RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 DDX39AO00148 427 aaKnown RBP16.07■□□□□ 0.16
SKA2-205ENST00000580541 GJA9P57773 515 aa16.07■□□□□ 0.16
SKA2-205ENST00000580541 DGKDQ16760 1214 aa16.07■□□□□ 0.16
SKA2-205ENST00000580541 KRT79Q5XKE5 535 aa16.07■□□□□ 0.16
SKA2-205ENST00000580541 HAUS3Q68CZ6 603 aa16.07■□□□□ 0.16
SKA2-205ENST00000580541 RNF180Q86T96 592 aa16.07■□□□□ 0.16
SKA2-205ENST00000580541 NEK9Q8TD19 979 aa16.07■□□□□ 0.16
SKA2-205ENST00000580541 TMEM106CQ9BVX2 250 aa16.07■□□□□ 0.16
SKA2-205ENST00000580541 FTOQ9C0B1 505 aaKnown RBP eCLIP16.07■□□□□ 0.16
SKA2-205ENST00000580541 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.07■□□□□ 0.16
SKA2-205ENST00000580541 AZI2Q9H6S1 392 aa16.07■□□□□ 0.16
SKA2-205ENST00000580541 XPNPEP3Q9NQH7 507 aa16.07■□□□□ 0.16
SKA2-205ENST00000580541 DISC1Q9NRI5 854 aa16.07■□□□□ 0.16
SKA2-205ENST00000580541 ELP1O95163 1332 aa16.07■□□□□ 0.16
SKA2-205ENST00000580541 LRRC37A2A6NM11 1700 aa16.06■□□□□ 0.16
SKA2-205ENST00000580541 CCL5P13501 91 aa16.06■□□□□ 0.16
SKA2-205ENST00000580541 UBA7P41226 1012 aa16.06■□□□□ 0.16
SKA2-205ENST00000580541 ACTR2P61160 394 aa16.06■□□□□ 0.16
SKA2-205ENST00000580541 ARHGAP1Q07960 439 aa16.06■□□□□ 0.16
SKA2-205ENST00000580541 EPHA7Q15375 998 aa16.06■□□□□ 0.16
SKA2-205ENST00000580541 FAM160B1Q5W0V3 765 aa16.06■□□□□ 0.16
SKA2-205ENST00000580541 ADALQ6DHV7 355 aa16.06■□□□□ 0.16
SKA2-205ENST00000580541 NCAPH2Q6IBW4 605 aa16.06■□□□□ 0.16
SKA2-205ENST00000580541 KCTD17Q8N5Z5 321 aa16.06■□□□□ 0.16
SKA2-205ENST00000580541 IGSF22Q8N9C0 903 aa16.06■□□□□ 0.16
SKA2-205ENST00000580541 PCSK9Q8NBP7 692 aaKnown RBP16.06■□□□□ 0.16
SKA2-205ENST00000580541 ZNF333Q96JL9 665 aa16.06■□□□□ 0.16
SKA2-205ENST00000580541 UIMC1Q96RL1 719 aa16.06■□□□□ 0.16
SKA2-205ENST00000580541 A6NJR5 290 aa16.05■□□□□ 0.16
SKA2-205ENST00000580541 CHMP2AO43633 222 aa16.05■□□□□ 0.16
SKA2-205ENST00000580541 ATG7O95352 703 aa16.05■□□□□ 0.16
SKA2-205ENST00000580541 P4HBP07237 508 aaKnown RBP16.05■□□□□ 0.16
SKA2-205ENST00000580541 C6orf222P0C671 652 aaPredicted RBP16.05■□□□□ 0.16
SKA2-205ENST00000580541 MUTP22033 750 aa16.05■□□□□ 0.16
SKA2-205ENST00000580541 SLC26A2P50443 739 aa16.05■□□□□ 0.16
SKA2-205ENST00000580541 NKX3-2P78367 333 aa16.05■□□□□ 0.16
SKA2-205ENST00000580541 FSCN1Q16658 493 aaKnown RBP16.05■□□□□ 0.16
SKA2-205ENST00000580541 GNASQ5JWF2 1037 aa16.05■□□□□ 0.16
SKA2-205ENST00000580541 AFG1LQ8WV93 481 aa16.05■□□□□ 0.16
SKA2-205ENST00000580541 COPS5Q92905 334 aa16.05■□□□□ 0.16
SKA2-205ENST00000580541 ATP6V0A1Q93050 837 aa16.05■□□□□ 0.16
SKA2-205ENST00000580541 GPR20Q99678 358 aa16.05■□□□□ 0.16
SKA2-205ENST00000580541 PYM1Q9BRP8 204 aaKnown RBP16.05■□□□□ 0.16
SKA2-205ENST00000580541 MCOLN1Q9GZU1 580 aa16.05■□□□□ 0.16
SKA2-205ENST00000580541 UNC93B1Q9H1C4 597 aa16.05■□□□□ 0.16
SKA2-205ENST00000580541 UPF3AQ9H1J1 476 aaKnown RBP16.05■□□□□ 0.16
SKA2-205ENST00000580541 UNC45AQ9H3U1 944 aa16.05■□□□□ 0.16
SKA2-205ENST00000580541 SMARCAD1Q9H4L7 1026 aa16.05■□□□□ 0.16
SKA2-205ENST00000580541 PAK6Q9NQU5 681 aaPredicted RBP16.05■□□□□ 0.16
SKA2-205ENST00000580541 FAM13BQ9NYF5 915 aa16.05■□□□□ 0.16
SKA2-205ENST00000580541 CCDC39Q9UFE4 941 aa16.05■□□□□ 0.16
SKA2-205ENST00000580541 FBXO2Q9UK22 296 aaPredicted RBP16.05■□□□□ 0.16
SKA2-205ENST00000580541 VAV3Q9UKW4 847 aa16.05■□□□□ 0.16
SKA2-205ENST00000580541 BACH1O14867 736 aa16.04■□□□□ 0.16
SKA2-205ENST00000580541 SP4Q02446 784 aa16.04■□□□□ 0.16
SKA2-205ENST00000580541 HSDL1Q3SXM5 330 aa16.04■□□□□ 0.16
SKA2-205ENST00000580541 B3GNT9Q6UX72 402 aa16.04■□□□□ 0.16
SKA2-205ENST00000580541 ABHD15Q6UXT9 468 aa16.04■□□□□ 0.16
SKA2-205ENST00000580541 RASSF8Q8NHQ8 419 aa16.04■□□□□ 0.16
SKA2-205ENST00000580541 GJA10Q969M2 543 aa16.04■□□□□ 0.16
SKA2-205ENST00000580541 CALML4Q96GE6 196 aa16.04■□□□□ 0.16
SKA2-205ENST00000580541 CDK5RAP3Q96JB5 506 aa16.04■□□□□ 0.16
SKA2-205ENST00000580541 TSEN34Q9BSV6 310 aaKnown RBP16.04■□□□□ 0.16
SKA2-205ENST00000580541 NT5C3AQ9H0P0 336 aa16.04■□□□□ 0.16
SKA2-205ENST00000580541 TUFT1Q9NNX1 390 aa16.04■□□□□ 0.16
SKA2-205ENST00000580541 ZNF215Q9UL58 517 aaPredicted RBP16.04■□□□□ 0.16
SKA2-205ENST00000580541 PCDHA7Q9UN72 937 aa16.04■□□□□ 0.16
SKA2-205ENST00000580541 KDM3AQ9Y4C1 1321 aa16.03■□□□□ 0.16
SKA2-205ENST00000580541 CABYRO75952 493 aa16.03■□□□□ 0.16
SKA2-205ENST00000580541 GJB1P08034 283 aa16.03■□□□□ 0.16
SKA2-205ENST00000580541 SUPT20HL2P0C7V6 817 aa16.03■□□□□ 0.16
SKA2-205ENST00000580541 CMA1P23946 247 aa16.03■□□□□ 0.16
SKA2-205ENST00000580541 TCF7P36402 384 aaPredicted RBP16.03■□□□□ 0.16
SKA2-205ENST00000580541 QARSP47897 775 aaKnown RBP16.03■□□□□ 0.16
SKA2-205ENST00000580541 STAT5BP51692 787 aa16.03■□□□□ 0.16
SKA2-205ENST00000580541 PSMC5P62195 406 aa16.03■□□□□ 0.16
SKA2-205ENST00000580541 SPIRE1Q08AE8 756 aa16.03■□□□□ 0.16
SKA2-205ENST00000580541 PLPPR4Q7Z2D5 763 aa16.03■□□□□ 0.16
SKA2-205ENST00000580541 GLG1Q92896 1179 aa16.03■□□□□ 0.16
SKA2-205ENST00000580541 DEFB118Q96PH6 123 aa16.03■□□□□ 0.16
SKA2-205ENST00000580541 POLR3CQ9BUI4 534 aaPredicted RBP16.03■□□□□ 0.16
SKA2-205ENST00000580541 KATNAL1Q9BW62 490 aa16.03■□□□□ 0.16
SKA2-205ENST00000580541 CSRNP2Q9H175 543 aa16.03■□□□□ 0.16
SKA2-205ENST00000580541 ZSWIM4Q9H7M6 989 aa16.03■□□□□ 0.16
SKA2-205ENST00000580541 ZNF302Q9NR11 478 aa16.03■□□□□ 0.16
SKA2-205ENST00000580541 SYNRGQ9UMZ2 1314 aa16.02■□□□□ 0.16
SKA2-205ENST00000580541 A0A1W2PQ27 194 aa16.02■□□□□ 0.16
SKA2-205ENST00000580541 A0A1W2PQ64 194 aa16.02■□□□□ 0.16
SKA2-205ENST00000580541 A0A1W2PQD8 194 aa16.02■□□□□ 0.16
SKA2-205ENST00000580541 GSTTP1A0A1W2PQM5 241 aa16.02■□□□□ 0.16
SKA2-205ENST00000580541 POTEMA6NI47 508 aa16.02■□□□□ 0.16
SKA2-205ENST00000580541 KBTBD13C9JR72 458 aa16.02■□□□□ 0.16
SKA2-205ENST00000580541 SORBS3O60504 671 aa16.02■□□□□ 0.16
SKA2-205ENST00000580541 CCNE2O96020 404 aa16.02■□□□□ 0.16
SKA2-205ENST00000580541 TFRCP02786 760 aaKnown RBP16.02■□□□□ 0.16
SKA2-205ENST00000580541 MMP3P08254 477 aa16.02■□□□□ 0.16
SKA2-205ENST00000580541 PTMSP20962 102 aa16.02■□□□□ 0.16
SKA2-205ENST00000580541 RPA1P27694 616 aa16.02■□□□□ 0.16
SKA2-205ENST00000580541 CST5P28325 142 aaPredicted RBP16.02■□□□□ 0.16
SKA2-205ENST00000580541 CCT6AP40227 531 aaKnown RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms