RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 HAS3O00219 553 aa28.37■■■□□ 2.13
TSEN54-209ENST00000583454 ST18O60284 1047 aa28.37■■■□□ 2.13
TSEN54-209ENST00000583454 F2P00734 622 aa28.37■■■□□ 2.13
TSEN54-209ENST00000583454 RBL2Q08999 1139 aa28.37■■■□□ 2.13
TSEN54-209ENST00000583454 GNPTABQ3T906 1256 aa28.37■■■□□ 2.13
TSEN54-209ENST00000583454 RETREG2Q8NC44 543 aa28.37■■■□□ 2.13
TSEN54-209ENST00000583454 ANO3Q9BYT9 981 aa28.37■■■□□ 2.13
TSEN54-209ENST00000583454 GTF2IRD1Q9UHL9 959 aa28.37■■■□□ 2.13
TSEN54-209ENST00000583454 SPATA31C2B4DYI2 1134 aa28.36■■■□□ 2.13
TSEN54-209ENST00000583454 DTNBO60941 627 aa28.36■■■□□ 2.13
TSEN54-209ENST00000583454 NLRP5P59047 1200 aa28.36■■■□□ 2.13
TSEN54-209ENST00000583454 LAMC2Q13753 1193 aa28.36■■■□□ 2.13
TSEN54-209ENST00000583454 JAKMIP3Q5VZ66 844 aa28.36■■■□□ 2.13
TSEN54-209ENST00000583454 PPP2R2DQ66LE6 453 aa28.36■■■□□ 2.13
TSEN54-209ENST00000583454 CAGE1Q8TC20 777 aa28.36■■■□□ 2.13
TSEN54-209ENST00000583454 PGBD1Q96JS3 809 aa28.36■■■□□ 2.13
TSEN54-209ENST00000583454 RTEL1Q9NZ71 1219 aa28.36■■■□□ 2.13
TSEN54-209ENST00000583454 HDAC6Q9UBN7 1215 aa28.36■■■□□ 2.13
TSEN54-209ENST00000583454 NOD1Q9Y239 953 aa28.36■■■□□ 2.13
TSEN54-209ENST00000583454 PRRC2BQ5JSZ5 2229 aaKnown RBP28.35■■■□□ 2.13
TSEN54-209ENST00000583454 ZNF286BP0CG31 522 aa28.35■■■□□ 2.13
TSEN54-209ENST00000583454 SREBF1P36956 1147 aa28.35■■■□□ 2.13
TSEN54-209ENST00000583454 PSEN2P49810 448 aa28.35■■■□□ 2.13
TSEN54-209ENST00000583454 SP2Q02086 613 aa28.35■■■□□ 2.13
TSEN54-209ENST00000583454 MYSM1Q5VVJ2 828 aa28.35■■■□□ 2.13
TSEN54-209ENST00000583454 AFAP1L1Q8TED9 768 aa28.35■■■□□ 2.13
TSEN54-209ENST00000583454 CRYGNQ8WXF5 182 aa28.35■■■□□ 2.13
TSEN54-209ENST00000583454 WASF1Q92558 559 aa28.35■■■□□ 2.13
TSEN54-209ENST00000583454 UBIAD1Q9Y5Z9 338 aa28.35■■■□□ 2.13
TSEN54-209ENST00000583454 RBAK-RBAKDNI3L0D1 243 aa28.34■■■□□ 2.13
TSEN54-209ENST00000583454 ACTN1P12814 892 aa28.34■■■□□ 2.13
TSEN54-209ENST00000583454 SEMA3FQ13275 785 aa28.34■■■□□ 2.13
TSEN54-209ENST00000583454 NPY5RQ15761 445 aa28.34■■■□□ 2.13
TSEN54-209ENST00000583454 HSDL1Q3SXM5 330 aa28.34■■■□□ 2.13
TSEN54-209ENST00000583454 GALNT17Q6IS24 598 aa28.34■■■□□ 2.13
TSEN54-209ENST00000583454 DHX37Q8IY37 1157 aaKnown RBP28.34■■■□□ 2.13
TSEN54-209ENST00000583454 DAGLBQ8NCG7 672 aa28.34■■■□□ 2.13
TSEN54-209ENST00000583454 PPM1EQ8WY54 764 aa28.34■■■□□ 2.13
TSEN54-209ENST00000583454 SLC9A7Q96T83 725 aa28.34■■■□□ 2.13
TSEN54-209ENST00000583454 LLPHQ9BRT6 129 aaKnown RBP28.34■■■□□ 2.13
TSEN54-209ENST00000583454 PCDHA4Q9UN74 947 aa28.34■■■□□ 2.13
TSEN54-209ENST00000583454 FIBPO43427 364 aa28.33■■■□□ 2.13
TSEN54-209ENST00000583454 JAK2O60674 1132 aa28.33■■■□□ 2.13
TSEN54-209ENST00000583454 ARHGEF15O94989 841 aa28.33■■■□□ 2.13
TSEN54-209ENST00000583454 CA3P07451 260 aa28.33■■■□□ 2.13
TSEN54-209ENST00000583454 ITGB5P18084 799 aa28.33■■■□□ 2.13
TSEN54-209ENST00000583454 UBA1P22314 1058 aaKnown RBP28.33■■■□□ 2.13
TSEN54-209ENST00000583454 HIC1Q14526 733 aa28.33■■■□□ 2.13
TSEN54-209ENST00000583454 MFSD10Q14728 455 aa28.33■■■□□ 2.13
TSEN54-209ENST00000583454 TRIM71Q2Q1W2 868 aaKnown RBP28.33■■■□□ 2.13
TSEN54-209ENST00000583454 CELF3Q5SZQ8 465 aaKnown RBP28.33■■■□□ 2.13
TSEN54-209ENST00000583454 NLRX1Q86UT6 975 aa28.33■■■□□ 2.13
TSEN54-209ENST00000583454 CCDC83Q8IWF9 413 aa28.33■■■□□ 2.13
TSEN54-209ENST00000583454 PHOSPHO2Q8TCD6 241 aa28.33■■■□□ 2.13
TSEN54-209ENST00000583454 WNT8BQ93098 351 aa28.33■■■□□ 2.13
TSEN54-209ENST00000583454 GPRASP2Q96D09 838 aa28.33■■■□□ 2.13
TSEN54-209ENST00000583454 CD2BP2O95400 341 aaKnown RBP28.32■■■□□ 2.12
TSEN54-209ENST00000583454 KIAA0753Q2KHM9 967 aa28.32■■■□□ 2.12
TSEN54-209ENST00000583454 TRAF7Q6Q0C0 670 aa28.32■■■□□ 2.12
TSEN54-209ENST00000583454 CCDC155Q8N6L0 562 aa28.32■■■□□ 2.12
TSEN54-209ENST00000583454 RASGRP4Q8TDF6 673 aa28.32■■■□□ 2.12
TSEN54-209ENST00000583454 ALG1Q9BT22 464 aa28.32■■■□□ 2.12
TSEN54-209ENST00000583454 PHF20Q9BVI0 1012 aa28.32■■■□□ 2.12
TSEN54-209ENST00000583454 FTOQ9C0B1 505 aaKnown RBP eCLIP28.32■■■□□ 2.12
TSEN54-209ENST00000583454 COL4A4P53420 1690 aaPredicted RBP28.32■■■□□ 2.12
TSEN54-209ENST00000583454 M0R2N6 131 aa28.31■■■□□ 2.12
TSEN54-209ENST00000583454 GGPS1O95749 300 aa28.31■■■□□ 2.12
TSEN54-209ENST00000583454 CYP3A4P08684 503 aa28.31■■■□□ 2.12
TSEN54-209ENST00000583454 SELPP16109 830 aa28.31■■■□□ 2.12
TSEN54-209ENST00000583454 XBP1P17861 261 aa28.31■■■□□ 2.12
TSEN54-209ENST00000583454 IGFBP4P22692 258 aa28.31■■■□□ 2.12
TSEN54-209ENST00000583454 ARHGAP4P98171 946 aa28.31■■■□□ 2.12
TSEN54-209ENST00000583454 TCTN1Q2MV58 587 aa28.31■■■□□ 2.12
TSEN54-209ENST00000583454 TJAP1Q5JTD0 557 aa28.31■■■□□ 2.12
TSEN54-209ENST00000583454 LRRC8DQ7L1W4 858 aa28.31■■■□□ 2.12
TSEN54-209ENST00000583454 HERC6Q8IVU3 1022 aa28.31■■■□□ 2.12
TSEN54-209ENST00000583454 BLIDQ8IZY5 108 aa28.31■■■□□ 2.12
TSEN54-209ENST00000583454 CDHR1Q96JP9 859 aa28.31■■■□□ 2.12
TSEN54-209ENST00000583454 SENP7Q9BQF6 1050 aa28.31■■■□□ 2.12
TSEN54-209ENST00000583454 KATNAL1Q9BW62 490 aa28.31■■■□□ 2.12
TSEN54-209ENST00000583454 BCAS3Q9H6U6 928 aa28.31■■■□□ 2.12
TSEN54-209ENST00000583454 JADE2Q9NQC1 790 aa28.31■■■□□ 2.12
TSEN54-209ENST00000583454 KCNJ14Q9UNX9 436 aa28.31■■■□□ 2.12
TSEN54-209ENST00000583454 MAFGO15525 162 aa28.3■■■□□ 2.12
TSEN54-209ENST00000583454 SORBS3O60504 671 aa28.3■■■□□ 2.12
TSEN54-209ENST00000583454 NBNO60934 754 aa28.3■■■□□ 2.12
TSEN54-209ENST00000583454 PPFIA4O75335 1185 aa28.3■■■□□ 2.12
TSEN54-209ENST00000583454 BAIAP3O94812 1187 aa28.3■■■□□ 2.12
TSEN54-209ENST00000583454 CXCL10P02778 98 aa28.3■■■□□ 2.12
TSEN54-209ENST00000583454 CKBP12277 381 aa28.3■■■□□ 2.12
TSEN54-209ENST00000583454 MCM2P49736 904 aa28.3■■■□□ 2.12
TSEN54-209ENST00000583454 C7orf31Q8N865 590 aa28.3■■■□□ 2.12
TSEN54-209ENST00000583454 MXRA8Q9BRK3 442 aa28.3■■■□□ 2.12
TSEN54-209ENST00000583454 C16orf70Q9BSU1 422 aa28.3■■■□□ 2.12
TSEN54-209ENST00000583454 GJB4Q9NTQ9 266 aa28.3■■■□□ 2.12
TSEN54-209ENST00000583454 EPOPA6NHQ4 379 aa28.29■■■□□ 2.12
TSEN54-209ENST00000583454 ZNF200P98182 395 aaPredicted RBP28.29■■■□□ 2.12
TSEN54-209ENST00000583454 CCDC85BQ15834 202 aaPredicted RBP28.29■■■□□ 2.12
TSEN54-209ENST00000583454 CEP55Q53EZ4 464 aa28.29■■■□□ 2.12
TSEN54-209ENST00000583454 SPATA33Q96N06 139 aa28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms