RNA–Protein interactions for RNA: ENST00000584620.5

PGAP3-209, Transcript of post-GPI attachment to proteins 3, humanhuman

TSL 3

Gene PGAP3, Length 804 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-209ENST00000584620 IKBKEQ14164 716 aa12.48□□□□□ -0.41
PGAP3-209ENST00000584620 METTL7BQ6UX53 244 aa12.48□□□□□ -0.41
PGAP3-209ENST00000584620 CYFIP1Q7L576 1253 aa12.48□□□□□ -0.41
PGAP3-209ENST00000584620 TRIM50Q86XT4 487 aa12.48□□□□□ -0.41
PGAP3-209ENST00000584620 SRBD1Q8N5C6 995 aaKnown RBP12.48□□□□□ -0.41
PGAP3-209ENST00000584620 FBXO22Q8NEZ5 403 aa12.48□□□□□ -0.41
PGAP3-209ENST00000584620 DBF4BQ8NFT6 615 aa12.48□□□□□ -0.41
PGAP3-209ENST00000584620 ATP6V0A1Q93050 837 aa12.48□□□□□ -0.41
PGAP3-209ENST00000584620 PBXIP1Q96AQ6 731 aa12.48□□□□□ -0.41
PGAP3-209ENST00000584620 GPR20Q99678 358 aa12.48□□□□□ -0.41
PGAP3-209ENST00000584620 LSG1Q9H089 658 aaKnown RBP12.48□□□□□ -0.41
PGAP3-209ENST00000584620 RNPEPQ9H4A4 650 aa12.48□□□□□ -0.41
PGAP3-209ENST00000584620 RSPH10B2B2RC85 870 aa12.47□□□□□ -0.41
PGAP3-209ENST00000584620 PIK3CDO00329 1044 aa12.47□□□□□ -0.41
PGAP3-209ENST00000584620 SH2B2O14492 632 aaPredicted RBP12.47□□□□□ -0.41
PGAP3-209ENST00000584620 FIBPO43427 364 aa12.47□□□□□ -0.41
PGAP3-209ENST00000584620 PRC1O43663 620 aa12.47□□□□□ -0.41
PGAP3-209ENST00000584620 EFCAB14O75071 495 aa12.47□□□□□ -0.41
PGAP3-209ENST00000584620 DDAH1O94760 285 aa12.47□□□□□ -0.41
PGAP3-209ENST00000584620 RSPH10BP0C881 870 aa12.47□□□□□ -0.41
PGAP3-209ENST00000584620 SMARCA1P28370 1054 aa12.47□□□□□ -0.41
PGAP3-209ENST00000584620 ADAM17P78536 824 aa12.47□□□□□ -0.41
PGAP3-209ENST00000584620 NEDD9Q14511 834 aa12.47□□□□□ -0.41
PGAP3-209ENST00000584620 CLUL1Q15846 466 aa12.47□□□□□ -0.41
PGAP3-209ENST00000584620 GNPTABQ3T906 1256 aa12.47□□□□□ -0.41
PGAP3-209ENST00000584620 PLEKHG4Q58EX7 1191 aa12.47□□□□□ -0.41
PGAP3-209ENST00000584620 HERC4Q5GLZ8 1057 aaPredicted RBP12.47□□□□□ -0.41
PGAP3-209ENST00000584620 TCEAL5Q5H9L2 206 aa12.47□□□□□ -0.41
PGAP3-209ENST00000584620 PCNX4Q63HM2 1172 aa12.47□□□□□ -0.41
PGAP3-209ENST00000584620 RNF135Q8IUD6 432 aa12.47□□□□□ -0.41
PGAP3-209ENST00000584620 CMTR1Q8N1G2 835 aaKnown RBP12.47□□□□□ -0.41
PGAP3-209ENST00000584620 RRP36Q96EU6 259 aaKnown RBP12.47□□□□□ -0.41
PGAP3-209ENST00000584620 MTA3Q9BTC8 594 aa12.47□□□□□ -0.41
PGAP3-209ENST00000584620 USP26Q9BXU7 913 aa12.47□□□□□ -0.41
PGAP3-209ENST00000584620 SETD4Q9NVD3 440 aa12.47□□□□□ -0.41
PGAP3-209ENST00000584620 FAM50BQ9Y247 325 aa12.47□□□□□ -0.41
PGAP3-209ENST00000584620 BAZ2BQ9UIF8 2168 aaKnown RBP12.47□□□□□ -0.41
PGAP3-209ENST00000584620 USP34Q70CQ2 3546 aa12.47□□□□□ -0.41
PGAP3-209ENST00000584620 MYO7AQ13402 2215 aa12.46□□□□□ -0.41
PGAP3-209ENST00000584620 EMSYQ7Z589 1322 aa12.46□□□□□ -0.41
PGAP3-209ENST00000584620 TMEM221A6NGB7 291 aa12.46□□□□□ -0.41
PGAP3-209ENST00000584620 M0R296 226 aa12.46□□□□□ -0.41
PGAP3-209ENST00000584620 NOP56O00567 594 aaKnown RBP12.46□□□□□ -0.41
PGAP3-209ENST00000584620 SLC27A2O14975 620 aa12.46□□□□□ -0.41
PGAP3-209ENST00000584620 RXRAP19793 462 aa12.46□□□□□ -0.41
PGAP3-209ENST00000584620 BANK1Q8NDB2 785 aa12.46□□□□□ -0.41
PGAP3-209ENST00000584620 CTCFLQ8NI51 663 aaPredicted RBP12.46□□□□□ -0.41
PGAP3-209ENST00000584620 EDAQ92838 391 aa12.46□□□□□ -0.41
PGAP3-209ENST00000584620 PABPC5Q96DU9 382 aaKnown RBP12.46□□□□□ -0.41
PGAP3-209ENST00000584620 MRPL38Q96DV4 380 aaKnown RBP12.46□□□□□ -0.41
PGAP3-209ENST00000584620 SENP7Q9BQF6 1050 aa12.46□□□□□ -0.41
PGAP3-209ENST00000584620 CLDND1Q9NY35 253 aa12.46□□□□□ -0.41
PGAP3-209ENST00000584620 hCG_1642624A0A1W2PR95 340 aa12.45□□□□□ -0.42
PGAP3-209ENST00000584620 ATP9AO75110 1047 aa12.45□□□□□ -0.42
PGAP3-209ENST00000584620 CTSHP09668 335 aa12.45□□□□□ -0.42
PGAP3-209ENST00000584620 ITGB5P18084 799 aa12.45□□□□□ -0.42
PGAP3-209ENST00000584620 KIF5BP33176 963 aa12.45□□□□□ -0.42
PGAP3-209ENST00000584620 MCM5P33992 734 aa12.45□□□□□ -0.42
PGAP3-209ENST00000584620 HTRA4P83105 476 aaPredicted RBP12.45□□□□□ -0.42
PGAP3-209ENST00000584620 NECTIN1Q15223 517 aa12.45□□□□□ -0.42
PGAP3-209ENST00000584620 XRRA1Q6P2D8 792 aa12.45□□□□□ -0.42
PGAP3-209ENST00000584620 CASC1Q6TDU7 716 aa12.45□□□□□ -0.42
PGAP3-209ENST00000584620 SMARCC2Q8TAQ2 1214 aa12.45□□□□□ -0.42
PGAP3-209ENST00000584620 SP7Q8TDD2 431 aaPredicted RBP12.45□□□□□ -0.42
PGAP3-209ENST00000584620 ATOH1Q92858 354 aaPredicted RBP12.45□□□□□ -0.42
PGAP3-209ENST00000584620 LZTS2Q9BRK4 669 aa12.45□□□□□ -0.42
PGAP3-209ENST00000584620 ESYT1Q9BSJ8 1104 aa12.45□□□□□ -0.42
PGAP3-209ENST00000584620 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.44□□□□□ -0.42
PGAP3-209ENST00000584620 CAND2O75155 1236 aa12.44□□□□□ -0.42
PGAP3-209ENST00000584620 KCNA2P16389 499 aa12.44□□□□□ -0.42
PGAP3-209ENST00000584620 LTBRP36941 435 aa12.44□□□□□ -0.42
PGAP3-209ENST00000584620 LIFRP42702 1097 aa12.44□□□□□ -0.42
PGAP3-209ENST00000584620 GNAQP50148 359 aa12.44□□□□□ -0.42
PGAP3-209ENST00000584620 SP4Q02446 784 aa12.44□□□□□ -0.42
PGAP3-209ENST00000584620 PTPROQ16827 1216 aa12.44□□□□□ -0.42
PGAP3-209ENST00000584620 FAM26DQ5JW98 314 aa12.44□□□□□ -0.42
PGAP3-209ENST00000584620 UTP14CQ5TAP6 766 aaKnown RBP12.44□□□□□ -0.42
PGAP3-209ENST00000584620 CREB3L3Q68CJ9 461 aa12.44□□□□□ -0.42
PGAP3-209ENST00000584620 TRIM67Q6ZTA4 783 aa12.44□□□□□ -0.42
PGAP3-209ENST00000584620 BMP8AQ7Z5Y6 402 aa12.44□□□□□ -0.42
PGAP3-209ENST00000584620 RAB11FIP4Q86YS3 637 aa12.44□□□□□ -0.42
PGAP3-209ENST00000584620 SUGP1Q8IWZ8 645 aaKnown RBP12.44□□□□□ -0.42
PGAP3-209ENST00000584620 MYOCDQ8IZQ8 938 aa12.44□□□□□ -0.42
PGAP3-209ENST00000584620 TMTC2Q8N394 836 aa12.44□□□□□ -0.42
PGAP3-209ENST00000584620 LMBR1Q8WVP7 490 aa12.44□□□□□ -0.42
PGAP3-209ENST00000584620 CUL5Q93034 780 aa12.44□□□□□ -0.42
PGAP3-209ENST00000584620 TMEM87BQ96K49 555 aa12.44□□□□□ -0.42
PGAP3-209ENST00000584620 PRRX2Q99811 253 aa12.44□□□□□ -0.42
PGAP3-209ENST00000584620 LRRC2Q9BYS8 371 aa12.44□□□□□ -0.42
PGAP3-209ENST00000584620 ALG13Q9NP73 1137 aaKnown RBP12.44□□□□□ -0.42
PGAP3-209ENST00000584620 SEC63Q9UGP8 760 aaKnown RBP12.44□□□□□ -0.42
PGAP3-209ENST00000584620 INSL6Q9Y581 213 aa12.44□□□□□ -0.42
PGAP3-209ENST00000584620 ZFHX2Q9C0A1 2572 aaPredicted RBP12.44□□□□□ -0.42
PGAP3-209ENST00000584620 SPTBN4Q9H254 2564 aa12.43□□□□□ -0.42
PGAP3-209ENST00000584620 MYH6P13533 1939 aa12.43□□□□□ -0.42
PGAP3-209ENST00000584620 GSTTP1A0A1W2PQM5 241 aa12.43□□□□□ -0.42
PGAP3-209ENST00000584620 CCDC69A6NI79 296 aa12.43□□□□□ -0.42
PGAP3-209ENST00000584620 AMHP03971 560 aa12.43□□□□□ -0.42
PGAP3-209ENST00000584620 ARHGAP4P98171 946 aa12.43□□□□□ -0.42
PGAP3-209ENST00000584620 DLX2Q07687 328 aaPredicted RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms