RNA–Protein interactions for RNA: ENST00000579308.1

CSNK1D-210, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-210ENST00000579308 CTSHP09668 335 aa12.27□□□□□ -0.45
CSNK1D-210ENST00000579308 KCNA2P16389 499 aa12.27□□□□□ -0.45
CSNK1D-210ENST00000579308 ITGB5P18084 799 aa12.27□□□□□ -0.45
CSNK1D-210ENST00000579308 KIF5BP33176 963 aa12.27□□□□□ -0.45
CSNK1D-210ENST00000579308 ARHGAP4P98171 946 aa12.27□□□□□ -0.45
CSNK1D-210ENST00000579308 UTP14CQ5TAP6 766 aaKnown RBP12.27□□□□□ -0.45
CSNK1D-210ENST00000579308 NLRX1Q86UT6 975 aa12.27□□□□□ -0.45
CSNK1D-210ENST00000579308 FAM178BQ8IXR5 827 aa12.27□□□□□ -0.45
CSNK1D-210ENST00000579308 GIMAP8Q8ND71 665 aaPredicted RBP12.27□□□□□ -0.45
CSNK1D-210ENST00000579308 CTCFLQ8NI51 663 aaPredicted RBP12.27□□□□□ -0.45
CSNK1D-210ENST00000579308 SMARCC2Q8TAQ2 1214 aa12.27□□□□□ -0.45
CSNK1D-210ENST00000579308 NEK9Q8TD19 979 aa12.27□□□□□ -0.45
CSNK1D-210ENST00000579308 APBB2Q92870 758 aa12.27□□□□□ -0.45
CSNK1D-210ENST00000579308 YME1L1Q96TA2 773 aa12.27□□□□□ -0.45
CSNK1D-210ENST00000579308 MYL10Q9BUA6 226 aa12.27□□□□□ -0.45
CSNK1D-210ENST00000579308 EHMT1Q9H9B1 1298 aa12.27□□□□□ -0.45
CSNK1D-210ENST00000579308 ZNF215Q9UL58 517 aaPredicted RBP12.27□□□□□ -0.45
CSNK1D-210ENST00000579308 SUPT16HQ9Y5B9 1047 aaKnown RBP12.27□□□□□ -0.45
CSNK1D-210ENST00000579308 RBM8AQ9Y5S9 174 aaKnown RBP12.27□□□□□ -0.45
CSNK1D-210ENST00000579308 NRCAMQ92823 1304 aa12.27□□□□□ -0.45
CSNK1D-210ENST00000579308 BAZ2BQ9UIF8 2168 aaKnown RBP12.26□□□□□ -0.45
CSNK1D-210ENST00000579308 GSTTP1A0A1W2PQM5 241 aa12.26□□□□□ -0.45
CSNK1D-210ENST00000579308 MBLAC1A4D2B0 266 aaPredicted RBP12.26□□□□□ -0.45
CSNK1D-210ENST00000579308 SH2B2O14492 632 aaPredicted RBP12.26□□□□□ -0.45
CSNK1D-210ENST00000579308 PLEKHA8P1O95397 391 aa12.26□□□□□ -0.45
CSNK1D-210ENST00000579308 LINC00271P0C7V0 271 aa12.26□□□□□ -0.45
CSNK1D-210ENST00000579308 KCNA5P22460 613 aa12.26□□□□□ -0.45
CSNK1D-210ENST00000579308 GNAQP50148 359 aa12.26□□□□□ -0.45
CSNK1D-210ENST00000579308 MGAT3Q09327 533 aa12.26□□□□□ -0.45
CSNK1D-210ENST00000579308 PTPROQ16827 1216 aa12.26□□□□□ -0.45
CSNK1D-210ENST00000579308 MARCH8Q5T0T0 291 aa12.26□□□□□ -0.45
CSNK1D-210ENST00000579308 RUFY4Q6ZNE9 571 aa12.26□□□□□ -0.45
CSNK1D-210ENST00000579308 TMEM192Q8IY95 271 aa12.26□□□□□ -0.45
CSNK1D-210ENST00000579308 TMTC2Q8N394 836 aa12.26□□□□□ -0.45
CSNK1D-210ENST00000579308 CUL5Q93034 780 aa12.26□□□□□ -0.45
CSNK1D-210ENST00000579308 GPRASP2Q96D09 838 aa12.26□□□□□ -0.45
CSNK1D-210ENST00000579308 IFIH1Q9BYX4 1025 aaKnown RBP12.26□□□□□ -0.45
CSNK1D-210ENST00000579308 PSTPIP2Q9H939 334 aa12.26□□□□□ -0.45
CSNK1D-210ENST00000579308 UBIAD1Q9Y5Z9 338 aa12.26□□□□□ -0.45
CSNK1D-210ENST00000579308 GRXCR2A6NFK2 248 aa12.25□□□□□ -0.45
CSNK1D-210ENST00000579308 ENPP3O14638 875 aa12.25□□□□□ -0.45
CSNK1D-210ENST00000579308 PRC1O43663 620 aa12.25□□□□□ -0.45
CSNK1D-210ENST00000579308 UPP2O95045 317 aa12.25□□□□□ -0.45
CSNK1D-210ENST00000579308 TCF7P36402 384 aaPredicted RBP12.25□□□□□ -0.45
CSNK1D-210ENST00000579308 LIFRP42702 1097 aa12.25□□□□□ -0.45
CSNK1D-210ENST00000579308 SP4Q02446 784 aa12.25□□□□□ -0.45
CSNK1D-210ENST00000579308 GPM6BQ13491 265 aa12.25□□□□□ -0.45
CSNK1D-210ENST00000579308 LPIN1Q14693 890 aa12.25□□□□□ -0.45
CSNK1D-210ENST00000579308 TMEM31Q5JXX7 168 aa12.25□□□□□ -0.45
CSNK1D-210ENST00000579308 TAF2Q6P1X5 1199 aa12.25□□□□□ -0.45
CSNK1D-210ENST00000579308 GJD3Q8N144 294 aa12.25□□□□□ -0.45
CSNK1D-210ENST00000579308 CMTR1Q8N1G2 835 aaKnown RBP12.25□□□□□ -0.45
CSNK1D-210ENST00000579308 BANK1Q8NDB2 785 aa12.25□□□□□ -0.45
CSNK1D-210ENST00000579308 SEPT1Q8WYJ6 367 aa12.25□□□□□ -0.45
CSNK1D-210ENST00000579308 FAM122AQ96E09 287 aa12.25□□□□□ -0.45
CSNK1D-210ENST00000579308 IL17RAQ96F46 866 aa12.25□□□□□ -0.45
CSNK1D-210ENST00000579308 CDHR1Q96JP9 859 aa12.25□□□□□ -0.45
CSNK1D-210ENST00000579308 LSG1Q9H089 658 aaKnown RBP12.25□□□□□ -0.45
CSNK1D-210ENST00000579308 RC3H2Q9HBD1 1191 aaKnown RBP12.25□□□□□ -0.45
CSNK1D-210ENST00000579308 SEC63Q9UGP8 760 aaKnown RBP12.25□□□□□ -0.45
CSNK1D-210ENST00000579308 MYH7BA7E2Y1 1941 aa12.24□□□□□ -0.45
CSNK1D-210ENST00000579308 C5orf67F2Z3F1 127 aa12.24□□□□□ -0.45
CSNK1D-210ENST00000579308 MAFGO15525 162 aa12.24□□□□□ -0.45
CSNK1D-210ENST00000579308 MCM5P33992 734 aa12.24□□□□□ -0.45
CSNK1D-210ENST00000579308 BMPR1AP36894 532 aa12.24□□□□□ -0.45
CSNK1D-210ENST00000579308 PUS10Q3MIT2 529 aaKnown RBP12.24□□□□□ -0.45
CSNK1D-210ENST00000579308 TIGD5Q53EQ6 642 aa12.24□□□□□ -0.45
CSNK1D-210ENST00000579308 TCEAL5Q5H9L2 206 aa12.24□□□□□ -0.45
CSNK1D-210ENST00000579308 PTCRAQ6ISU1 281 aaPredicted RBP12.24□□□□□ -0.45
CSNK1D-210ENST00000579308 CASC1Q6TDU7 716 aa12.24□□□□□ -0.45
CSNK1D-210ENST00000579308 CRIPAKQ8N1N5 446 aa12.24□□□□□ -0.45
CSNK1D-210ENST00000579308 CLP1Q92989 425 aaKnown RBP12.24□□□□□ -0.45
CSNK1D-210ENST00000579308 TMEM87BQ96K49 555 aa12.24□□□□□ -0.45
CSNK1D-210ENST00000579308 JADE2Q9NQC1 790 aa12.24□□□□□ -0.45
CSNK1D-210ENST00000579308 ERAP1Q9NZ08 941 aa12.24□□□□□ -0.45
CSNK1D-210ENST00000579308 COL4A6Q14031 1691 aa12.23□□□□□ -0.45
CSNK1D-210ENST00000579308 SLC27A2O14975 620 aa12.23□□□□□ -0.45
CSNK1D-210ENST00000579308 RB1P06400 928 aa12.23□□□□□ -0.45
CSNK1D-210ENST00000579308 GHRP10912 638 aa12.23□□□□□ -0.45
CSNK1D-210ENST00000579308 IL9P15248 144 aa12.23□□□□□ -0.45
CSNK1D-210ENST00000579308 RXRAP19793 462 aa12.23□□□□□ -0.45
CSNK1D-210ENST00000579308 PPFIA1Q13136 1202 aa12.23□□□□□ -0.45
CSNK1D-210ENST00000579308 NECTIN1Q15223 517 aa12.23□□□□□ -0.45
CSNK1D-210ENST00000579308 GRIK4Q16099 956 aa12.23□□□□□ -0.45
CSNK1D-210ENST00000579308 UBE2SQ16763 222 aa12.23□□□□□ -0.45
CSNK1D-210ENST00000579308 CTC1Q2NKJ3 1217 aa12.23□□□□□ -0.45
CSNK1D-210ENST00000579308 FBXO47Q5MNV8 452 aa12.23□□□□□ -0.45
CSNK1D-210ENST00000579308 FIBCD1Q8N539 461 aa12.23□□□□□ -0.45
CSNK1D-210ENST00000579308 FANCBQ8NB91 859 aa12.23□□□□□ -0.45
CSNK1D-210ENST00000579308 ZNF689Q96CS4 500 aaPredicted RBP12.23□□□□□ -0.45
CSNK1D-210ENST00000579308 PABPC5Q96DU9 382 aaKnown RBP12.23□□□□□ -0.45
CSNK1D-210ENST00000579308 PCYT2Q99447 389 aa12.23□□□□□ -0.45
CSNK1D-210ENST00000579308 SMARCAD1Q9H4L7 1026 aa12.23□□□□□ -0.45
CSNK1D-210ENST00000579308 PCDHA6Q9UN73 950 aa12.23□□□□□ -0.45
CSNK1D-210ENST00000579308 PCDHA8Q9Y5H6 950 aa12.23□□□□□ -0.45
CSNK1D-210ENST00000579308 MYH6P13533 1939 aa12.23□□□□□ -0.45
CSNK1D-210ENST00000579308 COL4A4P53420 1690 aaPredicted RBP12.22□□□□□ -0.45
CSNK1D-210ENST00000579308 hCG_1642624A0A1W2PR95 340 aa12.22□□□□□ -0.45
CSNK1D-210ENST00000579308 POTEB3A0JP26 581 aa12.22□□□□□ -0.45
CSNK1D-210ENST00000579308 FAM86C2PA6NEL3 165 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms