RNA–Protein interactions for RNA: ENST00000580798.1

SMG8-205, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG8, Length 583 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-205ENST00000580798 TMEFF2Q9UIK5 374 aaPredicted RBP5.32□□□□□ -1.56
SMG8-205ENST00000580798 FBXL7Q9UJT9 491 aa5.32□□□□□ -1.56
SMG8-205ENST00000580798 PCDHB4Q9Y5E5 795 aa5.32□□□□□ -1.56
SMG8-205ENST00000580798 TNFRSF18Q9Y5U5 241 aa5.32□□□□□ -1.56
SMG8-205ENST00000580798 SLC4A7Q9Y6M7 1214 aa5.32□□□□□ -1.56
SMG8-205ENST00000580798 ARNTLO00327 626 aa5.31□□□□□ -1.56
SMG8-205ENST00000580798 SMAD7O15105 426 aaKnown RBP5.31□□□□□ -1.56
SMG8-205ENST00000580798 TADA3O75528 432 aa5.31□□□□□ -1.56
SMG8-205ENST00000580798 HNRNPA0Q13151 305 aaKnown RBP5.31□□□□□ -1.56
SMG8-205ENST00000580798 C6orf15Q6UXA7 325 aaPredicted RBP5.31□□□□□ -1.56
SMG8-205ENST00000580798 EDAQ92838 391 aa5.31□□□□□ -1.56
SMG8-205ENST00000580798 TMEM169Q96HH4 297 aa5.31□□□□□ -1.56
SMG8-205ENST00000580798 LRRC37BQ96QE4 947 aa5.31□□□□□ -1.56
SMG8-205ENST00000580798 WDR26Q9H7D7 661 aa5.31□□□□□ -1.56
SMG8-205ENST00000580798 RIPOR2Q9Y4F9 1068 aa5.31□□□□□ -1.56
SMG8-205ENST00000580798 A0A087X1B8 175 aa5.3□□□□□ -1.56
SMG8-205ENST00000580798 LOC102724159A0A0B4J2E5 919 aa5.3□□□□□ -1.56
SMG8-205ENST00000580798 ANKRD62A6NC57 917 aa5.3□□□□□ -1.56
SMG8-205ENST00000580798 ITGAVP06756 1048 aa5.3□□□□□ -1.56
SMG8-205ENST00000580798 ECI1P42126 302 aa5.3□□□□□ -1.56
SMG8-205ENST00000580798 GTF2A2P52657 109 aa5.3□□□□□ -1.56
SMG8-205ENST00000580798 INHBCP55103 352 aa5.3□□□□□ -1.56
SMG8-205ENST00000580798 PWP2Q15269 919 aaKnown RBP5.3□□□□□ -1.56
SMG8-205ENST00000580798 CHRNA2Q15822 529 aa5.3□□□□□ -1.56
SMG8-205ENST00000580798 PRSS53Q2L4Q9 553 aa5.3□□□□□ -1.56
SMG8-205ENST00000580798 KRTAP15-1Q3LI76 137 aa5.3□□□□□ -1.56
SMG8-205ENST00000580798 EMC4Q5J8M3 183 aa5.3□□□□□ -1.56
SMG8-205ENST00000580798 PHF19Q5T6S3 580 aa5.3□□□□□ -1.56
SMG8-205ENST00000580798 AGBL4Q5VU57 503 aa5.3□□□□□ -1.56
SMG8-205ENST00000580798 STEAP3Q658P3 488 aa5.3□□□□□ -1.56
SMG8-205ENST00000580798 E4F1Q66K89 784 aaPredicted RBP5.3□□□□□ -1.56
SMG8-205ENST00000580798 IQCEQ6IPM2 695 aa5.3□□□□□ -1.56
SMG8-205ENST00000580798 Q6ZUG5 572 aa5.3□□□□□ -1.56
SMG8-205ENST00000580798 TAX1BP1Q86VP1 789 aa5.3□□□□□ -1.56
SMG8-205ENST00000580798 ZNF227Q86WZ6 799 aa5.3□□□□□ -1.56
SMG8-205ENST00000580798 FAM178BQ8IXR5 827 aa5.3□□□□□ -1.56
SMG8-205ENST00000580798 GIMAP8Q8ND71 665 aaPredicted RBP5.3□□□□□ -1.56
SMG8-205ENST00000580798 DIO2Q92813 273 aa5.3□□□□□ -1.56
SMG8-205ENST00000580798 ACTR10Q9NZ32 417 aa5.3□□□□□ -1.56
SMG8-205ENST00000580798 COA3Q9Y2R0 106 aaPredicted RBP5.3□□□□□ -1.56
SMG8-205ENST00000580798 MRVI1Q9Y6F6 885 aa5.3□□□□□ -1.56
SMG8-205ENST00000580798 CADPSQ9ULU8 1353 aa5.29□□□□□ -1.56
SMG8-205ENST00000580798 MYO1BO43795 1136 aa5.29□□□□□ -1.56
SMG8-205ENST00000580798 SNRPB2P08579 225 aaKnown RBP5.29□□□□□ -1.56
SMG8-205ENST00000580798 ATF4P18848 351 aaPredicted RBP5.29□□□□□ -1.56
SMG8-205ENST00000580798 COMTP21964 271 aa5.29□□□□□ -1.56
SMG8-205ENST00000580798 KCNAB2Q13303 367 aa5.29□□□□□ -1.56
SMG8-205ENST00000580798 SF1Q15637 639 aaKnown RBP5.29□□□□□ -1.56
SMG8-205ENST00000580798 SV2CQ496J9 727 aa5.29□□□□□ -1.56
SMG8-205ENST00000580798 LARP1BQ659C4 914 aaKnown RBP5.29□□□□□ -1.56
SMG8-205ENST00000580798 GPR155Q7Z3F1 870 aa5.29□□□□□ -1.56
SMG8-205ENST00000580798 PROSER1Q86XN7 944 aa5.29□□□□□ -1.56
SMG8-205ENST00000580798 DNAJC10Q8IXB1 793 aa5.29□□□□□ -1.56
SMG8-205ENST00000580798 AJUBAQ96IF1 538 aa5.29□□□□□ -1.56
SMG8-205ENST00000580798 DRC1Q96MC2 740 aa5.29□□□□□ -1.56
SMG8-205ENST00000580798 MEFVO15553 781 aaPredicted RBP5.28□□□□□ -1.56
SMG8-205ENST00000580798 SUSD5O60279 629 aa5.28□□□□□ -1.56
SMG8-205ENST00000580798 SCG5P05408 212 aa5.28□□□□□ -1.56
SMG8-205ENST00000580798 HOXC12P31275 282 aa5.28□□□□□ -1.56
SMG8-205ENST00000580798 CSF2RBP32927 897 aa5.28□□□□□ -1.56
SMG8-205ENST00000580798 MRM1Q6IN84 353 aaKnown RBP5.28□□□□□ -1.56
SMG8-205ENST00000580798 FUKQ8N0W3 1084 aa5.28□□□□□ -1.56
SMG8-205ENST00000580798 CNPY4Q8N129 248 aa5.28□□□□□ -1.56
SMG8-205ENST00000580798 KREMEN2Q8NCW0 462 aa5.28□□□□□ -1.56
SMG8-205ENST00000580798 RCBTB1Q8NDN9 531 aa5.28□□□□□ -1.56
SMG8-205ENST00000580798 NEU4Q8WWR8 484 aaPredicted RBP5.28□□□□□ -1.56
SMG8-205ENST00000580798 HSPBP1Q9NZL4 362 aa5.28□□□□□ -1.56
SMG8-205ENST00000580798 LRP2BPQ9P2M1 347 aa5.28□□□□□ -1.56
SMG8-205ENST00000580798 MARCH6O60337 910 aa5.27□□□□□ -1.57
SMG8-205ENST00000580798 KNG1P01042 644 aa5.27□□□□□ -1.57
SMG8-205ENST00000580798 C1SP09871 688 aa5.27□□□□□ -1.57
SMG8-205ENST00000580798 LCP1P13796 627 aa5.27□□□□□ -1.57
SMG8-205ENST00000580798 TESK1Q15569 626 aa5.27□□□□□ -1.57
SMG8-205ENST00000580798 SMAD2Q15796 467 aaKnown RBP5.27□□□□□ -1.57
SMG8-205ENST00000580798 TNNI3KQ59H18 835 aa5.27□□□□□ -1.57
SMG8-205ENST00000580798 ACBD5Q5T8D3 534 aaPredicted RBP5.27□□□□□ -1.57
SMG8-205ENST00000580798 DENND5AQ6IQ26 1287 aa5.27□□□□□ -1.57
SMG8-205ENST00000580798 Q6ZSN1 163 aa5.27□□□□□ -1.57
SMG8-205ENST00000580798 PPIL6Q8IXY8 311 aa5.27□□□□□ -1.57
SMG8-205ENST00000580798 DTX3Q8N9I9 347 aa5.27□□□□□ -1.57
SMG8-205ENST00000580798 CAPN10Q9HC96 672 aa5.27□□□□□ -1.57
SMG8-205ENST00000580798 DLL4Q9NR61 685 aa5.27□□□□□ -1.57
SMG8-205ENST00000580798 MYOTQ9UBF9 498 aa5.27□□□□□ -1.57
SMG8-205ENST00000580798 LAS1LQ9Y4W2 734 aaKnown RBP5.27□□□□□ -1.57
SMG8-205ENST00000580798 H7BY64 318 aa5.26□□□□□ -1.57
SMG8-205ENST00000580798 TPD52L2O43399 206 aaKnown RBP5.26□□□□□ -1.57
SMG8-205ENST00000580798 SSBP05455 408 aaKnown RBP eCLIP5.26□□□□□ -1.57
SMG8-205ENST00000580798 ACO1P21399 889 aaKnown RBP5.26□□□□□ -1.57
SMG8-205ENST00000580798 LTBRP36941 435 aa5.26□□□□□ -1.57
SMG8-205ENST00000580798 KCNJ6P48051 423 aa5.26□□□□□ -1.57
SMG8-205ENST00000580798 GFRA1P56159 465 aa5.26□□□□□ -1.57
SMG8-205ENST00000580798 SPTY2D1Q68D10 685 aaPredicted RBP5.26□□□□□ -1.57
SMG8-205ENST00000580798 LDLRAD3Q86YD5 345 aa5.26□□□□□ -1.57
SMG8-205ENST00000580798 C1orf210Q8IVY1 113 aa5.26□□□□□ -1.57
SMG8-205ENST00000580798 IFNL2Q8IZJ0 200 aa5.26□□□□□ -1.57
SMG8-205ENST00000580798 TMEM145Q8NBT3 493 aa5.26□□□□□ -1.57
SMG8-205ENST00000580798 MICAL1Q8TDZ2 1067 aa5.26□□□□□ -1.57
SMG8-205ENST00000580798 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.26□□□□□ -1.57
SMG8-205ENST00000580798 SREK1Q8WXA9 508 aaKnown RBP5.26□□□□□ -1.57
SMG8-205ENST00000580798 NEIL1Q96FI4 390 aaPredicted RBP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms