RNA–Protein interactions for RNA: ENST00000583438.1

PPP4R1-225, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-225ENST00000583438 BTLAQ7Z6A9 289 aa9.43□□□□□ -0.9
PPP4R1-225ENST00000583438 ATCAYQ86WG3 371 aa9.43□□□□□ -0.9
PPP4R1-225ENST00000583438 OTUD7AQ8TE49 926 aaPredicted RBP9.43□□□□□ -0.9
PPP4R1-225ENST00000583438 CEP95Q96GE4 821 aa9.43□□□□□ -0.9
PPP4R1-225ENST00000583438 SEC62Q99442 399 aaKnown RBP9.43□□□□□ -0.9
PPP4R1-225ENST00000583438 SLF1Q9BQI6 1058 aa9.43□□□□□ -0.9
PPP4R1-225ENST00000583438 ZCCHC2Q9C0B9 1178 aaKnown RBP9.43□□□□□ -0.9
PPP4R1-225ENST00000583438 ZNF576Q9H609 170 aa9.43□□□□□ -0.9
PPP4R1-225ENST00000583438 RAVER2Q9HCJ3 691 aaKnown RBP9.43□□□□□ -0.9
PPP4R1-225ENST00000583438 INCENPQ9NQS7 918 aa9.43□□□□□ -0.9
PPP4R1-225ENST00000583438 TMEM39AQ9NV64 488 aa9.43□□□□□ -0.9
PPP4R1-225ENST00000583438 NXF1Q9UBU9 619 aaKnown RBP9.43□□□□□ -0.9
PPP4R1-225ENST00000583438 NRBP1Q9UHY1 535 aa9.43□□□□□ -0.9
PPP4R1-225ENST00000583438 ZHX1Q9UKY1 873 aaPredicted RBP9.43□□□□□ -0.9
PPP4R1-225ENST00000583438 DIS3Q9Y2L1 958 aaKnown RBP9.43□□□□□ -0.9
PPP4R1-225ENST00000583438 PLIN4Q96Q06 1357 aa9.42□□□□□ -0.9
PPP4R1-225ENST00000583438 SYNGAP1Q96PV0 1343 aa9.42□□□□□ -0.9
PPP4R1-225ENST00000583438 F5H6K3 240 aa9.42□□□□□ -0.9
PPP4R1-225ENST00000583438 TIMP1P01033 207 aa9.42□□□□□ -0.9
PPP4R1-225ENST00000583438 ASGR1P07306 291 aa9.42□□□□□ -0.9
PPP4R1-225ENST00000583438 IFIT2P09913 472 aaKnown RBP9.42□□□□□ -0.9
PPP4R1-225ENST00000583438 MYOGP15173 224 aa9.42□□□□□ -0.9
PPP4R1-225ENST00000583438 EIF1AXP47813 144 aaKnown RBP9.42□□□□□ -0.9
PPP4R1-225ENST00000583438 KLRC3Q07444 240 aa9.42□□□□□ -0.9
PPP4R1-225ENST00000583438 KCTD2Q14681 263 aa9.42□□□□□ -0.9
PPP4R1-225ENST00000583438 CCDC144BQ3MJ40 725 aa9.42□□□□□ -0.9
PPP4R1-225ENST00000583438 IER5Q5VY09 327 aa9.42□□□□□ -0.9
PPP4R1-225ENST00000583438 ZNF365Q70YC5 407 aa9.42□□□□□ -0.9
PPP4R1-225ENST00000583438 RNF180Q86T96 592 aa9.42□□□□□ -0.9
PPP4R1-225ENST00000583438 CPXCR1Q8N123 301 aa9.42□□□□□ -0.9
PPP4R1-225ENST00000583438 CLASRPQ8N2M8 674 aaKnown RBP9.42□□□□□ -0.9
PPP4R1-225ENST00000583438 CCDC17Q96LX7 622 aa9.42□□□□□ -0.9
PPP4R1-225ENST00000583438 NECAB3Q96P71 396 aaPredicted RBP9.42□□□□□ -0.9
PPP4R1-225ENST00000583438 TEX13BQ9BXU2 312 aa9.42□□□□□ -0.9
PPP4R1-225ENST00000583438 WNT8AQ9H1J5 351 aa9.42□□□□□ -0.9
PPP4R1-225ENST00000583438 PRDM12Q9H4Q4 367 aa9.42□□□□□ -0.9
PPP4R1-225ENST00000583438 KANSL2Q9H9L4 492 aa9.42□□□□□ -0.9
PPP4R1-225ENST00000583438 SLC38A10Q9HBR0 1119 aa9.42□□□□□ -0.9
PPP4R1-225ENST00000583438 STARD7Q9NQZ5 370 aa9.42□□□□□ -0.9
PPP4R1-225ENST00000583438 MYH7BA7E2Y1 1941 aa9.42□□□□□ -0.9
PPP4R1-225ENST00000583438 DOCK5Q9H7D0 1870 aa9.42□□□□□ -0.9
PPP4R1-225ENST00000583438 EPOPA6NHQ4 379 aa9.41□□□□□ -0.9
PPP4R1-225ENST00000583438 OPLAHO14841 1288 aa9.41□□□□□ -0.9
PPP4R1-225ENST00000583438 ATP2A1O14983 1001 aa9.41□□□□□ -0.9
PPP4R1-225ENST00000583438 DUSP11O75319 330 aaKnown RBP9.41□□□□□ -0.9
PPP4R1-225ENST00000583438 C6orf222P0C671 652 aaPredicted RBP9.41□□□□□ -0.9
PPP4R1-225ENST00000583438 IDH3AP50213 366 aa9.41□□□□□ -0.9
PPP4R1-225ENST00000583438 RABGGTBP53611 331 aa9.41□□□□□ -0.9
PPP4R1-225ENST00000583438 GJA9P57773 515 aa9.41□□□□□ -0.9
PPP4R1-225ENST00000583438 NKX3-2P78367 333 aa9.41□□□□□ -0.9
PPP4R1-225ENST00000583438 ACVR2BQ13705 512 aa9.41□□□□□ -0.9
PPP4R1-225ENST00000583438 SBK1Q52WX2 424 aa9.41□□□□□ -0.9
PPP4R1-225ENST00000583438 SAMD5Q5TGI4 173 aa9.41□□□□□ -0.9
PPP4R1-225ENST00000583438 MFSD5Q6N075 450 aa9.41□□□□□ -0.9
PPP4R1-225ENST00000583438 ARMCX2Q7L311 632 aa9.41□□□□□ -0.9
PPP4R1-225ENST00000583438 CCDC144CPQ8IYA2 1237 aa9.41□□□□□ -0.9
PPP4R1-225ENST00000583438 VWA5B2Q8N398 1253 aa9.41□□□□□ -0.9
PPP4R1-225ENST00000583438 FAM133AQ8N9E0 248 aa9.41□□□□□ -0.9
PPP4R1-225ENST00000583438 SLC43A3Q8NBI5 491 aa9.41□□□□□ -0.9
PPP4R1-225ENST00000583438 GTPBP3Q969Y2 492 aaKnown RBP9.41□□□□□ -0.9
PPP4R1-225ENST00000583438 TIFAQ96CG3 184 aa9.41□□□□□ -0.9
PPP4R1-225ENST00000583438 TOX2Q96NM4 488 aa9.41□□□□□ -0.9
PPP4R1-225ENST00000583438 PDGFCQ9NRA1 345 aa9.41□□□□□ -0.9
PPP4R1-225ENST00000583438 NYAP2Q9P242 653 aa9.41□□□□□ -0.9
PPP4R1-225ENST00000583438 SIP14410 1827 aa9.4□□□□□ -0.9
PPP4R1-225ENST00000583438 TMEM265A0A087WTH1 108 aa9.4□□□□□ -0.9
PPP4R1-225ENST00000583438 CDC14CA4D256 554 aa9.4□□□□□ -0.9
PPP4R1-225ENST00000583438 MINDY4BA8MYZ0 360 aa9.4□□□□□ -0.9
PPP4R1-225ENST00000583438 ATXN7O15265 892 aaPredicted RBP9.4□□□□□ -0.9
PPP4R1-225ENST00000583438 NMT2O60551 498 aa9.4□□□□□ -0.9
PPP4R1-225ENST00000583438 PSMC6P62333 389 aa9.4□□□□□ -0.9
PPP4R1-225ENST00000583438 TYRO3Q06418 890 aa9.4□□□□□ -0.9
PPP4R1-225ENST00000583438 MUM1L1Q5H9M0 696 aa9.4□□□□□ -0.9
PPP4R1-225ENST00000583438 KRT40Q6A162 431 aa9.4□□□□□ -0.9
PPP4R1-225ENST00000583438 CXCL17Q6UXB2 119 aa9.4□□□□□ -0.9
PPP4R1-225ENST00000583438 PPM1EQ8WY54 764 aa9.4□□□□□ -0.9
PPP4R1-225ENST00000583438 GMCL1Q96IK5 515 aa9.4□□□□□ -0.9
PPP4R1-225ENST00000583438 CEP63Q96MT8 703 aa9.4□□□□□ -0.9
PPP4R1-225ENST00000583438 NKX2-4Q9H2Z4 354 aa9.4□□□□□ -0.9
PPP4R1-225ENST00000583438 A1CFQ9NQ94 594 aaKnown RBP9.4□□□□□ -0.9
PPP4R1-225ENST00000583438 HOMER2Q9NSB8 354 aa9.4□□□□□ -0.9
PPP4R1-225ENST00000583438 ARPP21Q9UBL0 812 aaPredicted RBP9.4□□□□□ -0.9
PPP4R1-225ENST00000583438 CLIP2Q9UDT6 1046 aa9.4□□□□□ -0.9
PPP4R1-225ENST00000583438 HCN2Q9UL51 889 aa9.4□□□□□ -0.9
PPP4R1-225ENST00000583438 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.39□□□□□ -0.91
PPP4R1-225ENST00000583438 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.39□□□□□ -0.91
PPP4R1-225ENST00000583438 ARVCFO00192 962 aa9.39□□□□□ -0.91
PPP4R1-225ENST00000583438 GPAA1O43292 621 aa9.39□□□□□ -0.91
PPP4R1-225ENST00000583438 BNIP3LO60238 219 aa9.39□□□□□ -0.91
PPP4R1-225ENST00000583438 B4GALT4O60513 344 aa9.39□□□□□ -0.91
PPP4R1-225ENST00000583438 GRNP28799 593 aaKnown RBP9.39□□□□□ -0.91
PPP4R1-225ENST00000583438 TAPT1Q6NXT6 567 aa9.39□□□□□ -0.91
PPP4R1-225ENST00000583438 FIGNL1Q6PIW4 674 aa9.39□□□□□ -0.91
PPP4R1-225ENST00000583438 CCDC129Q6ZRS4 1044 aa9.39□□□□□ -0.91
PPP4R1-225ENST00000583438 FBXO16Q8IX29 292 aaPredicted RBP9.39□□□□□ -0.91
PPP4R1-225ENST00000583438 RPAP2Q8IXW5 612 aaPredicted RBP9.39□□□□□ -0.91
PPP4R1-225ENST00000583438 KBTBD3Q8NAB2 608 aa9.39□□□□□ -0.91
PPP4R1-225ENST00000583438 NANOS1Q8WY41 292 aaKnown RBP9.39□□□□□ -0.91
PPP4R1-225ENST00000583438 MKL1Q969V6 931 aa9.39□□□□□ -0.91
PPP4R1-225ENST00000583438 TRPV6Q9H1D0 765 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms