RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 TLK2Q86UE8 772 aa20.6■□□□□ 0.89
RFFL-211ENST00000584541 CLIC6Q96NY7 704 aa20.6■□□□□ 0.89
RFFL-211ENST00000584541 SPC25Q9HBM1 224 aa20.6■□□□□ 0.89
RFFL-211ENST00000584541 PCDH10Q9P2E7 1040 aa20.6■□□□□ 0.89
RFFL-211ENST00000584541 GNEQ9Y223 722 aaKnown RBP20.6■□□□□ 0.89
RFFL-211ENST00000584541 FRMPD3Q5JV73 1810 aa20.6■□□□□ 0.89
RFFL-211ENST00000584541 MYH9P35579 1960 aaKnown RBP20.59■□□□□ 0.89
RFFL-211ENST00000584541 DYNC1LI2O43237 492 aaPredicted RBP20.59■□□□□ 0.89
RFFL-211ENST00000584541 ACTR2P61160 394 aa20.59■□□□□ 0.89
RFFL-211ENST00000584541 GRIN1Q05586 938 aa20.59■□□□□ 0.89
RFFL-211ENST00000584541 SPIRE1Q08AE8 756 aa20.59■□□□□ 0.89
RFFL-211ENST00000584541 BRDTQ58F21 947 aaPredicted RBP20.59■□□□□ 0.89
RFFL-211ENST00000584541 TMEM63BQ5T3F8 832 aa20.59■□□□□ 0.89
RFFL-211ENST00000584541 HAUS3Q68CZ6 603 aa20.59■□□□□ 0.89
RFFL-211ENST00000584541 MIS18BP1Q6P0N0 1132 aa20.59■□□□□ 0.89
RFFL-211ENST00000584541 B3GNT9Q6UX72 402 aa20.59■□□□□ 0.89
RFFL-211ENST00000584541 BCAS3Q9H6U6 928 aa20.59■□□□□ 0.89
RFFL-211ENST00000584541 DISC1Q9NRI5 854 aa20.59■□□□□ 0.89
RFFL-211ENST00000584541 DDX20Q9UHI6 824 aaKnown RBP20.59■□□□□ 0.89
RFFL-211ENST00000584541 PCDHA10Q9Y5I2 948 aa20.59■□□□□ 0.89
RFFL-211ENST00000584541 ADCY6O43306 1168 aa20.58■□□□□ 0.89
RFFL-211ENST00000584541 PSAPP07602 524 aa20.58■□□□□ 0.89
RFFL-211ENST00000584541 UBA7P41226 1012 aa20.58■□□□□ 0.89
RFFL-211ENST00000584541 EPHA7Q15375 998 aa20.58■□□□□ 0.89
RFFL-211ENST00000584541 AXDND1Q5T1B0 1012 aaPredicted RBP20.58■□□□□ 0.89
RFFL-211ENST00000584541 KRT79Q5XKE5 535 aa20.58■□□□□ 0.89
RFFL-211ENST00000584541 PPTC7Q8NI37 304 aa20.58■□□□□ 0.89
RFFL-211ENST00000584541 SEPT1Q8WYJ6 367 aa20.58■□□□□ 0.89
RFFL-211ENST00000584541 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.58■□□□□ 0.897e-8■■■■■ 32.9
RFFL-211ENST00000584541 FAM13BQ9NYF5 915 aa20.58■□□□□ 0.89
RFFL-211ENST00000584541 EML1O00423 815 aa20.57■□□□□ 0.88
RFFL-211ENST00000584541 PRPF40AO75400 957 aaKnown RBP20.57■□□□□ 0.88
RFFL-211ENST00000584541 CCNE2O96020 404 aa20.57■□□□□ 0.88
RFFL-211ENST00000584541 CPT1AP50416 773 aa20.57■□□□□ 0.88
RFFL-211ENST00000584541 HSDL1Q3SXM5 330 aa20.57■□□□□ 0.88
RFFL-211ENST00000584541 TPRNQ4KMQ1 711 aa20.57■□□□□ 0.88
RFFL-211ENST00000584541 RASSF8Q8NHQ8 419 aa20.57■□□□□ 0.88
RFFL-211ENST00000584541 NEK9Q8TD19 979 aa20.57■□□□□ 0.88
RFFL-211ENST00000584541 AFG1LQ8WV93 481 aa20.57■□□□□ 0.88
RFFL-211ENST00000584541 LENG1Q96BZ8 264 aaPredicted RBP20.57■□□□□ 0.88
RFFL-211ENST00000584541 GPR20Q99678 358 aa20.57■□□□□ 0.88
RFFL-211ENST00000584541 XPNPEP3Q9NQH7 507 aa20.57■□□□□ 0.88
RFFL-211ENST00000584541 A0A1W2PQ27 194 aa20.56■□□□□ 0.88
RFFL-211ENST00000584541 A0A1W2PQ64 194 aa20.56■□□□□ 0.88
RFFL-211ENST00000584541 A0A1W2PQD8 194 aa20.56■□□□□ 0.88
RFFL-211ENST00000584541 SLC26A4O43511 780 aa20.56■□□□□ 0.88
RFFL-211ENST00000584541 ATG7O95352 703 aa20.56■□□□□ 0.88
RFFL-211ENST00000584541 SUPT20HL2P0C7V6 817 aa20.56■□□□□ 0.88
RFFL-211ENST00000584541 SPECC1Q5M775 1068 aa20.56■□□□□ 0.88
RFFL-211ENST00000584541 CABP7Q86V35 215 aa20.56■□□□□ 0.88
RFFL-211ENST00000584541 SNX29Q8TEQ0 813 aa20.56■□□□□ 0.88
RFFL-211ENST00000584541 EIF2AK1Q9BQI3 630 aaKnown RBP20.56■□□□□ 0.88
RFFL-211ENST00000584541 KDM3AQ9Y4C1 1321 aa20.55■□□□□ 0.88
RFFL-211ENST00000584541 LOXHD1Q8IVV2 1947 aa20.55■□□□□ 0.88
RFFL-211ENST00000584541 GSTTP1A0A1W2PQM5 241 aa20.55■□□□□ 0.88
RFFL-211ENST00000584541 PP2D1A8MPX8 630 aa20.55■□□□□ 0.88
RFFL-211ENST00000584541 BACH1O14867 736 aa20.55■□□□□ 0.88
RFFL-211ENST00000584541 DKC1O60832 514 aaKnown RBP eCLIP20.55■□□□□ 0.88
RFFL-211ENST00000584541 C6orf222P0C671 652 aaPredicted RBP20.55■□□□□ 0.88
RFFL-211ENST00000584541 CCL5P13501 91 aa20.55■□□□□ 0.88
RFFL-211ENST00000584541 PTGS1P23219 599 aa20.55■□□□□ 0.88
RFFL-211ENST00000584541 CMA1P23946 247 aa20.55■□□□□ 0.88
RFFL-211ENST00000584541 TCF7P36402 384 aaPredicted RBP20.55■□□□□ 0.88
RFFL-211ENST00000584541 CCT6AP40227 531 aaKnown RBP20.55■□□□□ 0.88
RFFL-211ENST00000584541 GJA9P57773 515 aa20.55■□□□□ 0.88
RFFL-211ENST00000584541 UBE2HP62256 183 aa20.55■□□□□ 0.88
RFFL-211ENST00000584541 DGKDQ16760 1214 aa20.55■□□□□ 0.88
RFFL-211ENST00000584541 FAM160B1Q5W0V3 765 aa20.55■□□□□ 0.88
RFFL-211ENST00000584541 RESP18Q5W5W9 173 aa20.55■□□□□ 0.88
RFFL-211ENST00000584541 SHC4Q6S5L8 630 aa20.55■□□□□ 0.88
RFFL-211ENST00000584541 ABHD15Q6UXT9 468 aa20.55■□□□□ 0.88
RFFL-211ENST00000584541 SYMPKQ92797 1274 aaKnown RBP20.55■□□□□ 0.88
RFFL-211ENST00000584541 ARMC5Q96C12 935 aa20.55■□□□□ 0.88
RFFL-211ENST00000584541 CALML4Q96GE6 196 aa20.55■□□□□ 0.88
RFFL-211ENST00000584541 CDK5RAP3Q96JB5 506 aa20.55■□□□□ 0.88
RFFL-211ENST00000584541 CCSER1Q9C0I3 900 aa20.55■□□□□ 0.88
RFFL-211ENST00000584541 UNC93B1Q9H1C4 597 aa20.55■□□□□ 0.88
RFFL-211ENST00000584541 UPF3AQ9H1J1 476 aaKnown RBP20.55■□□□□ 0.88
RFFL-211ENST00000584541 AZI2Q9H6S1 392 aa20.55■□□□□ 0.88
RFFL-211ENST00000584541 TUFT1Q9NNX1 390 aa20.55■□□□□ 0.88
RFFL-211ENST00000584541 CCDC39Q9UFE4 941 aa20.55■□□□□ 0.88
RFFL-211ENST00000584541 SYNRGQ9UMZ2 1314 aa20.54■□□□□ 0.88
RFFL-211ENST00000584541 DDX11L8A8MPP1 907 aa20.54■□□□□ 0.88
RFFL-211ENST00000584541 ZEB2O60315 1214 aa20.54■□□□□ 0.88
RFFL-211ENST00000584541 PPFIA4O75335 1185 aa20.54■□□□□ 0.88
RFFL-211ENST00000584541 P4HBP07237 508 aaKnown RBP20.54■□□□□ 0.88
RFFL-211ENST00000584541 MMP3P08254 477 aa20.54■□□□□ 0.88
RFFL-211ENST00000584541 CDC25AP30304 524 aa20.54■□□□□ 0.88
RFFL-211ENST00000584541 FSCN1Q16658 493 aaKnown RBP20.54■□□□□ 0.88
RFFL-211ENST00000584541 MRPS27Q92552 414 aaKnown RBP20.54■□□□□ 0.88
RFFL-211ENST00000584541 ATP6V0A1Q93050 837 aa20.54■□□□□ 0.88
RFFL-211ENST00000584541 EPSTI1Q96J88 318 aa20.54■□□□□ 0.88
RFFL-211ENST00000584541 ZNF333Q96JL9 665 aa20.54■□□□□ 0.88
RFFL-211ENST00000584541 POLR3CQ9BUI4 534 aaPredicted RBP20.54■□□□□ 0.88
RFFL-211ENST00000584541 RNF208Q9H0X6 261 aa20.54■□□□□ 0.88
RFFL-211ENST00000584541 A6NJR5 290 aa20.53■□□□□ 0.88
RFFL-211ENST00000584541 KPNA6O60684 536 aa20.53■□□□□ 0.88
RFFL-211ENST00000584541 MYCP01106 439 aaPredicted RBP20.53■□□□□ 0.88
RFFL-211ENST00000584541 PTMSP20962 102 aa20.53■□□□□ 0.88
RFFL-211ENST00000584541 RPA1P27694 616 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms