RNA–Protein interactions for RNA: ENST00000581039.1

RFFL-208, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 424 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-208ENST00000581039 MAD2L2Q9UI95 211 aa11.49□□□□□ -0.57
RFFL-208ENST00000581039 CD207Q9UJ71 328 aa11.49□□□□□ -0.57
RFFL-208ENST00000581039 NRCAMQ92823 1304 aa11.49□□□□□ -0.57
RFFL-208ENST00000581039 MYO7AQ13402 2215 aa11.48□□□□□ -0.57
RFFL-208ENST00000581039 HIP1O00291 1037 aa11.48□□□□□ -0.57
RFFL-208ENST00000581039 FIBPO43427 364 aa11.48□□□□□ -0.57
RFFL-208ENST00000581039 GHRP10912 638 aa11.48□□□□□ -0.57
RFFL-208ENST00000581039 ADAM17P78536 824 aa11.48□□□□□ -0.57
RFFL-208ENST00000581039 MRPS9P82933 396 aaKnown RBP11.48□□□□□ -0.57
RFFL-208ENST00000581039 ADAM15Q13444 863 aa11.48□□□□□ -0.57
RFFL-208ENST00000581039 TAF2Q6P1X5 1199 aa11.48□□□□□ -0.57
RFFL-208ENST00000581039 TRIM50Q86XT4 487 aa11.48□□□□□ -0.57
RFFL-208ENST00000581039 EDAQ92838 391 aa11.48□□□□□ -0.57
RFFL-208ENST00000581039 CLP1Q92989 425 aaKnown RBP11.48□□□□□ -0.57
RFFL-208ENST00000581039 PPP2R3CQ969Q6 453 aa11.48□□□□□ -0.57
RFFL-208ENST00000581039 INPP4AQ96PE3 977 aaPredicted RBP11.48□□□□□ -0.57
RFFL-208ENST00000581039 DSCC1Q9BVC3 393 aa11.48□□□□□ -0.57
RFFL-208ENST00000581039 PLVAPQ9BX97 442 aa11.48□□□□□ -0.57
RFFL-208ENST00000581039 EHMT1Q9H9B1 1298 aa11.48□□□□□ -0.57
RFFL-208ENST00000581039 ADGRA3Q8IWK6 1321 aa11.48□□□□□ -0.57
RFFL-208ENST00000581039 COL4A6Q14031 1691 aa11.47□□□□□ -0.57
RFFL-208ENST00000581039 PNMA6FA0A0J9YX94 578 aa11.47□□□□□ -0.57
RFFL-208ENST00000581039 CSPG5O95196 566 aa11.47□□□□□ -0.57
RFFL-208ENST00000581039 MMP1P03956 469 aa11.47□□□□□ -0.57
RFFL-208ENST00000581039 LINC00271P0C7V0 271 aa11.47□□□□□ -0.57
RFFL-208ENST00000581039 GTF2F1P35269 517 aaKnown RBP eCLIP11.47□□□□□ -0.57
RFFL-208ENST00000581039 NDUFV1P49821 464 aa11.47□□□□□ -0.57
RFFL-208ENST00000581039 SP4Q02446 784 aa11.47□□□□□ -0.57
RFFL-208ENST00000581039 SEC23AQ15436 765 aa11.47□□□□□ -0.57
RFFL-208ENST00000581039 PKN1Q16512 942 aa11.47□□□□□ -0.57
RFFL-208ENST00000581039 B4GALNT3Q6L9W6 998 aa11.47□□□□□ -0.57
RFFL-208ENST00000581039 GIMAP8Q8ND71 665 aaPredicted RBP11.47□□□□□ -0.57
RFFL-208ENST00000581039 PBXIP1Q96AQ6 731 aa11.47□□□□□ -0.57
RFFL-208ENST00000581039 RIOX1Q9H6W3 641 aa11.47□□□□□ -0.57
RFFL-208ENST00000581039 ALG13Q9NP73 1137 aaKnown RBP11.47□□□□□ -0.57
RFFL-208ENST00000581039 PLAGL2Q9UPG8 496 aa11.47□□□□□ -0.57
RFFL-208ENST00000581039 LINC01565O15544 149 aa11.46□□□□□ -0.57
RFFL-208ENST00000581039 TBX10O75333 385 aa11.46□□□□□ -0.57
RFFL-208ENST00000581039 DGKIO75912 1065 aa11.46□□□□□ -0.57
RFFL-208ENST00000581039 TRDNQ13061 729 aa11.46□□□□□ -0.57
RFFL-208ENST00000581039 SEMA3FQ13275 785 aa11.46□□□□□ -0.57
RFFL-208ENST00000581039 LPIN1Q14693 890 aa11.46□□□□□ -0.57
RFFL-208ENST00000581039 GRM4Q14833 912 aa11.46□□□□□ -0.57
RFFL-208ENST00000581039 NAALADL2Q58DX5 795 aa11.46□□□□□ -0.57
RFFL-208ENST00000581039 RUFY4Q6ZNE9 571 aa11.46□□□□□ -0.57
RFFL-208ENST00000581039 BMP8AQ7Z5Y6 402 aa11.46□□□□□ -0.57
RFFL-208ENST00000581039 NLRX1Q86UT6 975 aa11.46□□□□□ -0.57
RFFL-208ENST00000581039 SMARCC2Q8TAQ2 1214 aa11.46□□□□□ -0.57
RFFL-208ENST00000581039 P2RX5Q93086 422 aa11.46□□□□□ -0.57
RFFL-208ENST00000581039 ZNF689Q96CS4 500 aaPredicted RBP11.46□□□□□ -0.57
RFFL-208ENST00000581039 PRRX2Q99811 253 aa11.46□□□□□ -0.57
RFFL-208ENST00000581039 SENP7Q9BQF6 1050 aa11.46□□□□□ -0.57
RFFL-208ENST00000581039 RC3H2Q9HBD1 1191 aaKnown RBP11.46□□□□□ -0.57
RFFL-208ENST00000581039 TELO2Q9Y4R8 837 aa11.46□□□□□ -0.57
RFFL-208ENST00000581039 SUPT16HQ9Y5B9 1047 aaKnown RBP11.46□□□□□ -0.57
RFFL-208ENST00000581039 MYH6P13533 1939 aa11.46□□□□□ -0.58
RFFL-208ENST00000581039 ERICH2A1L162 156 aa11.45□□□□□ -0.58
RFFL-208ENST00000581039 TMEM221A6NGB7 291 aa11.45□□□□□ -0.58
RFFL-208ENST00000581039 M0R296 226 aa11.45□□□□□ -0.58
RFFL-208ENST00000581039 EYA4O95677 639 aa11.45□□□□□ -0.58
RFFL-208ENST00000581039 TCF7P36402 384 aaPredicted RBP11.45□□□□□ -0.58
RFFL-208ENST00000581039 PTPN5P54829 565 aa11.45□□□□□ -0.58
RFFL-208ENST00000581039 PPFIA1Q13136 1202 aa11.45□□□□□ -0.58
RFFL-208ENST00000581039 CAMK1Q14012 370 aa11.45□□□□□ -0.58
RFFL-208ENST00000581039 SLC35G1Q2M3R5 365 aa11.45□□□□□ -0.58
RFFL-208ENST00000581039 PCNX4Q63HM2 1172 aa11.45□□□□□ -0.58
RFFL-208ENST00000581039 XRRA1Q6P2D8 792 aa11.45□□□□□ -0.58
RFFL-208ENST00000581039 TRIM67Q6ZTA4 783 aa11.45□□□□□ -0.58
RFFL-208ENST00000581039 CYB5R4Q7L1T6 521 aa11.45□□□□□ -0.58
RFFL-208ENST00000581039 PLEKHM2Q8IWE5 1019 aa11.45□□□□□ -0.58
RFFL-208ENST00000581039 SUGP1Q8IWZ8 645 aaKnown RBP11.45□□□□□ -0.58
RFFL-208ENST00000581039 DNAJB3Q8WWF6 145 aa11.45□□□□□ -0.58
RFFL-208ENST00000581039 PIBF1Q8WXW3 757 aa11.45□□□□□ -0.58
RFFL-208ENST00000581039 CUL5Q93034 780 aa11.45□□□□□ -0.58
RFFL-208ENST00000581039 OSBPL3Q9H4L5 887 aa11.45□□□□□ -0.58
RFFL-208ENST00000581039 FRMPD4Q14CM0 1322 aa11.44□□□□□ -0.58
RFFL-208ENST00000581039 IFIT3O14879 490 aaKnown RBP11.44□□□□□ -0.58
RFFL-208ENST00000581039 CYTH3O43739 400 aa11.44□□□□□ -0.58
RFFL-208ENST00000581039 ITGB1P05556 798 aa11.44□□□□□ -0.58
RFFL-208ENST00000581039 RRP1P56182 461 aaKnown RBP11.44□□□□□ -0.58
RFFL-208ENST00000581039 MGAT3Q09327 533 aa11.44□□□□□ -0.58
RFFL-208ENST00000581039 COASYQ13057 564 aa11.44□□□□□ -0.58
RFFL-208ENST00000581039 GRIK4Q16099 956 aa11.44□□□□□ -0.58
RFFL-208ENST00000581039 FBXO47Q5MNV8 452 aa11.44□□□□□ -0.58
RFFL-208ENST00000581039 IER5LQ5T953 404 aa11.44□□□□□ -0.58
RFFL-208ENST00000581039 IER5Q5VY09 327 aa11.44□□□□□ -0.58
RFFL-208ENST00000581039 TSHZ1Q6ZSZ6 1077 aa11.44□□□□□ -0.58
RFFL-208ENST00000581039 CHD1LQ86WJ1 897 aa11.44□□□□□ -0.58
RFFL-208ENST00000581039 CMTR2Q8IYT2 770 aaKnown RBP11.44□□□□□ -0.58
RFFL-208ENST00000581039 EFHBQ8N7U6 833 aa11.44□□□□□ -0.58
RFFL-208ENST00000581039 KLHL23Q8NBE8 558 aa11.44□□□□□ -0.58
RFFL-208ENST00000581039 SPPL3Q8TCT6 385 aa11.44□□□□□ -0.58
RFFL-208ENST00000581039 SEPT1Q8WYJ6 367 aa11.44□□□□□ -0.58
RFFL-208ENST00000581039 GLG1Q92896 1179 aa11.44□□□□□ -0.58
RFFL-208ENST00000581039 MSLNLQ96KJ4 702 aa11.44□□□□□ -0.58
RFFL-208ENST00000581039 PHOX2BQ99453 314 aa11.44□□□□□ -0.58
RFFL-208ENST00000581039 FTHL17Q9BXU8 183 aa11.44□□□□□ -0.58
RFFL-208ENST00000581039 RWDD1Q9H446 243 aaPredicted RBP11.44□□□□□ -0.58
RFFL-208ENST00000581039 ERAP1Q9NZ08 941 aa11.44□□□□□ -0.58
RFFL-208ENST00000581039 CLEC1BQ9P126 229 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms