RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 GHRP10912 638 aa14.79□□□□□ -0.04
SS18-219ENST00000581570 ARHGAP4P98171 946 aa14.79□□□□□ -0.04
SS18-219ENST00000581570 CAMK1Q14012 370 aa14.79□□□□□ -0.04
SS18-219ENST00000581570 ZNF318Q5VUA4 2279 aa14.79□□□□□ -0.04
SS18-219ENST00000581570 TICAM2Q86XR7 235 aa14.79□□□□□ -0.04
SS18-219ENST00000581570 FBXL6Q8N531 539 aa14.79□□□□□ -0.04
SS18-219ENST00000581570 ZSCAN10Q96SZ4 725 aaPredicted RBP14.79□□□□□ -0.04
SS18-219ENST00000581570 RC3H2Q9HBD1 1191 aaKnown RBP14.79□□□□□ -0.04
SS18-219ENST00000581570 PLAGL2Q9UPG8 496 aa14.79□□□□□ -0.04
SS18-219ENST00000581570 PCDHA1Q9Y5I3 950 aa14.79□□□□□ -0.04
SS18-219ENST00000581570 LOC730098B7Z3J9 87 aa14.78□□□□□ -0.04
SS18-219ENST00000581570 GCOM1H8Y6P7 765 aaPredicted RBP14.78□□□□□ -0.04
SS18-219ENST00000581570 GFRA3O60609 400 aa14.78□□□□□ -0.04
SS18-219ENST00000581570 PPP1R11O60927 126 aaPredicted RBP14.78□□□□□ -0.04
SS18-219ENST00000581570 POLR2MP0CAP2 368 aa14.78□□□□□ -0.04
SS18-219ENST00000581570 PDE1AP54750 535 aa14.78□□□□□ -0.04
SS18-219ENST00000581570 RRP1P56182 461 aaKnown RBP14.78□□□□□ -0.04
SS18-219ENST00000581570 ADAM17P78536 824 aa14.78□□□□□ -0.04
SS18-219ENST00000581570 NEDD9Q14511 834 aa14.78□□□□□ -0.04
SS18-219ENST00000581570 UTP14CQ5TAP6 766 aaKnown RBP14.78□□□□□ -0.04
SS18-219ENST00000581570 ANKRD45Q5TZF3 282 aa14.78□□□□□ -0.04
SS18-219ENST00000581570 CYFIP1Q7L576 1253 aa14.78□□□□□ -0.04
SS18-219ENST00000581570 FCHSD1Q86WN1 690 aa14.78□□□□□ -0.04
SS18-219ENST00000581570 STAG2Q8N3U4 1231 aa14.78□□□□□ -0.04
SS18-219ENST00000581570 ENAHQ8N8S7 591 aaPredicted RBP14.78□□□□□ -0.04
SS18-219ENST00000581570 ZNF689Q96CS4 500 aaPredicted RBP14.78□□□□□ -0.04
SS18-219ENST00000581570 GPR20Q99678 358 aa14.78□□□□□ -0.04
SS18-219ENST00000581570 CLEC1BQ9P126 229 aa14.78□□□□□ -0.04
SS18-219ENST00000581570 ZNF215Q9UL58 517 aaPredicted RBP14.78□□□□□ -0.04
SS18-219ENST00000581570 B4E1Z4 1266 aa14.77□□□□□ -0.05
SS18-219ENST00000581570 ZBTB5O15062 677 aa14.77□□□□□ -0.05
SS18-219ENST00000581570 MFAP1P55081 439 aaKnown RBP14.77□□□□□ -0.05
SS18-219ENST00000581570 GNPTABQ3T906 1256 aa14.77□□□□□ -0.05
SS18-219ENST00000581570 METTL7BQ6UX53 244 aa14.77□□□□□ -0.05
SS18-219ENST00000581570 ADGRD2Q7Z7M1 963 aa14.77□□□□□ -0.05
SS18-219ENST00000581570 TRIM50Q86XT4 487 aa14.77□□□□□ -0.05
SS18-219ENST00000581570 EFHBQ8N7U6 833 aa14.77□□□□□ -0.05
SS18-219ENST00000581570 SMRP1Q8NCR6 262 aa14.77□□□□□ -0.05
SS18-219ENST00000581570 LMBR1Q8WVP7 490 aa14.77□□□□□ -0.05
SS18-219ENST00000581570 P2RX5Q93086 422 aa14.77□□□□□ -0.05
SS18-219ENST00000581570 MTMR8Q96EF0 704 aa14.77□□□□□ -0.05
SS18-219ENST00000581570 EHMT1Q9H9B1 1298 aa14.77□□□□□ -0.05
SS18-219ENST00000581570 FAM86C1Q9NVL1 165 aa14.77□□□□□ -0.05
SS18-219ENST00000581570 ZSWIM5Q9P217 1185 aa14.77□□□□□ -0.05
SS18-219ENST00000581570 SUPT16HQ9Y5B9 1047 aaKnown RBP14.77□□□□□ -0.05
SS18-219ENST00000581570 MYO7AQ13402 2215 aa14.77□□□□□ -0.05
SS18-219ENST00000581570 TECTAO75443 2155 aa14.77□□□□□ -0.05
SS18-219ENST00000581570 MYH7BA7E2Y1 1941 aa14.76□□□□□ -0.05
SS18-219ENST00000581570 NRCAMQ92823 1304 aa14.76□□□□□ -0.05
SS18-219ENST00000581570 KLRF2D3W0D1 207 aa14.76□□□□□ -0.05
SS18-219ENST00000581570 DGKIO75912 1065 aa14.76□□□□□ -0.05
SS18-219ENST00000581570 DNAJB1P25685 340 aa14.76□□□□□ -0.05
SS18-219ENST00000581570 ICAM3P32942 547 aa14.76□□□□□ -0.05
SS18-219ENST00000581570 COASYQ13057 564 aa14.76□□□□□ -0.05
SS18-219ENST00000581570 LPIN1Q14693 890 aa14.76□□□□□ -0.05
SS18-219ENST00000581570 CBX2Q14781 532 aaPredicted RBP14.76□□□□□ -0.05
SS18-219ENST00000581570 NAALADL2Q58DX5 795 aa14.76□□□□□ -0.05
SS18-219ENST00000581570 SPPL3Q8TCT6 385 aa14.76□□□□□ -0.05
SS18-219ENST00000581570 IRF2BPLQ9H1B7 796 aa14.76□□□□□ -0.05
SS18-219ENST00000581570 MRPL42Q9Y6G3 142 aaKnown RBP14.76□□□□□ -0.05
SS18-219ENST00000581570 RALGAPA2Q2PPJ7 1873 aa14.76□□□□□ -0.05
SS18-219ENST00000581570 SPATA31C2B4DYI2 1134 aa14.75□□□□□ -0.05
SS18-219ENST00000581570 STAM2O75886 525 aa14.75□□□□□ -0.05
SS18-219ENST00000581570 ITGB1P05556 798 aa14.75□□□□□ -0.05
SS18-219ENST00000581570 NRIP1P48552 1158 aa14.75□□□□□ -0.05
SS18-219ENST00000581570 MRPS9P82933 396 aaKnown RBP14.75□□□□□ -0.05
SS18-219ENST00000581570 SIGLEC14Q08ET2 396 aa14.75□□□□□ -0.05
SS18-219ENST00000581570 MGAT3Q09327 533 aa14.75□□□□□ -0.05
SS18-219ENST00000581570 TRAF1Q13077 416 aa14.75□□□□□ -0.05
SS18-219ENST00000581570 TAF2Q6P1X5 1199 aa14.75□□□□□ -0.05
SS18-219ENST00000581570 RUFY4Q6ZNE9 571 aa14.75□□□□□ -0.05
SS18-219ENST00000581570 RBM23Q86U06 439 aaKnown RBP14.75□□□□□ -0.05
SS18-219ENST00000581570 RSPH3Q86UC2 560 aa14.75□□□□□ -0.05
SS18-219ENST00000581570 POF1BQ8WVV4 589 aa14.75□□□□□ -0.05
SS18-219ENST00000581570 ATOH1Q92858 354 aaPredicted RBP14.75□□□□□ -0.05
SS18-219ENST00000581570 RILPL2Q969X0 211 aa14.75□□□□□ -0.05
SS18-219ENST00000581570 INPP4AQ96PE3 977 aaPredicted RBP14.75□□□□□ -0.05
SS18-219ENST00000581570 PHF7Q9BWX1 381 aaPredicted RBP14.75□□□□□ -0.05
SS18-219ENST00000581570 RTEL1Q9NZ71 1219 aa14.75□□□□□ -0.05
SS18-219ENST00000581570 USP15Q9Y4E8 981 aaPredicted RBP14.75□□□□□ -0.05
SS18-219ENST00000581570 NLRC5Q86WI3 1866 aa14.75□□□□□ -0.05
SS18-219ENST00000581570 C5orf42Q9H799 3197 aa14.74□□□□□ -0.05
SS18-219ENST00000581570 FIBPO43427 364 aa14.74□□□□□ -0.05
SS18-219ENST00000581570 AVPR2P30518 371 aa14.74□□□□□ -0.05
SS18-219ENST00000581570 VCPP55072 806 aaKnown RBP14.74□□□□□ -0.05
SS18-219ENST00000581570 SP4Q02446 784 aa14.74□□□□□ -0.05
SS18-219ENST00000581570 SEMA3FQ13275 785 aa14.74□□□□□ -0.05
SS18-219ENST00000581570 FBXO47Q5MNV8 452 aa14.74□□□□□ -0.05
SS18-219ENST00000581570 IFIT1BQ5T764 474 aaKnown RBP14.74□□□□□ -0.05
SS18-219ENST00000581570 HOMER1Q86YM7 354 aa14.74□□□□□ -0.05
SS18-219ENST00000581570 CMTR2Q8IYT2 770 aaKnown RBP14.74□□□□□ -0.05
SS18-219ENST00000581570 KLHL23Q8NBE8 558 aa14.74□□□□□ -0.05
SS18-219ENST00000581570 RPGRIP1Q96KN7 1286 aa14.74□□□□□ -0.05
SS18-219ENST00000581570 UBAC1Q9BSL1 405 aa14.74□□□□□ -0.05
SS18-219ENST00000581570 BARX2Q9UMQ3 279 aaPredicted RBP14.74□□□□□ -0.05
SS18-219ENST00000581570 TELO2Q9Y4R8 837 aa14.74□□□□□ -0.05
SS18-219ENST00000581570 SDSP20132 328 aa14.73□□□□□ -0.05
SS18-219ENST00000581570 FOXK2Q01167 660 aa14.73□□□□□ -0.05
SS18-219ENST00000581570 TSHZ1Q6ZSZ6 1077 aa14.73□□□□□ -0.05
SS18-219ENST00000581570 ASIC4Q96FT7 647 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms