RNA–Protein interactions for RNA: ENST00000580670.6

CDK5RAP3-219, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-219ENST00000580670 MAGEF1Q9HAY2 307 aa15.51■□□□□ 0.07
CDK5RAP3-219ENST00000580670 JPH1Q9HDC5 661 aaPredicted RBP15.51■□□□□ 0.07
CDK5RAP3-219ENST00000580670 RNF186Q9NXI6 227 aa15.51■□□□□ 0.07
CDK5RAP3-219ENST00000580670 RGL1Q9NZL6 768 aa15.51■□□□□ 0.07
CDK5RAP3-219ENST00000580670 POTEFA5A3E0 1075 aa15.5■□□□□ 0.07
CDK5RAP3-219ENST00000580670 SORBS3O60504 671 aa15.5■□□□□ 0.07
CDK5RAP3-219ENST00000580670 TRPA1O75762 1119 aa15.5■□□□□ 0.07
CDK5RAP3-219ENST00000580670 CCNE2O96020 404 aa15.5■□□□□ 0.07
CDK5RAP3-219ENST00000580670 TGFB3P10600 412 aa15.5■□□□□ 0.07
CDK5RAP3-219ENST00000580670 CTGFP29279 349 aa15.5■□□□□ 0.07
CDK5RAP3-219ENST00000580670 FCGRTP55899 365 aa15.5■□□□□ 0.07
CDK5RAP3-219ENST00000580670 CTTNQ14247 550 aaKnown RBP15.5■□□□□ 0.07
CDK5RAP3-219ENST00000580670 ZNF746Q6NUN9 644 aaPredicted RBP15.5■□□□□ 0.07
CDK5RAP3-219ENST00000580670 POTEGQ6S5H5 508 aa15.5■□□□□ 0.07
CDK5RAP3-219ENST00000580670 SASS6Q6UVJ0 657 aa15.5■□□□□ 0.07
CDK5RAP3-219ENST00000580670 MAMDC4Q6UXC1 1216 aa15.5■□□□□ 0.07
CDK5RAP3-219ENST00000580670 KCNK18Q7Z418 384 aa15.5■□□□□ 0.07
CDK5RAP3-219ENST00000580670 RAD54LQ92698 747 aa15.5■□□□□ 0.07
CDK5RAP3-219ENST00000580670 MTRQ99707 1265 aa15.5■□□□□ 0.07
CDK5RAP3-219ENST00000580670 BCAS3Q9H6U6 928 aa15.5■□□□□ 0.07
CDK5RAP3-219ENST00000580670 TUFT1Q9NNX1 390 aa15.5■□□□□ 0.07
CDK5RAP3-219ENST00000580670 BLOC1S4Q9NUP1 217 aa15.5■□□□□ 0.07
CDK5RAP3-219ENST00000580670 SLC9A2Q9UBY0 812 aa15.5■□□□□ 0.07
CDK5RAP3-219ENST00000580670 WDR64B1ANS9 1081 aa15.49■□□□□ 0.07
CDK5RAP3-219ENST00000580670 SLITRK3O94933 977 aa15.49■□□□□ 0.07
CDK5RAP3-219ENST00000580670 HOXC6P09630 235 aa15.49■□□□□ 0.07
CDK5RAP3-219ENST00000580670 CCDC192P0DO97 292 aa15.49■□□□□ 0.07
CDK5RAP3-219ENST00000580670 UBA1P22314 1058 aaKnown RBP15.49■□□□□ 0.07
CDK5RAP3-219ENST00000580670 SFNP31947 248 aa15.49■□□□□ 0.07
CDK5RAP3-219ENST00000580670 RGS2P41220 211 aa15.49■□□□□ 0.07
CDK5RAP3-219ENST00000580670 PSMC4P43686 418 aa15.49■□□□□ 0.07
CDK5RAP3-219ENST00000580670 JAK3P52333 1124 aa15.49■□□□□ 0.07
CDK5RAP3-219ENST00000580670 LACTBP83111 547 aaPredicted RBP15.49■□□□□ 0.07
CDK5RAP3-219ENST00000580670 KCNV1Q6PIU1 500 aa15.49■□□□□ 0.07
CDK5RAP3-219ENST00000580670 CYFIP1Q7L576 1253 aa15.49■□□□□ 0.07
CDK5RAP3-219ENST00000580670 TPH2Q8IWU9 490 aa15.49■□□□□ 0.07
CDK5RAP3-219ENST00000580670 GIMAP8Q8ND71 665 aaPredicted RBP15.49■□□□□ 0.07
CDK5RAP3-219ENST00000580670 NEK9Q8TD19 979 aa15.49■□□□□ 0.07
CDK5RAP3-219ENST00000580670 LARP4BQ92615 738 aaKnown RBP15.49■□□□□ 0.07
CDK5RAP3-219ENST00000580670 USP6NLQ92738 828 aa15.49■□□□□ 0.07
CDK5RAP3-219ENST00000580670 TINF2Q9BSI4 451 aa15.49■□□□□ 0.07
CDK5RAP3-219ENST00000580670 CFHR5Q9BXR6 569 aa15.49■□□□□ 0.07
CDK5RAP3-219ENST00000580670 KBTBD4Q9NVX7 518 aa15.49■□□□□ 0.07
CDK5RAP3-219ENST00000580670 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.49■□□□□ 0.07
CDK5RAP3-219ENST00000580670 GJD2Q9UKL4 321 aa15.49■□□□□ 0.07
CDK5RAP3-219ENST00000580670 PCDHA5Q9Y5H7 936 aa15.49■□□□□ 0.07
CDK5RAP3-219ENST00000580670 MGAMO43451 1857 aa15.49■□□□□ 0.07
CDK5RAP3-219ENST00000580670 DOCK5Q9H7D0 1870 aa15.49■□□□□ 0.07
CDK5RAP3-219ENST00000580670 SNAI1O95863 264 aaPredicted RBP15.49■□□□□ 0.07
CDK5RAP3-219ENST00000580670 CASP1P29466 404 aa15.49■□□□□ 0.07
CDK5RAP3-219ENST00000580670 SP4Q02446 784 aa15.49■□□□□ 0.07
CDK5RAP3-219ENST00000580670 TYRO3Q06418 890 aa15.49■□□□□ 0.07
CDK5RAP3-219ENST00000580670 NEDD9Q14511 834 aa15.49■□□□□ 0.07
CDK5RAP3-219ENST00000580670 DHX8Q14562 1220 aaKnown RBP15.49■□□□□ 0.07
CDK5RAP3-219ENST00000580670 MCM6Q14566 821 aa15.49■□□□□ 0.07
CDK5RAP3-219ENST00000580670 LY6KQ17RY6 165 aa15.49■□□□□ 0.07
CDK5RAP3-219ENST00000580670 SV2BQ7L1I2 683 aa15.49■□□□□ 0.07
CDK5RAP3-219ENST00000580670 MSL3Q8N5Y2 521 aaKnown RBP15.49■□□□□ 0.07
CDK5RAP3-219ENST00000580670 RDM1Q8NG50 284 aa15.49■□□□□ 0.07
CDK5RAP3-219ENST00000580670 FUCA2Q9BTY2 467 aa15.49■□□□□ 0.07
CDK5RAP3-219ENST00000580670 ARHGAP39Q9C0H5 1083 aa15.49■□□□□ 0.07
CDK5RAP3-219ENST00000580670 BLZF1Q9H2G9 400 aa15.49■□□□□ 0.07
CDK5RAP3-219ENST00000580670 TSPY26PQ9H489 355 aa15.49■□□□□ 0.07
CDK5RAP3-219ENST00000580670 VTA1Q9NP79 307 aa15.49■□□□□ 0.07
CDK5RAP3-219ENST00000580670 DDX41Q9UJV9 622 aaKnown RBP15.49■□□□□ 0.07
CDK5RAP3-219ENST00000580670 SYNGAP1Q96PV0 1343 aa15.48■□□□□ 0.07
CDK5RAP3-219ENST00000580670 ESPNB1AK53 854 aa15.48■□□□□ 0.07
CDK5RAP3-219ENST00000580670 E9PMD0 336 aa15.48■□□□□ 0.07
CDK5RAP3-219ENST00000580670 GTPBP6O43824 516 aaPredicted RBP15.48■□□□□ 0.07
CDK5RAP3-219ENST00000580670 SMC2O95347 1197 aa15.48■□□□□ 0.07
CDK5RAP3-219ENST00000580670 ARIH2O95376 493 aa15.48■□□□□ 0.07
CDK5RAP3-219ENST00000580670 CYP2B6P20813 491 aa15.48■□□□□ 0.07
CDK5RAP3-219ENST00000580670 SP3Q02447 781 aa15.48■□□□□ 0.07
CDK5RAP3-219ENST00000580670 DPYDQ12882 1025 aa15.48■□□□□ 0.07
CDK5RAP3-219ENST00000580670 SMAP1Q8IYB5 467 aaPredicted RBP15.48■□□□□ 0.07
CDK5RAP3-219ENST00000580670 BANK1Q8NDB2 785 aa15.48■□□□□ 0.07
CDK5RAP3-219ENST00000580670 SCFD2Q8WU76 684 aa15.48■□□□□ 0.07
CDK5RAP3-219ENST00000580670 SMARCE1Q969G3 411 aa15.48■□□□□ 0.07
CDK5RAP3-219ENST00000580670 TRIM47Q96LD4 638 aa15.48■□□□□ 0.07
CDK5RAP3-219ENST00000580670 APBA2Q99767 749 aa15.48■□□□□ 0.07
CDK5RAP3-219ENST00000580670 LXNQ9BS40 222 aa15.48■□□□□ 0.07
CDK5RAP3-219ENST00000580670 PDGFCQ9NRA1 345 aa15.48■□□□□ 0.07
CDK5RAP3-219ENST00000580670 TUBE1Q9UJT0 475 aa15.48■□□□□ 0.07
CDK5RAP3-219ENST00000580670 DNM3Q9UQ16 869 aa15.48■□□□□ 0.07
CDK5RAP3-219ENST00000580670 A0A087WWV3 80 aa15.47■□□□□ 0.07
CDK5RAP3-219ENST00000580670 BIN1O00499 593 aa15.47■□□□□ 0.07
CDK5RAP3-219ENST00000580670 GGPS1O95749 300 aa15.47■□□□□ 0.07
CDK5RAP3-219ENST00000580670 P4HBP07237 508 aaKnown RBP15.47■□□□□ 0.07
CDK5RAP3-219ENST00000580670 MUTP22033 750 aa15.47■□□□□ 0.07
CDK5RAP3-219ENST00000580670 ACTR2P61160 394 aa15.47■□□□□ 0.07
CDK5RAP3-219ENST00000580670 PSMC6P62333 389 aa15.47■□□□□ 0.07
CDK5RAP3-219ENST00000580670 AMPD3Q01432 767 aa15.47■□□□□ 0.07
CDK5RAP3-219ENST00000580670 CUL4BQ13620 913 aa15.47■□□□□ 0.07
CDK5RAP3-219ENST00000580670 TTLL4Q14679 1199 aa15.47■□□□□ 0.07
CDK5RAP3-219ENST00000580670 KIF22Q14807 665 aa15.47■□□□□ 0.07
CDK5RAP3-219ENST00000580670 TAPT1Q6NXT6 567 aa15.47■□□□□ 0.07
CDK5RAP3-219ENST00000580670 GAS2L3Q86XJ1 694 aa15.47■□□□□ 0.07
CDK5RAP3-219ENST00000580670 KCTD17Q8N5Z5 321 aa15.47■□□□□ 0.07
CDK5RAP3-219ENST00000580670 PCDHA10Q9Y5I2 948 aa15.47■□□□□ 0.07
CDK5RAP3-219ENST00000580670 THSD7BQ9C0I4 1608 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms