RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 UMODL1Q5DID0 1318 aa16.44■□□□□ 0.22
MKS1-207ENST00000578789 EMSYQ7Z589 1322 aa16.44■□□□□ 0.22
MKS1-207ENST00000578789 ST18O60284 1047 aa16.43■□□□□ 0.22
MKS1-207ENST00000578789 CYP2C9P11712 490 aa16.43■□□□□ 0.22
MKS1-207ENST00000578789 CYP2C18P33260 490 aa16.43■□□□□ 0.22
MKS1-207ENST00000578789 CHMP4BP1P59074 171 aa16.43■□□□□ 0.22
MKS1-207ENST00000578789 NONOQ15233 471 aaKnown RBP eCLIP16.43■□□□□ 0.22
MKS1-207ENST00000578789 MOXD1Q6UVY6 613 aa16.43■□□□□ 0.22
MKS1-207ENST00000578789 TRIM50Q86XT4 487 aa16.43■□□□□ 0.22
MKS1-207ENST00000578789 WNT8AQ9H1J5 351 aa16.43■□□□□ 0.22
MKS1-207ENST00000578789 IPO5O00410 1097 aaKnown RBP16.42■□□□□ 0.22
MKS1-207ENST00000578789 PITPNM1O00562 1244 aa16.42■□□□□ 0.22
MKS1-207ENST00000578789 DHX15O43143 795 aaKnown RBP16.42■□□□□ 0.22
MKS1-207ENST00000578789 LGR5O75473 907 aa16.42■□□□□ 0.22
MKS1-207ENST00000578789 ACTR2P61160 394 aa16.42■□□□□ 0.22
MKS1-207ENST00000578789 RBL2Q08999 1139 aa16.42■□□□□ 0.22
MKS1-207ENST00000578789 PPIGQ13427 754 aaKnown RBP eCLIP16.42■□□□□ 0.224e-6■□□□□ 8.2
MKS1-207ENST00000578789 PTGISQ16647 500 aa16.42■□□□□ 0.22
MKS1-207ENST00000578789 PRR16Q569H4 304 aa16.42■□□□□ 0.22
MKS1-207ENST00000578789 UTP14CQ5TAP6 766 aaKnown RBP16.42■□□□□ 0.22
MKS1-207ENST00000578789 TMEM199Q8N511 208 aa16.42■□□□□ 0.22
MKS1-207ENST00000578789 MBOAT7Q96N66 472 aa16.42■□□□□ 0.22
MKS1-207ENST00000578789 NOD1Q9Y239 953 aa16.42■□□□□ 0.22
MKS1-207ENST00000578789 TRIP12Q14669 1992 aaPredicted RBP16.42■□□□□ 0.22
MKS1-207ENST00000578789 CYP3A7-CYP3A51PA0A087WV96 503 aa16.41■□□□□ 0.22
MKS1-207ENST00000578789 ATG7O95352 703 aa16.41■□□□□ 0.22
MKS1-207ENST00000578789 SMIM10L2AP0DMW4 78 aa16.41■□□□□ 0.22
MKS1-207ENST00000578789 SMIM10L2BP0DMW5 78 aa16.41■□□□□ 0.22
MKS1-207ENST00000578789 CYP3A7P24462 503 aa16.41■□□□□ 0.22
MKS1-207ENST00000578789 FXR1P51114 621 aaKnown RBP eCLIP16.41■□□□□ 0.22
MKS1-207ENST00000578789 EPHB4P54760 987 aa16.41■□□□□ 0.22
MKS1-207ENST00000578789 HIC1Q14526 733 aa16.41■□□□□ 0.22
MKS1-207ENST00000578789 LRIT3Q3SXY7 679 aa16.41■□□□□ 0.22
MKS1-207ENST00000578789 Q4G0T1 1027 aa16.41■□□□□ 0.22
MKS1-207ENST00000578789 CAGE1Q8TC20 777 aa16.41■□□□□ 0.22
MKS1-207ENST00000578789 OXER1Q8TDS5 423 aa16.41■□□□□ 0.22
MKS1-207ENST00000578789 DHX38Q92620 1227 aaKnown RBP16.41■□□□□ 0.22
MKS1-207ENST00000578789 TNFRSF25Q93038 417 aa16.41■□□□□ 0.22
MKS1-207ENST00000578789 PCYT2Q99447 389 aa16.41■□□□□ 0.22
MKS1-207ENST00000578789 ZNF577Q9BSK1 485 aa16.41■□□□□ 0.22
MKS1-207ENST00000578789 TBC1D22BQ9NU19 505 aa16.41■□□□□ 0.22
MKS1-207ENST00000578789 IGKV6D-21A0A0A0MT36 114 aa16.4■□□□□ 0.22
MKS1-207ENST00000578789 CCDC194A0A1B0GVG4 234 aa16.4■□□□□ 0.22
MKS1-207ENST00000578789 CCNE2O96020 404 aa16.4■□□□□ 0.22
MKS1-207ENST00000578789 MMP1P03956 469 aa16.4■□□□□ 0.22
MKS1-207ENST00000578789 CSF2RAP15509 400 aa16.4■□□□□ 0.22
MKS1-207ENST00000578789 KRT2P35908 639 aa16.4■□□□□ 0.22
MKS1-207ENST00000578789 HMGN5P82970 282 aaKnown RBP16.4■□□□□ 0.22
MKS1-207ENST00000578789 PTK7Q13308 1070 aa16.4■□□□□ 0.22
MKS1-207ENST00000578789 BFSP2Q13515 415 aa16.4■□□□□ 0.22
MKS1-207ENST00000578789 INF2Q27J81 1249 aa16.4■□□□□ 0.22
MKS1-207ENST00000578789 C9orf50Q5SZB4 431 aa16.4■□□□□ 0.22
MKS1-207ENST00000578789 CCDC155Q8N6L0 562 aa16.4■□□□□ 0.22
MKS1-207ENST00000578789 SMARCAD1Q9H4L7 1026 aa16.4■□□□□ 0.22
MKS1-207ENST00000578789 BRMS1Q9HCU9 246 aa16.4■□□□□ 0.22
MKS1-207ENST00000578789 ERAP1Q9NZ08 941 aa16.4■□□□□ 0.22
MKS1-207ENST00000578789 WDR81Q562E7 1941 aa16.4■□□□□ 0.22
MKS1-207ENST00000578789 RANBP2P49792 3224 aaKnown RBP16.4■□□□□ 0.22
MKS1-207ENST00000578789 SCN5AQ14524 2016 aa16.4■□□□□ 0.22
MKS1-207ENST00000578789 C17orf102A2RUQ5 167 aa16.39■□□□□ 0.21
MKS1-207ENST00000578789 MSH4O15457 936 aa16.39■□□□□ 0.21
MKS1-207ENST00000578789 CD2BP2O95400 341 aaKnown RBP16.39■□□□□ 0.21
MKS1-207ENST00000578789 TDP2O95551 362 aa16.39■□□□□ 0.21
MKS1-207ENST00000578789 MCM2P49736 904 aa16.39■□□□□ 0.21
MKS1-207ENST00000578789 CCL23P55773 120 aa16.39■□□□□ 0.21
MKS1-207ENST00000578789 ADAM17P78536 824 aa16.39■□□□□ 0.21
MKS1-207ENST00000578789 SHHQ15465 462 aa16.39■□□□□ 0.21
MKS1-207ENST00000578789 TRIM71Q2Q1W2 868 aaKnown RBP16.39■□□□□ 0.21
MKS1-207ENST00000578789 KRT40Q6A162 431 aa16.39■□□□□ 0.21
MKS1-207ENST00000578789 ZNF746Q6NUN9 644 aaPredicted RBP16.39■□□□□ 0.21
MKS1-207ENST00000578789 ABHD15Q6UXT9 468 aa16.39■□□□□ 0.21
MKS1-207ENST00000578789 NEK8Q86SG6 692 aa16.39■□□□□ 0.21
MKS1-207ENST00000578789 SERINC5Q86VE9 423 aa16.39■□□□□ 0.21
MKS1-207ENST00000578789 IL23AQ9NPF7 189 aa16.39■□□□□ 0.21
MKS1-207ENST00000578789 KAT6AQ92794 2004 aa16.39■□□□□ 0.21
MKS1-207ENST00000578789 DDX39AO00148 427 aaKnown RBP16.38■□□□□ 0.21
MKS1-207ENST00000578789 GCFC2P16383 781 aaKnown RBP16.38■□□□□ 0.21
MKS1-207ENST00000578789 KCNA4P22459 653 aa16.38■□□□□ 0.21
MKS1-207ENST00000578789 ZNF200P98182 395 aaPredicted RBP16.38■□□□□ 0.21
MKS1-207ENST00000578789 KRT76Q01546 638 aa16.38■□□□□ 0.21
MKS1-207ENST00000578789 NR5A1Q13285 461 aa16.38■□□□□ 0.21
MKS1-207ENST00000578789 TRIM29Q14134 588 aa16.38■□□□□ 0.21
MKS1-207ENST00000578789 EARS2Q5JPH6 523 aaKnown RBP16.38■□□□□ 0.21
MKS1-207ENST00000578789 PSRC1Q6PGN9 363 aaPredicted RBP16.38■□□□□ 0.21
MKS1-207ENST00000578789 PIK3AP1Q6ZUJ8 805 aa16.38■□□□□ 0.21
MKS1-207ENST00000578789 C16orf59Q7L2K0 433 aa16.38■□□□□ 0.21
MKS1-207ENST00000578789 PLPPR4Q7Z2D5 763 aa16.38■□□□□ 0.21
MKS1-207ENST00000578789 SMAP1Q8IYB5 467 aaPredicted RBP16.38■□□□□ 0.21
MKS1-207ENST00000578789 AFAP1L1Q8TED9 768 aa16.38■□□□□ 0.21
MKS1-207ENST00000578789 GLG1Q92896 1179 aa16.38■□□□□ 0.21
MKS1-207ENST00000578789 SLC5A5Q92911 643 aa16.38■□□□□ 0.21
MKS1-207ENST00000578789 VWCEQ96DN2 955 aa16.38■□□□□ 0.21
MKS1-207ENST00000578789 RIT2Q99578 217 aa16.38■□□□□ 0.21
MKS1-207ENST00000578789 NAP1L4Q99733 375 aaKnown RBP16.38■□□□□ 0.21
MKS1-207ENST00000578789 RNPEPQ9H4A4 650 aa16.38■□□□□ 0.21
MKS1-207ENST00000578789 AZI2Q9H6S1 392 aa16.38■□□□□ 0.21
MKS1-207ENST00000578789 NRCAMQ92823 1304 aa16.38■□□□□ 0.21
MKS1-207ENST00000578789 PFKMP08237 780 aa16.37■□□□□ 0.21
MKS1-207ENST00000578789 IQCF3P0C7M6 154 aa16.37■□□□□ 0.21
MKS1-207ENST00000578789 GNAT1P11488 350 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms