00000584760 CCDC12Q8WUD4 166 aaPredicted RBP15.21■□□□□ 0.03
SREBF1-223ENST00000584760 CRYGNQ8WXF5 182 aa15.21■□□□□ 0.03
SREBF1-223ENST00000584760 EPHX3Q9H6B9 360 aa15.21■□□□□ 0.03
SREBF1-223ENST00000584760 HDAC6Q9UBN7 1215 aa15.21■□□□□ 0.03
SREBF1-223ENST00000584760 PTPRSQ13332 1948 aa15.2■□□□□ 0.02
SREBF1-223ENST00000584760 H3BRB1 525 aa15.2■□□□□ 0.02
SREBF1-223ENST00000584760 EIF5BO60841 1220 aaKnown RBP15.2■□□□□ 0.02
SREBF1-223ENST00000584760 HOXC8P31273 242 aa15.2■□□□□ 0.02
SREBF1-223ENST00000584760 HIC1Q14526 733 aa15.2■□□□□ 0.02
SREBF1-223ENST00000584760 PTGISQ16647 500 aa15.2■□□□□ 0.02
SREBF1-223ENST00000584760 TRIM50Q86XT4 487 aa15.2■□□□□ 0.02
SREBF1-223ENST00000584760 REXO1Q8N1G1 1221 aaKnown RBP15.2■□□□□ 0.02
SREBF1-223ENST00000584760 C7orf31Q8N865 590 aa15.2■□□□□ 0.02
SREBF1-223ENST00000584760 CYP2W1Q8TAV3 490 aa15.2■□□□□ 0.02
SREBF1-223ENST00000584760 DHX38Q92620 1227 aaKnown RBP15.2■□□□□ 0.02
SREBF1-223ENST00000584760 MXRA8Q9BRK3 442 aa15.2■□□□□ 0.02
SREBF1-223ENST00000584760 ALG1Q9BT22 464 aa15.2■□□□□ 0.02
SREBF1-223ENST00000584760 TUT1Q9H6E5 874 aaKnown RBP15.2■□□□□ 0.02
SREBF1-223ENST00000584760 C6orf50Q9HD87 102 aa15.2■□□□□ 0.02
SREBF1-223ENST00000584760 VPS54Q9P1Q0 977 aa15.2■□□□□ 0.02
SREBF1-223ENST00000584760 NOD1Q9Y239 953 aa15.2■□□□□ 0.02
SREBF1-223ENST00000584760 SIP14410 1827 aa15.2■□□□□ 0.02
SREBF1-223ENST00000584760 EPOPA6NHQ4 379 aa15.19■□□□□ 0.02
SREBF1-223ENST00000584760 MAFGO15525 162 aa15.19■□□□□ 0.02
SREBF1-223ENST00000584760 PFKMP08237 780 aa15.19■□□□□ 0.02
SREBF1-223ENST00000584760 ACTN1P12814 892 aa15.19■□□□□ 0.02
SREBF1-223ENST00000584760 ARHGAP4P98171 946 aa15.19■□□□□ 0.02
SREBF1-223ENST00000584760 SP4Q02446 784 aa15.19■□□□□ 0.02
SREBF1-223ENST00000584760 RBL2Q08999 1139 aa15.19■□□□□ 0.02
SREBF1-223ENST00000584760 STK3Q13188 491 aa15.19■□□□□ 0.02
SREBF1-223ENST00000584760 CEP55Q53EZ4 464 aa15.19■□□□□ 0.02
SREBF1-223ENST00000584760 JAKMIP3Q5VZ66 844 aa15.19■□□□□ 0.02
SREBF1-223ENST00000584760 TRIM22Q8IYM9 498 aa15.19■□□□□ 0.02
SREBF1-223ENST00000584760 CCDC148Q8NFR7 591 aa15.19■□□□□ 0.02
SREBF1-223ENST00000584760 ARNTL2Q8WYA1 636 aa15.19■□□□□ 0.02
SREBF1-223ENST00000584760 LRFN3Q9BTN0 628 aa15.19■□□□□ 0.02
SREBF1-223ENST00000584760 KCNH7Q9NS40 1196 aa15.19■□□□□ 0.02
SREBF1-223ENST00000584760 PKD2L1Q9P0L9 805 aa15.19■□□□□ 0.02
SREBF1-223ENST00000584760 TPCN1Q9ULQ1 816 aa15.19■□□□□ 0.02
SREBF1-223ENST00000584760 BDP1A6H8Y1 2624 aa15.19■□□□□ 0.02
SREBF1-223ENST00000584760 TCF20Q9UGU0 1960 aaKnown RBP15.18■□□□□ 0.02
SREBF1-223ENST00000584760 CPLX1O14810 134 aa15.18■□□□□ 0.02
SREBF1-223ENST00000584760 POU3F3P20264 500 aaPredicted RBP15.18■□□□□ 0.02
SREBF1-223ENST00000584760 GNA11P29992 359 aa15.18■□□□□ 0.02
SREBF1-223ENST00000584760 AK2P54819 239 aa15.18■□□□□ 0.02
SREBF1-223ENST00000584760 SCRN1Q12765 414 aa15.18■□□□□ 0.02
SREBF1-223ENST00000584760 BFSP2Q13515 415 aa15.18■□□□□ 0.02
SREBF1-223ENST00000584760 C8orf34Q49A92 452 aa15.18■□□□□ 0.02
SREBF1-223ENST00000584760 MCTP2Q6DN12 878 aa15.18■□□□□ 0.02
SREBF1-223ENST00000584760 NIPA1Q7RTP0 329 aa15.18■□□□□ 0.02
SREBF1-223ENST00000584760 CAGE1Q8TC20 777 aa15.18■□□□□ 0.02
SREBF1-223ENST00000584760 FTOQ9C0B1 505 aaKnown RBP eCLIP15.18■□□□□ 0.021e-6■■■■■ 30.7
SREBF1-223ENST00000584760 SH3GLB2Q9NR46 395 aa15.18■□□□□ 0.02
SREBF1-223ENST00000584760 NFASCO94856 1347 aa15.17■□□□□ 0.02
SREBF1-223ENST00000584760 MYH9P35579 1960 aaKnown RBP15.17■□□□□ 0.02
SREBF1-223ENST00000584760 IGLV3-22A0A075B6J6 115 aa15.17■□□□□ 0.02
SREBF1-223ENST00000584760 GSTTP1A0A1W2PQM5 241 aa15.17■□□□□ 0.02
SREBF1-223ENST00000584760 FAM86B1E9PN63 330 aa15.17■□□□□ 0.02
SREBF1-223ENST00000584760 MEIS1O00470 390 aa15.17■□□□□ 0.02
SREBF1-223ENST00000584760 TLL1O43897 1013 aa15.17■□□□□ 0.02
SREBF1-223ENST00000584760 PFKFB2O60825 505 aa15.17■□□□□ 0.02
SREBF1-223ENST00000584760 ARHGEF15O94989 841 aa15.17■□□□□ 0.02
SREBF1-223ENST00000584760 DEXIO95424 95 aa15.17■□□□□ 0.02
SREBF1-223ENST00000584760 CYP3A4P08684 503 aa15.17■□□□□ 0.02
SREBF1-223ENST00000584760 FAM86B2P0C5J1 330 aa15.17■□□□□ 0.02
SREBF1-223ENST00000584760 IQCF3P0C7M6 154 aa15.17■□□□□ 0.02
SREBF1-223ENST00000584760 SMIM10L2AP0DMW4 78 aa15.17■□□□□ 0.02
SREBF1-223ENST00000584760 SMIM10L2BP0DMW5 78 aa15.17■□□□□ 0.02
SREBF1-223ENST00000584760 ARP10275 920 aa15.17■□□□□ 0.02
SREBF1-223ENST00000584760 RFC2P35250 354 aa15.17■□□□□ 0.02
SREBF1-223ENST00000584760 TCF7P36402 384 aaPredicted RBP15.17■□□□□ 0.02
SREBF1-223ENST00000584760 ZNF200P98182 395 aaPredicted RBP15.17■□□□□ 0.02
SREBF1-223ENST00000584760 TAP1Q03518 808 aa15.17■□□□□ 0.02
SREBF1-223ENST00000584760 SSRP1Q08945 709 aaKnown RBP15.17■□□□□ 0.02
SREBF1-223ENST00000584760 ITGB3BPQ13352 177 aaPredicted RBP15.17■□□□□ 0.02
SREBF1-223ENST00000584760 CPLX2Q6PUV4 134 aaKnown RBP15.17■□□□□ 0.02
SREBF1-223ENST00000584760 RETREG2Q8NC44 543 aa15.17■□□□□ 0.02
SREBF1-223ENST00000584760 BICD2Q8TD16 824 aa15.17■□□□□ 0.02
SREBF1-223ENST00000584760 RASGRP4Q8TDF6 673 aa15.17■□□□□ 0.02
SREBF1-223ENST00000584760 AFAP1L1Q8TED9 768 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms