RNA–Protein interactions for RNA: ENST00000579211.1

ITGB4-205, Transcript of integrin subunit beta 4, humanhuman

TSL 2

Gene ITGB4, Length 411 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-205ENST00000579211 NONOQ15233 471 aaKnown RBP eCLIP19.86■□□□□ 0.77
ITGB4-205ENST00000579211 C9orf50Q5SZB4 431 aa19.86■□□□□ 0.77
ITGB4-205ENST00000579211 KRT25Q7Z3Z0 450 aa19.86■□□□□ 0.77
ITGB4-205ENST00000579211 DAGLBQ8NCG7 672 aa19.86■□□□□ 0.77
ITGB4-205ENST00000579211 TBCKQ8TEA7 893 aa19.86■□□□□ 0.77
ITGB4-205ENST00000579211 ATP6V0A1Q93050 837 aa19.86■□□□□ 0.77
ITGB4-205ENST00000579211 SCLYQ96I15 445 aa19.86■□□□□ 0.77
ITGB4-205ENST00000579211 UIMC1Q96RL1 719 aa19.86■□□□□ 0.77
ITGB4-205ENST00000579211 SMARCAD1Q9H4L7 1026 aa19.86■□□□□ 0.77
ITGB4-205ENST00000579211 IL23AQ9NPF7 189 aa19.86■□□□□ 0.77
ITGB4-205ENST00000579211 EVPLQ92817 2033 aa19.85■□□□□ 0.77
ITGB4-205ENST00000579211 IPO5O00410 1097 aaKnown RBP19.85■□□□□ 0.77
ITGB4-205ENST00000579211 SMIM10L2AP0DMW4 78 aa19.85■□□□□ 0.77
ITGB4-205ENST00000579211 SMIM10L2BP0DMW5 78 aa19.85■□□□□ 0.77
ITGB4-205ENST00000579211 LRIT3Q3SXY7 679 aa19.85■□□□□ 0.77
ITGB4-205ENST00000579211 PSRC1Q6PGN9 363 aaPredicted RBP19.85■□□□□ 0.77
ITGB4-205ENST00000579211 TRIM50Q86XT4 487 aa19.85■□□□□ 0.77
ITGB4-205ENST00000579211 CCDC83Q8IWF9 413 aa19.85■□□□□ 0.77
ITGB4-205ENST00000579211 CAGE1Q8TC20 777 aa19.85■□□□□ 0.77
ITGB4-205ENST00000579211 TNPO1Q92973 898 aaKnown RBP19.85■□□□□ 0.77
ITGB4-205ENST00000579211 PHF20Q9BVI0 1012 aa19.85■□□□□ 0.77
ITGB4-205ENST00000579211 TBC1D22BQ9NU19 505 aa19.85■□□□□ 0.77
ITGB4-205ENST00000579211 ERAP1Q9NZ08 941 aa19.85■□□□□ 0.77
ITGB4-205ENST00000579211 TELO2Q9Y4R8 837 aa19.85■□□□□ 0.77
ITGB4-205ENST00000579211 LOXHD1Q8IVV2 1947 aa19.84■□□□□ 0.77
ITGB4-205ENST00000579211 FGBP02675 491 aa19.84■□□□□ 0.77
ITGB4-205ENST00000579211 MARK3P27448 753 aa19.84■□□□□ 0.77
ITGB4-205ENST00000579211 FOSBP53539 338 aa19.84■□□□□ 0.77
ITGB4-205ENST00000579211 EPHB4P54760 987 aa19.84■□□□□ 0.77
ITGB4-205ENST00000579211 ACTR2P61160 394 aa19.84■□□□□ 0.77
ITGB4-205ENST00000579211 PTK7Q13308 1070 aa19.84■□□□□ 0.77
ITGB4-205ENST00000579211 ITGB3BPQ13352 177 aaPredicted RBP19.84■□□□□ 0.77
ITGB4-205ENST00000579211 DEFB128Q7Z7B8 93 aa19.84■□□□□ 0.77
ITGB4-205ENST00000579211 NSUN7Q8NE18 718 aaKnown RBP19.84■□□□□ 0.77
ITGB4-205ENST00000579211 CRYGNQ8WXF5 182 aa19.84■□□□□ 0.77
ITGB4-205ENST00000579211 KIF2CQ99661 725 aa19.84■□□□□ 0.77
ITGB4-205ENST00000579211 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.84■□□□□ 0.77
ITGB4-205ENST00000579211 MTIF3Q9H2K0 278 aaKnown RBP19.84■□□□□ 0.77
ITGB4-205ENST00000579211 RNPEPQ9H4A4 650 aa19.84■□□□□ 0.77
ITGB4-205ENST00000579211 SH2B1Q9NRF2 756 aaPredicted RBP19.84■□□□□ 0.77
ITGB4-205ENST00000579211 GBF1Q92538 1859 aa19.84■□□□□ 0.77
ITGB4-205ENST00000579211 IGLV3-22A0A075B6J6 115 aa19.83■□□□□ 0.77
ITGB4-205ENST00000579211 PITPNM1O00562 1244 aa19.83■□□□□ 0.77
ITGB4-205ENST00000579211 BACH1O14867 736 aa19.83■□□□□ 0.77
ITGB4-205ENST00000579211 CIITAP33076 1130 aa19.83■□□□□ 0.77
ITGB4-205ENST00000579211 KRT2P35908 639 aa19.83■□□□□ 0.77
ITGB4-205ENST00000579211 ZNF200P98182 395 aaPredicted RBP19.83■□□□□ 0.77
ITGB4-205ENST00000579211 ZNF365Q70YC5 407 aa19.83■□□□□ 0.77
ITGB4-205ENST00000579211 FTOQ9C0B1 505 aaKnown RBP eCLIP19.83■□□□□ 0.77
ITGB4-205ENST00000579211 WNT8AQ9H1J5 351 aa19.83■□□□□ 0.77
ITGB4-205ENST00000579211 GJB4Q9NTQ9 266 aa19.83■□□□□ 0.77
ITGB4-205ENST00000579211 SETD4Q9NVD3 440 aa19.83■□□□□ 0.77
ITGB4-205ENST00000579211 SAMM50Q9Y512 469 aa19.83■□□□□ 0.77
ITGB4-205ENST00000579211 JAK2O60674 1132 aa19.82■□□□□ 0.76
ITGB4-205ENST00000579211 IQCF3P0C7M6 154 aa19.82■□□□□ 0.76
ITGB4-205ENST00000579211 FDPSP14324 419 aaKnown RBP19.82■□□□□ 0.76
ITGB4-205ENST00000579211 RFC2P35250 354 aa19.82■□□□□ 0.76
ITGB4-205ENST00000579211 STAT5BP51692 787 aa19.82■□□□□ 0.76
ITGB4-205ENST00000579211 INF2Q27J81 1249 aa19.82■□□□□ 0.76
ITGB4-205ENST00000579211 FAM160B1Q5W0V3 765 aa19.82■□□□□ 0.76
ITGB4-205ENST00000579211 MIS18BP1Q6P0N0 1132 aa19.82■□□□□ 0.76
ITGB4-205ENST00000579211 FAM184AQ8NB25 1140 aa19.82■□□□□ 0.76
ITGB4-205ENST00000579211 AFAP1L1Q8TED9 768 aa19.82■□□□□ 0.76
ITGB4-205ENST00000579211 LRCH3Q96II8 777 aa19.82■□□□□ 0.76
ITGB4-205ENST00000579211 TRPC6Q9Y210 931 aa19.82■□□□□ 0.76
ITGB4-205ENST00000579211 TET1Q8NFU7 2136 aa19.82■□□□□ 0.76
ITGB4-205ENST00000579211 EMSYQ7Z589 1322 aa19.81■□□□□ 0.76
ITGB4-205ENST00000579211 M0R2N6 131 aa19.81■□□□□ 0.76
ITGB4-205ENST00000579211 SOX1O00570 391 aaPredicted RBP19.81■□□□□ 0.76
ITGB4-205ENST00000579211 MARCH6O60337 910 aa19.81■□□□□ 0.76
ITGB4-205ENST00000579211 ACTN1P12814 892 aa19.81■□□□□ 0.76
ITGB4-205ENST00000579211 THPOP40225 353 aa19.81■□□□□ 0.76
ITGB4-205ENST00000579211 LETM2Q2VYF4 491 aa19.81■□□□□ 0.76
ITGB4-205ENST00000579211 TMEM240Q5SV17 173 aa19.81■□□□□ 0.76
ITGB4-205ENST00000579211 PIK3AP1Q6ZUJ8 805 aa19.81■□□□□ 0.76
ITGB4-205ENST00000579211 IL27Q8NEV9 243 aa19.81■□□□□ 0.76
ITGB4-205ENST00000579211 LLPHQ9BRT6 129 aaKnown RBP19.81■□□□□ 0.76
ITGB4-205ENST00000579211 NRCAMQ92823 1304 aa19.8■□□□□ 0.76
ITGB4-205ENST00000579211 ZBBXA8MT70 800 aa19.8■□□□□ 0.76
ITGB4-205ENST00000579211 TREHO43280 583 aa19.8■□□□□ 0.76
ITGB4-205ENST00000579211 PFKMP08237 780 aa19.8■□□□□ 0.76
ITGB4-205ENST00000579211 CKBP12277 381 aa19.8■□□□□ 0.76
ITGB4-205ENST00000579211 SELPP16109 830 aa19.8■□□□□ 0.76
ITGB4-205ENST00000579211 KRT76Q01546 638 aa19.8■□□□□ 0.76
ITGB4-205ENST00000579211 PPFIA1Q13136 1202 aa19.8■□□□□ 0.76
ITGB4-205ENST00000579211 SAFBQ15424 915 aaKnown RBP eCLIP19.8■□□□□ 0.76
ITGB4-205ENST00000579211 LRRC8DQ7L1W4 858 aa19.8■□□□□ 0.76
ITGB4-205ENST00000579211 C16orf59Q7L2K0 433 aa19.8■□□□□ 0.76
ITGB4-205ENST00000579211 OTOP2Q7RTS6 562 aa19.8■□□□□ 0.76
ITGB4-205ENST00000579211 NAP1L4Q99733 375 aaKnown RBP19.8■□□□□ 0.76
ITGB4-205ENST00000579211 ZNF302Q9NR11 478 aa19.8■□□□□ 0.76
ITGB4-205ENST00000579211 MSH4O15457 936 aa19.79■□□□□ 0.76
ITGB4-205ENST00000579211 GAS7O60861 476 aa19.79■□□□□ 0.76
ITGB4-205ENST00000579211 LGR5O75473 907 aa19.79■□□□□ 0.76
ITGB4-205ENST00000579211 PARNO95453 639 aaKnown RBP19.79■□□□□ 0.76
ITGB4-205ENST00000579211 PSAPP07602 524 aa19.79■□□□□ 0.76
ITGB4-205ENST00000579211 IGBP1P78318 339 aa19.79■□□□□ 0.76
ITGB4-205ENST00000579211 HMGN5P82970 282 aaKnown RBP19.79■□□□□ 0.76
ITGB4-205ENST00000579211 NPY5RQ15761 445 aa19.79■□□□□ 0.76
ITGB4-205ENST00000579211 Q4G0T1 1027 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms