RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 UBIAD1Q9Y5Z9 338 aa28.38■■■□□ 2.13
CDC42EP4-205ENST00000580315 MAFGO15525 162 aa28.37■■■□□ 2.13
CDC42EP4-205ENST00000580315 CDKL5O76039 1030 aa28.37■■■□□ 2.13
CDC42EP4-205ENST00000580315 POU3F3P20264 500 aaPredicted RBP28.37■■■□□ 2.13
CDC42EP4-205ENST00000580315 CLK2P49760 499 aaKnown RBP28.37■■■□□ 2.13
CDC42EP4-205ENST00000580315 MTMR1Q13613 665 aa28.37■■■□□ 2.13
CDC42EP4-205ENST00000580315 PTGISQ16647 500 aa28.37■■■□□ 2.13
CDC42EP4-205ENST00000580315 BICD2Q8TD16 824 aa28.37■■■□□ 2.13
CDC42EP4-205ENST00000580315 KAT2BQ92831 832 aa28.37■■■□□ 2.13
CDC42EP4-205ENST00000580315 PGBD1Q96JS3 809 aa28.37■■■□□ 2.13
CDC42EP4-205ENST00000580315 CERS4Q9HA82 394 aa28.37■■■□□ 2.13
CDC42EP4-205ENST00000580315 MTCH2Q9Y6C9 303 aa28.37■■■□□ 2.13
CDC42EP4-205ENST00000580315 ZNF286BP0CG31 522 aa28.36■■■□□ 2.13
CDC42EP4-205ENST00000580315 ITGB5P18084 799 aa28.36■■■□□ 2.13
CDC42EP4-205ENST00000580315 PSEN2P49810 448 aa28.36■■■□□ 2.13
CDC42EP4-205ENST00000580315 HERC6Q8IVU3 1022 aa28.36■■■□□ 2.13
CDC42EP4-205ENST00000580315 REXO1Q8N1G1 1221 aaKnown RBP28.36■■■□□ 2.13
CDC42EP4-205ENST00000580315 CTAGE1Q96RT6 745 aa28.36■■■□□ 2.13
CDC42EP4-205ENST00000580315 JADE2Q9NQC1 790 aa28.36■■■□□ 2.13
CDC42EP4-205ENST00000580315 SH3GLB2Q9NR46 395 aa28.36■■■□□ 2.13
CDC42EP4-205ENST00000580315 TMEM260Q9NX78 707 aa28.36■■■□□ 2.13
CDC42EP4-205ENST00000580315 EPOPA6NHQ4 379 aa28.35■■■□□ 2.13
CDC42EP4-205ENST00000580315 DEXIO95424 95 aa28.35■■■□□ 2.13
CDC42EP4-205ENST00000580315 F2P00734 622 aa28.35■■■□□ 2.13
CDC42EP4-205ENST00000580315 SREBF1P36956 1147 aa28.35■■■□□ 2.13
CDC42EP4-205ENST00000580315 AK2P54819 239 aa28.35■■■□□ 2.13
CDC42EP4-205ENST00000580315 JAKMIP3Q5VZ66 844 aa28.35■■■□□ 2.13
CDC42EP4-205ENST00000580315 C7orf31Q8N865 590 aa28.35■■■□□ 2.13
CDC42EP4-205ENST00000580315 PFKFB2O60825 505 aa28.34■■■□□ 2.13
CDC42EP4-205ENST00000580315 ARHGEF15O94989 841 aa28.34■■■□□ 2.13
CDC42EP4-205ENST00000580315 BMP1P13497 986 aa28.34■■■□□ 2.13
CDC42EP4-205ENST00000580315 COL9A1P20849 921 aa28.34■■■□□ 2.13
CDC42EP4-205ENST00000580315 TFF2Q03403 129 aa28.34■■■□□ 2.13
CDC42EP4-205ENST00000580315 TAP1Q03518 808 aa28.34■■■□□ 2.13
CDC42EP4-205ENST00000580315 MFSD10Q14728 455 aa28.34■■■□□ 2.13
CDC42EP4-205ENST00000580315 C8orf34Q49A92 452 aa28.34■■■□□ 2.13
CDC42EP4-205ENST00000580315 GDF6Q6KF10 455 aaPredicted RBP28.34■■■□□ 2.13
CDC42EP4-205ENST00000580315 SESTD1Q86VW0 696 aa28.34■■■□□ 2.13
CDC42EP4-205ENST00000580315 CAGE1Q8TC20 777 aa28.34■■■□□ 2.13
CDC42EP4-205ENST00000580315 MXRA8Q9BRK3 442 aa28.34■■■□□ 2.13
CDC42EP4-205ENST00000580315 ALG1Q9BT22 464 aa28.34■■■□□ 2.13
CDC42EP4-205ENST00000580315 BCAS3Q9H6U6 928 aa28.34■■■□□ 2.13
CDC42EP4-205ENST00000580315 VPS54Q9P1Q0 977 aa28.34■■■□□ 2.13
CDC42EP4-205ENST00000580315 TPCN1Q9ULQ1 816 aa28.34■■■□□ 2.13
CDC42EP4-205ENST00000580315 PRRC2BQ5JSZ5 2229 aaKnown RBP28.34■■■□□ 2.13
CDC42EP4-205ENST00000580315 KIF28PB7ZC32 967 aa28.33■■■□□ 2.13
CDC42EP4-205ENST00000580315 GTPBP6O43824 516 aaPredicted RBP28.33■■■□□ 2.13
CDC42EP4-205ENST00000580315 BAIAP3O94812 1187 aa28.33■■■□□ 2.13
CDC42EP4-205ENST00000580315 ZNF76P36508 570 aa28.33■■■□□ 2.13
CDC42EP4-205ENST00000580315 NEK4P51957 841 aa28.33■■■□□ 2.13
CDC42EP4-205ENST00000580315 SCRN1Q12765 414 aa28.33■■■□□ 2.13
CDC42EP4-205ENST00000580315 SKIV2LQ15477 1246 aaKnown RBP28.33■■■□□ 2.13
CDC42EP4-205ENST00000580315 KIAA0753Q2KHM9 967 aa28.33■■■□□ 2.13
CDC42EP4-205ENST00000580315 CCDC155Q8N6L0 562 aa28.33■■■□□ 2.13
CDC42EP4-205ENST00000580315 AFAP1L1Q8TED9 768 aa28.33■■■□□ 2.13
CDC42EP4-205ENST00000580315 GPNMBQ14956 572 aa28.32■■■□□ 2.12
CDC42EP4-205ENST00000580315 AAK1Q2M2I8 961 aa28.32■■■□□ 2.12
CDC42EP4-205ENST00000580315 CEP55Q53EZ4 464 aa28.32■■■□□ 2.12
CDC42EP4-205ENST00000580315 ARNTL2Q8WYA1 636 aa28.32■■■□□ 2.12
CDC42EP4-205ENST00000580315 GPR20Q99678 358 aa28.32■■■□□ 2.12
CDC42EP4-205ENST00000580315 TANC1Q9C0D5 1861 aa28.32■■■□□ 2.12
CDC42EP4-205ENST00000580315 TET1Q8NFU7 2136 aa28.31■■■□□ 2.12
CDC42EP4-205ENST00000580315 HAS3O00219 553 aa28.31■■■□□ 2.12
CDC42EP4-205ENST00000580315 KCNA2P16389 499 aa28.31■■■□□ 2.12
CDC42EP4-205ENST00000580315 NLRP5P59047 1200 aa28.31■■■□□ 2.12
CDC42EP4-205ENST00000580315 ARHGAP4P98171 946 aa28.31■■■□□ 2.12
CDC42EP4-205ENST00000580315 SP4Q02446 784 aa28.31■■■□□ 2.12
CDC42EP4-205ENST00000580315 FAM177A1Q8N128 213 aaPredicted RBP28.31■■■□□ 2.12
CDC42EP4-205ENST00000580315 NECAB3Q96P71 396 aaPredicted RBP28.31■■■□□ 2.12
CDC42EP4-205ENST00000580315 KCNH7Q9NS40 1196 aa28.31■■■□□ 2.12
CDC42EP4-205ENST00000580315 PKD2L1Q9P0L9 805 aa28.31■■■□□ 2.12
CDC42EP4-205ENST00000580315 ATP9AO75110 1047 aa28.3■■■□□ 2.12
CDC42EP4-205ENST00000580315 LGALS2P05162 132 aa28.3■■■□□ 2.12
CDC42EP4-205ENST00000580315 SELPP16109 830 aa28.3■■■□□ 2.12
CDC42EP4-205ENST00000580315 KRT40Q6A162 431 aa28.3■■■□□ 2.12
CDC42EP4-205ENST00000580315 DHX38Q92620 1227 aaKnown RBP28.3■■■□□ 2.12
CDC42EP4-205ENST00000580315 C16orf70Q9BSU1 422 aa28.3■■■□□ 2.12
CDC42EP4-205ENST00000580315 HDAC6Q9UBN7 1215 aa28.3■■■□□ 2.12
CDC42EP4-205ENST00000580315 GTF2IRD1Q9UHL9 959 aa28.3■■■□□ 2.12
CDC42EP4-205ENST00000580315 H3BRB1 525 aa28.29■■■□□ 2.12
CDC42EP4-205ENST00000580315 KCNJ6P48051 423 aa28.29■■■□□ 2.12
CDC42EP4-205ENST00000580315 KCNQ1P51787 676 aa28.29■■■□□ 2.12
CDC42EP4-205ENST00000580315 LRRC8DQ7L1W4 858 aa28.29■■■□□ 2.12
CDC42EP4-205ENST00000580315 TUT1Q9H6E5 874 aaKnown RBP28.29■■■□□ 2.12
CDC42EP4-205ENST00000580315 ZNF215Q9UL58 517 aaPredicted RBP28.29■■■□□ 2.12
CDC42EP4-205ENST00000580315 TLL1O43897 1013 aa28.28■■■□□ 2.12
CDC42EP4-205ENST00000580315 CYP3A4P08684 503 aa28.28■■■□□ 2.12
CDC42EP4-205ENST00000580315 WDR5P61964 334 aaKnown RBP28.28■■■□□ 2.12
CDC42EP4-205ENST00000580315 RBL2Q08999 1139 aa28.28■■■□□ 2.12
CDC42EP4-205ENST00000580315 NIPA1Q7RTP0 329 aa28.28■■■□□ 2.12
CDC42EP4-205ENST00000580315 CYP2W1Q8TAV3 490 aa28.28■■■□□ 2.12
CDC42EP4-205ENST00000580315 SDF4Q9BRK5 362 aa28.28■■■□□ 2.12
CDC42EP4-205ENST00000580315 STK36Q9NRP7 1315 aa28.27■■■□□ 2.12
CDC42EP4-205ENST00000580315 MEIS1O00470 390 aa28.27■■■□□ 2.12
CDC42EP4-205ENST00000580315 UTP14CQ5TAP6 766 aaKnown RBP28.27■■■□□ 2.12
CDC42EP4-205ENST00000580315 SPRED2Q7Z698 418 aa28.27■■■□□ 2.12
CDC42EP4-205ENST00000580315 SEPT1Q8WYJ6 367 aa28.27■■■□□ 2.12
CDC42EP4-205ENST00000580315 JPH1Q9HDC5 661 aaPredicted RBP28.27■■■□□ 2.12
CDC42EP4-205ENST00000580315 PCDHA4Q9UN74 947 aa28.27■■■□□ 2.12
CDC42EP4-205ENST00000580315 PARNO95453 639 aaKnown RBP28.26■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms