RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 MIB1Q86YT6 1006 aa5.74□□□□□ -1.49
PPP4R1-227ENST00000583988 LINC00482Q8N8I6 264 aa5.74□□□□□ -1.49
PPP4R1-227ENST00000583988 KRTAP4-2Q9BYR5 136 aa5.74□□□□□ -1.49
PPP4R1-227ENST00000583988 IPPKQ9H8X2 491 aa5.74□□□□□ -1.49
PPP4R1-227ENST00000583988 TRIM39Q9HCM9 518 aa5.74□□□□□ -1.49
PPP4R1-227ENST00000583988 SLC6A20Q9NP91 592 aa5.74□□□□□ -1.49
PPP4R1-227ENST00000583988 GSTA4O15217 222 aa5.73□□□□□ -1.49
PPP4R1-227ENST00000583988 NOBOXO60393 691 aa5.73□□□□□ -1.49
PPP4R1-227ENST00000583988 KCNA6P17658 529 aa5.73□□□□□ -1.49
PPP4R1-227ENST00000583988 SPIRE1Q08AE8 756 aa5.73□□□□□ -1.49
PPP4R1-227ENST00000583988 PABPC4Q13310 644 aaKnown RBP eCLIP5.73□□□□□ -1.49
PPP4R1-227ENST00000583988 DALRD3Q5D0E6 543 aaKnown RBP5.73□□□□□ -1.49
PPP4R1-227ENST00000583988 CYP4F22Q6NT55 531 aa5.73□□□□□ -1.49
PPP4R1-227ENST00000583988 C16orf59Q7L2K0 433 aa5.73□□□□□ -1.49
PPP4R1-227ENST00000583988 OTOP3Q7RTS5 596 aa5.73□□□□□ -1.49
PPP4R1-227ENST00000583988 PRRT2Q7Z6L0 340 aaPredicted RBP5.73□□□□□ -1.49
PPP4R1-227ENST00000583988 ZNF761Q86XN6 746 aaPredicted RBP5.73□□□□□ -1.49
PPP4R1-227ENST00000583988 FAM126BQ8IXS8 530 aa5.73□□□□□ -1.49
PPP4R1-227ENST00000583988 KYQ8NBH2 561 aa5.73□□□□□ -1.49
PPP4R1-227ENST00000583988 KCNJ15Q99712 375 aa5.73□□□□□ -1.49
PPP4R1-227ENST00000583988 SMOC1Q9H4F8 434 aa5.73□□□□□ -1.49
PPP4R1-227ENST00000583988 PCDH18Q9HCL0 1135 aa5.73□□□□□ -1.49
PPP4R1-227ENST00000583988 MAGEC2Q9UBF1 373 aaPredicted RBP5.73□□□□□ -1.49
PPP4R1-227ENST00000583988 TCRBV16S1A1N1A0A5B0 115 aa5.72□□□□□ -1.49
PPP4R1-227ENST00000583988 KRIT1O00522 736 aa5.72□□□□□ -1.49
PPP4R1-227ENST00000583988 ASLP04424 464 aa5.72□□□□□ -1.49
PPP4R1-227ENST00000583988 CNR2P34972 360 aa5.72□□□□□ -1.49
PPP4R1-227ENST00000583988 THBS2P35442 1172 aa5.72□□□□□ -1.49
PPP4R1-227ENST00000583988 GYS2P54840 703 aa5.72□□□□□ -1.49
PPP4R1-227ENST00000583988 ITGA1P56199 1179 aa5.72□□□□□ -1.49
PPP4R1-227ENST00000583988 NKX3-2P78367 333 aa5.72□□□□□ -1.49
PPP4R1-227ENST00000583988 CR1LQ2VPA4 569 aa5.72□□□□□ -1.49
PPP4R1-227ENST00000583988 BRAPQ7Z569 592 aa5.72□□□□□ -1.49
PPP4R1-227ENST00000583988 FGD2Q7Z6J4 655 aa5.72□□□□□ -1.49
PPP4R1-227ENST00000583988 ARRDC4Q8NCT1 418 aa5.72□□□□□ -1.49
PPP4R1-227ENST00000583988 PIP4K2CQ8TBX8 421 aa5.72□□□□□ -1.49
PPP4R1-227ENST00000583988 ADAMTS17Q8TE56 1095 aa5.72□□□□□ -1.49
PPP4R1-227ENST00000583988 FBXW5Q969U6 566 aa5.72□□□□□ -1.49
PPP4R1-227ENST00000583988 PDGFDQ9GZP0 370 aaPredicted RBP5.72□□□□□ -1.49
PPP4R1-227ENST00000583988 ZNF652Q9Y2D9 606 aa5.72□□□□□ -1.49
PPP4R1-227ENST00000583988 PCDHB4Q9Y5E5 795 aa5.72□□□□□ -1.49
PPP4R1-227ENST00000583988 CD2APQ9Y5K6 639 aa5.72□□□□□ -1.49
PPP4R1-227ENST00000583988 DUSP10Q9Y6W6 482 aa5.72□□□□□ -1.49
PPP4R1-227ENST00000583988 SBNO2Q9Y2G9 1366 aa5.71□□□□□ -1.5
PPP4R1-227ENST00000583988 NKRFO15226 690 aaKnown RBP eCLIP5.71□□□□□ -1.5
PPP4R1-227ENST00000583988 MAFKO60675 156 aa5.71□□□□□ -1.5
PPP4R1-227ENST00000583988 RASGRP1O95267 797 aa5.71□□□□□ -1.5
PPP4R1-227ENST00000583988 CKMP06732 381 aa5.71□□□□□ -1.5
PPP4R1-227ENST00000583988 SRGAP2CP0DJJ0 459 aa5.71□□□□□ -1.5
PPP4R1-227ENST00000583988 GNAT1P11488 350 aa5.71□□□□□ -1.5
PPP4R1-227ENST00000583988 COL6A2P12110 1019 aa5.71□□□□□ -1.5
PPP4R1-227ENST00000583988 POU3F2P20265 443 aaPredicted RBP5.71□□□□□ -1.5
PPP4R1-227ENST00000583988 TKFCQ3LXA3 575 aa5.71□□□□□ -1.5
PPP4R1-227ENST00000583988 RGL3Q3MIN7 710 aa5.71□□□□□ -1.5
PPP4R1-227ENST00000583988 MCTP2Q6DN12 878 aa5.71□□□□□ -1.5
PPP4R1-227ENST00000583988 ZC3H7AQ8IWR0 971 aaKnown RBP5.71□□□□□ -1.5
PPP4R1-227ENST00000583988 NIM1KQ8IY84 436 aa5.71□□□□□ -1.5
PPP4R1-227ENST00000583988 TTLL6Q8N841 843 aa5.71□□□□□ -1.5
PPP4R1-227ENST00000583988 PHOSPHO1Q8TCT1 267 aa5.71□□□□□ -1.5
PPP4R1-227ENST00000583988 MFSD3Q96ES6 412 aa5.71□□□□□ -1.5
PPP4R1-227ENST00000583988 TOE1Q96GM8 510 aaKnown RBP5.71□□□□□ -1.5
PPP4R1-227ENST00000583988 ZSWIM3Q96MP5 696 aa5.71□□□□□ -1.5
PPP4R1-227ENST00000583988 TCRBV5S2A0A599 114 aa5.7□□□□□ -1.5
PPP4R1-227ENST00000583988 DDX3XO00571 662 aaKnown RBP eCLIP5.7□□□□□ -1.5
PPP4R1-227ENST00000583988 RPL13P26373 211 aaKnown RBP5.7□□□□□ -1.5
PPP4R1-227ENST00000583988 IGFALSP35858 605 aa5.7□□□□□ -1.5
PPP4R1-227ENST00000583988 FLT3P36888 993 aa5.7□□□□□ -1.5
PPP4R1-227ENST00000583988 LACTBP83111 547 aaPredicted RBP5.7□□□□□ -1.5
PPP4R1-227ENST00000583988 TM4SF20Q53R12 229 aa5.7□□□□□ -1.5
PPP4R1-227ENST00000583988 ZFYVE27Q5T4F4 411 aa5.7□□□□□ -1.5
PPP4R1-227ENST00000583988 PRAMEF18Q5VWM3 479 aa5.7□□□□□ -1.5
PPP4R1-227ENST00000583988 OSTM1Q86WC4 334 aa5.7□□□□□ -1.5
PPP4R1-227ENST00000583988 TRIM48Q8IWZ4 208 aa5.7□□□□□ -1.5
PPP4R1-227ENST00000583988 FAM177A1Q8N128 213 aaPredicted RBP5.7□□□□□ -1.5
PPP4R1-227ENST00000583988 AHI1Q8N157 1196 aa5.7□□□□□ -1.5
PPP4R1-227ENST00000583988 UHMK1Q8TAS1 419 aaKnown RBP5.7□□□□□ -1.5
PPP4R1-227ENST00000583988 ORAI3Q9BRQ5 295 aa5.7□□□□□ -1.5
PPP4R1-227ENST00000583988 NGRNQ9NPE2 291 aaKnown RBP5.7□□□□□ -1.5
PPP4R1-227ENST00000583988 CATSPERZQ9NTU4 200 aa5.7□□□□□ -1.5
PPP4R1-227ENST00000583988 DTLQ9NZJ0 730 aa5.7□□□□□ -1.5
PPP4R1-227ENST00000583988 MYOTQ9UBF9 498 aa5.7□□□□□ -1.5
PPP4R1-227ENST00000583988 ASH2LQ9UBL3 628 aa5.7□□□□□ -1.5
PPP4R1-227ENST00000583988 DSEQ9UL01 958 aa5.7□□□□□ -1.5
PPP4R1-227ENST00000583988 NUB1Q9Y5A7 615 aa5.7□□□□□ -1.5
PPP4R1-227ENST00000583988 TCRBV5S4A2TA0A5A2 114 aa5.69□□□□□ -1.5
PPP4R1-227ENST00000583988 CCDC66A2RUB6 948 aa5.69□□□□□ -1.5
PPP4R1-227ENST00000583988 DNAJC8O75937 253 aaPredicted RBP5.69□□□□□ -1.5
PPP4R1-227ENST00000583988 PYGMP11217 842 aa5.69□□□□□ -1.5
PPP4R1-227ENST00000583988 PDE6AP16499 860 aa5.69□□□□□ -1.5
PPP4R1-227ENST00000583988 SDSP20132 328 aa5.69□□□□□ -1.5
PPP4R1-227ENST00000583988 EPHA5P54756 1037 aa5.69□□□□□ -1.5
PPP4R1-227ENST00000583988 ST5P78524 1137 aa5.69□□□□□ -1.5
PPP4R1-227ENST00000583988 GPR19Q15760 415 aa5.69□□□□□ -1.5
PPP4R1-227ENST00000583988 FAM47CQ5HY64 1035 aa5.69□□□□□ -1.5
PPP4R1-227ENST00000583988 ABHD17CQ6PCB6 329 aa5.69□□□□□ -1.5
PPP4R1-227ENST00000583988 ARHGAP36Q6ZRI8 547 aa5.69□□□□□ -1.5
PPP4R1-227ENST00000583988 SH3RF2Q8TEC5 729 aa5.69□□□□□ -1.5
PPP4R1-227ENST00000583988 CLEC4DQ8WXI8 215 aa5.69□□□□□ -1.5
PPP4R1-227ENST00000583988 CELF4Q9BZC1 486 aaKnown RBP5.69□□□□□ -1.5
PPP4R1-227ENST00000583988 CBLCQ9ULV8 474 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms