RNA–Protein interactions for RNA: ENST00000579466.1

MSI2-208, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 186 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-208	ENST00000579466	RIOX1	Q9H6W3	641 aa		11.11	□□□□□ -0.63
MSI2-208	ENST00000579466	TAF6L	Q9Y6J9	622 aa		11.11	□□□□□ -0.63
MSI2-208	ENST00000579466	COL4A6	Q14031	1691 aa		11.11	□□□□□ -0.63
MSI2-208	ENST00000579466	SPATA31C2	B4DYI2	1134 aa		11.1	□□□□□ -0.63
MSI2-208	ENST00000579466	GRM6	O15303	877 aa		11.1	□□□□□ -0.63
MSI2-208	ENST00000579466	DCX	O43602	365 aa		11.1	□□□□□ -0.63
MSI2-208	ENST00000579466	GNAT1	P11488	350 aa		11.1	□□□□□ -0.63
MSI2-208	ENST00000579466	GTF2F1	P35269	517 aa	Known RBP eCLIP	11.1	□□□□□ -0.63
MSI2-208	ENST00000579466	TCF7	P36402	384 aa	Predicted RBP	11.1	□□□□□ -0.63
MSI2-208	ENST00000579466	IGBP1	P78318	339 aa		11.1	□□□□□ -0.63
MSI2-208	ENST00000579466	ZP2	Q05996	745 aa		11.1	□□□□□ -0.63
MSI2-208	ENST00000579466	EXOC6	Q8TAG9	804 aa		11.1	□□□□□ -0.63
MSI2-208	ENST00000579466	APBB2	Q92870	758 aa		11.1	□□□□□ -0.63
MSI2-208	ENST00000579466	ZBTB10	Q96DT7	871 aa		11.1	□□□□□ -0.63
MSI2-208	ENST00000579466	IL17RA	Q96F46	866 aa		11.1	□□□□□ -0.63
MSI2-208	ENST00000579466	YTHDC1	Q96MU7	727 aa	Known RBP	11.1	□□□□□ -0.63
MSI2-208	ENST00000579466	INPP4A	Q96PE3	977 aa	Predicted RBP	11.1	□□□□□ -0.63
MSI2-208	ENST00000579466	ARIH1	Q9Y4X5	557 aa	Predicted RBP	11.1	□□□□□ -0.63
MSI2-208	ENST00000579466	FRMPD4	Q14CM0	1322 aa		11.09	□□□□□ -0.63
MSI2-208	ENST00000579466	ADGRA3	Q8IWK6	1321 aa		11.09	□□□□□ -0.63
MSI2-208	ENST00000579466	C5orf42	Q9H799	3197 aa		11.09	□□□□□ -0.63
MSI2-208	ENST00000579466	LINC01565	O15544	149 aa		11.09	□□□□□ -0.63
MSI2-208	ENST00000579466	CAND2	O75155	1236 aa		11.09	□□□□□ -0.63
MSI2-208	ENST00000579466	CHRNA1	P02708	482 aa		11.09	□□□□□ -0.63
MSI2-208	ENST00000579466	CYP21A2	P08686	494 aa		11.09	□□□□□ -0.63
MSI2-208	ENST00000579466	ICAM3	P32942	547 aa		11.09	□□□□□ -0.63
MSI2-208	ENST00000579466	PTH1R	Q03431	593 aa		11.09	□□□□□ -0.63
MSI2-208	ENST00000579466	DLX2	Q07687	328 aa	Predicted RBP	11.09	□□□□□ -0.63
MSI2-208	ENST00000579466	TRAF1	Q13077	416 aa		11.09	□□□□□ -0.63
MSI2-208	ENST00000579466	PPFIA1	Q13136	1202 aa		11.09	□□□□□ -0.63
MSI2-208	ENST00000579466	BTG3	Q14201	252 aa	Predicted RBP	11.09	□□□□□ -0.63
MSI2-208	ENST00000579466	SART3	Q15020	963 aa	Known RBP	11.09	□□□□□ -0.63
MSI2-208	ENST00000579466	PUS10	Q3MIT2	529 aa	Known RBP	11.09	□□□□□ -0.63
MSI2-208	ENST00000579466	CATIP	Q7Z7H3	387 aa		11.09	□□□□□ -0.63
MSI2-208	ENST00000579466	RAB11FIP4	Q86YS3	637 aa		11.09	□□□□□ -0.63
MSI2-208	ENST00000579466	SAMD3	Q8N6K7	520 aa		11.09	□□□□□ -0.63
MSI2-208	ENST00000579466	DNAJB3	Q8WWF6	145 aa		11.09	□□□□□ -0.63
MSI2-208	ENST00000579466	CUL5	Q93034	780 aa		11.09	□□□□□ -0.63
MSI2-208	ENST00000579466	FAM49A	Q9H0Q0	323 aa	Predicted RBP	11.09	□□□□□ -0.63
MSI2-208	ENST00000579466	ALG13	Q9NP73	1137 aa	Known RBP	11.09	□□□□□ -0.63
MSI2-208	ENST00000579466	FAM50B	Q9Y247	325 aa		11.09	□□□□□ -0.63
MSI2-208	ENST00000579466	TTC3	P53804	2025 aa		11.08	□□□□□ -0.64
MSI2-208	ENST00000579466		E7EWF7	191 aa		11.08	□□□□□ -0.64
MSI2-208	ENST00000579466	TBX10	O75333	385 aa		11.08	□□□□□ -0.64
MSI2-208	ENST00000579466	GSPT1	P15170	499 aa	Known RBP	11.08	□□□□□ -0.64
MSI2-208	ENST00000579466	RXRA	P19793	462 aa		11.08	□□□□□ -0.64
MSI2-208	ENST00000579466	IRS1	P35568	1242 aa		11.08	□□□□□ -0.64
MSI2-208	ENST00000579466	LTBR	P36941	435 aa		11.08	□□□□□ -0.64
MSI2-208	ENST00000579466	TMEM62	Q0P6H9	643 aa		11.08	□□□□□ -0.64
MSI2-208	ENST00000579466	HYAL1	Q12794	435 aa		11.08	□□□□□ -0.64
MSI2-208	ENST00000579466	TROAP	Q12815	778 aa		11.08	□□□□□ -0.64
MSI2-208	ENST00000579466	LPIN1	Q14693	890 aa		11.08	□□□□□ -0.64
MSI2-208	ENST00000579466	GRIK4	Q16099	956 aa		11.08	□□□□□ -0.64
MSI2-208	ENST00000579466	PAN2	Q504Q3	1202 aa	Known RBP	11.08	□□□□□ -0.64
MSI2-208	ENST00000579466	NLRX1	Q86UT6	975 aa		11.08	□□□□□ -0.64
MSI2-208	ENST00000579466	CMTR1	Q8N1G2	835 aa	Known RBP	11.08	□□□□□ -0.64
MSI2-208	ENST00000579466	NCOA7	Q8NI08	942 aa		11.08	□□□□□ -0.64
MSI2-208	ENST00000579466	GLG1	Q92896	1179 aa		11.08	□□□□□ -0.64
MSI2-208	ENST00000579466	RRP36	Q96EU6	259 aa	Known RBP	11.08	□□□□□ -0.64
MSI2-208	ENST00000579466	C11orf84	Q9BUA3	381 aa	Predicted RBP	11.08	□□□□□ -0.64
MSI2-208	ENST00000579466	SEC63	Q9UGP8	760 aa	Known RBP	11.08	□□□□□ -0.64
MSI2-208	ENST00000579466	MUTYH	Q9UIF7	546 aa		11.08	□□□□□ -0.64
MSI2-208	ENST00000579466	TUBE1	Q9UJT0	475 aa		11.08	□□□□□ -0.64
MSI2-208	ENST00000579466	CDY2A	Q9Y6F7	541 aa		11.08	□□□□□ -0.64
MSI2-208	ENST00000579466		U3KPZ7	1027 aa	Predicted RBP	11.08	□□□□□ -0.64
MSI2-208	ENST00000579466	PLXNA4	Q9HCM2	1894 aa		11.08	□□□□□ -0.64
MSI2-208	ENST00000579466	NRCAM	Q92823	1304 aa		11.08	□□□□□ -0.64
MSI2-208	ENST00000579466	ZNF318	Q5VUA4	2279 aa		11.07	□□□□□ -0.64
MSI2-208	ENST00000579466	hCG_1642624	A0A1W2PR95	340 aa		11.07	□□□□□ -0.64
MSI2-208	ENST00000579466	ATP9A	O75110	1047 aa		11.07	□□□□□ -0.64
MSI2-208	ENST00000579466	STAM2	O75886	525 aa		11.07	□□□□□ -0.64
MSI2-208	ENST00000579466	PLEKHA8P1	O95397	391 aa		11.07	□□□□□ -0.64
MSI2-208	ENST00000579466	CD52	P31358	61 aa		11.07	□□□□□ -0.64
MSI2-208	ENST00000579466	BMPR1A	P36894	532 aa		11.07	□□□□□ -0.64
MSI2-208	ENST00000579466	NDUFV1	P49821	464 aa		11.07	□□□□□ -0.64
MSI2-208	ENST00000579466	ANTXR2	P58335	489 aa		11.07	□□□□□ -0.64
MSI2-208	ENST00000579466	ADAM17	P78536	824 aa		11.07	□□□□□ -0.64
MSI2-208	ENST00000579466	UBE2S	Q16763	222 aa		11.07	□□□□□ -0.64
MSI2-208	ENST00000579466	FAM26D	Q5JW98	314 aa		11.07	□□□□□ -0.64
MSI2-208	ENST00000579466	TTC22	Q5TAA0	569 aa		11.07	□□□□□ -0.64
MSI2-208	ENST00000579466	PCNX4	Q63HM2	1172 aa		11.07	□□□□□ -0.64
MSI2-208	ENST00000579466	ADHFE1	Q8IWW8	467 aa		11.07	□□□□□ -0.64
MSI2-208	ENST00000579466	CTCFL	Q8NI51	663 aa	Predicted RBP	11.07	□□□□□ -0.64
MSI2-208	ENST00000579466	FBXL18	Q96ME1	805 aa		11.07	□□□□□ -0.64
MSI2-208	ENST00000579466	ENPP3	O14638	875 aa		11.06	□□□□□ -0.64
MSI2-208	ENST00000579466	MEIS2	O14770	477 aa		11.06	□□□□□ -0.64
MSI2-208	ENST00000579466	MBTPS2	O43462	519 aa		11.06	□□□□□ -0.64
MSI2-208	ENST00000579466	LINC00271	P0C7V0	271 aa		11.06	□□□□□ -0.64
MSI2-208	ENST00000579466	PDE4A	P27815	886 aa		11.06	□□□□□ -0.64
MSI2-208	ENST00000579466	MRE11	P49959	708 aa		11.06	□□□□□ -0.64
MSI2-208	ENST00000579466	GATM	P50440	423 aa		11.06	□□□□□ -0.64
MSI2-208	ENST00000579466	MGAT3	Q09327	533 aa		11.06	□□□□□ -0.64
MSI2-208	ENST00000579466	FBXO47	Q5MNV8	452 aa		11.06	□□□□□ -0.64
MSI2-208	ENST00000579466	TAF2	Q6P1X5	1199 aa		11.06	□□□□□ -0.64
MSI2-208	ENST00000579466	NFXL1	Q6ZNB6	911 aa		11.06	□□□□□ -0.64
MSI2-208	ENST00000579466	HFE2	Q6ZVN8	426 aa		11.06	□□□□□ -0.64
MSI2-208	ENST00000579466	ADGRD2	Q7Z7M1	963 aa		11.06	□□□□□ -0.64
MSI2-208	ENST00000579466	RSPH3	Q86UC2	560 aa		11.06	□□□□□ -0.64
MSI2-208	ENST00000579466	ZNF654	Q8IZM8	581 aa		11.06	□□□□□ -0.64
MSI2-208	ENST00000579466	CCDC82	Q8N4S0	544 aa		11.06	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms