RNA–Protein interactions for RNA: ENST00000578780.2

RTTN-202, Transcript of rotatin, humanhuman

TSL 5 BASIC

Gene RTTN, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-202ENST00000578780 GOLGA8FQ08AF8 430 aa11.09□□□□□ -0.63
RTTN-202ENST00000578780 GOLGA8DPQ0D2H9 430 aa11.09□□□□□ -0.63
RTTN-202ENST00000578780 USP17L24Q0WX57 530 aa11.09□□□□□ -0.63
RTTN-202ENST00000578780 NBPF12Q5TAG4 269 aaPredicted RBP11.09□□□□□ -0.63
RTTN-202ENST00000578780 USP17L6PQ6QN14 398 aa11.09□□□□□ -0.63
RTTN-202ENST00000578780 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.09□□□□□ -0.63
RTTN-202ENST00000578780 GPC2Q8N158 579 aa11.09□□□□□ -0.63
RTTN-202ENST00000578780 OR8K1Q8NGG5 319 aa11.09□□□□□ -0.63
RTTN-202ENST00000578780 RHOXF2Q9BQY4 288 aa11.09□□□□□ -0.63
RTTN-202ENST00000578780 GPRC5DQ9NZD1 345 aa11.09□□□□□ -0.63
RTTN-202ENST00000578780 PP2D1A8MPX8 630 aa11.09□□□□□ -0.63
RTTN-202ENST00000578780 EDIL3O43854 480 aa11.09□□□□□ -0.63
RTTN-202ENST00000578780 TDP2O95551 362 aa11.09□□□□□ -0.63
RTTN-202ENST00000578780 NEFHP12036 1026 aa11.09□□□□□ -0.63
RTTN-202ENST00000578780 SARSP49591 514 aaKnown RBP11.09□□□□□ -0.63
RTTN-202ENST00000578780 NAP1L1P55209 391 aaKnown RBP11.09□□□□□ -0.63
RTTN-202ENST00000578780 CCDC40Q4G0X9 1142 aa11.09□□□□□ -0.63
RTTN-202ENST00000578780 THEMIS2Q5TEJ8 643 aa11.09□□□□□ -0.63
RTTN-202ENST00000578780 NT5DC1Q5TFE4 455 aa11.09□□□□□ -0.63
RTTN-202ENST00000578780 ANGEL2Q5VTE6 544 aaKnown RBP11.09□□□□□ -0.63
RTTN-202ENST00000578780 SH3RF1Q7Z6J0 888 aa11.09□□□□□ -0.63
RTTN-202ENST00000578780 TMEM139Q8IV31 216 aa11.09□□□□□ -0.63
RTTN-202ENST00000578780 MAGEC3Q8TD91 643 aa11.09□□□□□ -0.63
RTTN-202ENST00000578780 ZNF341Q9BYN7 854 aa11.09□□□□□ -0.63
RTTN-202ENST00000578780 SLC40A1Q9NP59 571 aa11.09□□□□□ -0.63
RTTN-202ENST00000578780 HOMER3Q9NSC5 361 aa11.09□□□□□ -0.63
RTTN-202ENST00000578780 MAN1B1Q9UKM7 699 aa11.09□□□□□ -0.63
RTTN-202ENST00000578780 ZNF232Q9UNY5 417 aa11.09□□□□□ -0.63
RTTN-202ENST00000578780 PPP1R12BO60237 982 aaPredicted RBP11.08□□□□□ -0.64
RTTN-202ENST00000578780 RPSAP08865 295 aaKnown RBP11.08□□□□□ -0.64
RTTN-202ENST00000578780 UBA7P41226 1012 aa11.08□□□□□ -0.64
RTTN-202ENST00000578780 KARSQ15046 597 aaKnown RBP11.08□□□□□ -0.64
RTTN-202ENST00000578780 CALCRLQ16602 461 aa11.08□□□□□ -0.64
RTTN-202ENST00000578780 TRPM4Q8TD43 1214 aa11.08□□□□□ -0.64
RTTN-202ENST00000578780 CHURC1Q8WUH1 139 aa11.08□□□□□ -0.64
RTTN-202ENST00000578780 GBP3Q9H0R5 595 aa11.08□□□□□ -0.64
RTTN-202ENST00000578780 CENPHQ9H3R5 247 aa11.08□□□□□ -0.64
RTTN-202ENST00000578780 CHCHD3Q9NX63 227 aaKnown RBP11.08□□□□□ -0.64
RTTN-202ENST00000578780 MEIS2O14770 477 aa11.08□□□□□ -0.64
RTTN-202ENST00000578780 SLC37A4O43826 429 aa11.08□□□□□ -0.64
RTTN-202ENST00000578780 CTNND1O60716 968 aaKnown RBP11.08□□□□□ -0.64
RTTN-202ENST00000578780 RTN3O95197 1032 aaPredicted RBP11.08□□□□□ -0.64
RTTN-202ENST00000578780 EZRP15311 586 aaKnown RBP11.08□□□□□ -0.64
RTTN-202ENST00000578780 TAL1P17542 331 aaPredicted RBP11.08□□□□□ -0.64
RTTN-202ENST00000578780 BMP6P22004 513 aa11.08□□□□□ -0.64
RTTN-202ENST00000578780 CASP1P29466 404 aa11.08□□□□□ -0.64
RTTN-202ENST00000578780 TECP42680 631 aa11.08□□□□□ -0.64
RTTN-202ENST00000578780 MAGEA8P43361 318 aa11.08□□□□□ -0.64
RTTN-202ENST00000578780 RASSF8Q8NHQ8 419 aa11.08□□□□□ -0.64
RTTN-202ENST00000578780 STAMQ92783 540 aa11.08□□□□□ -0.64
RTTN-202ENST00000578780 AK8Q96MA6 479 aa11.08□□□□□ -0.64
RTTN-202ENST00000578780 CRACR2AQ9BSW2 395 aa11.08□□□□□ -0.64
RTTN-202ENST00000578780 HPCAL4Q9UM19 191 aa11.08□□□□□ -0.64
RTTN-202ENST00000578780 PCDHGA4Q9Y5G9 962 aa11.08□□□□□ -0.64
RTTN-202ENST00000578780 KIAA0754O94854 1291 aa11.07□□□□□ -0.64
RTTN-202ENST00000578780 STAT6P42226 847 aa11.07□□□□□ -0.64
RTTN-202ENST00000578780 EPS15P42566 896 aa11.07□□□□□ -0.64
RTTN-202ENST00000578780 TXKP42681 527 aa11.07□□□□□ -0.64
RTTN-202ENST00000578780 PPFIA1Q13136 1202 aa11.07□□□□□ -0.64
RTTN-202ENST00000578780 SNCBQ16143 134 aa11.07□□□□□ -0.64
RTTN-202ENST00000578780 PRAMEF18Q5VWM3 479 aa11.07□□□□□ -0.64
RTTN-202ENST00000578780 RRAGBQ5VZM2 374 aa11.07□□□□□ -0.64
RTTN-202ENST00000578780 PPP4R3AQ6IN85 833 aa11.07□□□□□ -0.64
RTTN-202ENST00000578780 PDXDC2PQ6P474 469 aa11.07□□□□□ -0.64
RTTN-202ENST00000578780 B4GALNT4Q76KP1 1039 aa11.07□□□□□ -0.64
RTTN-202ENST00000578780 NCAPG2Q86XI2 1143 aa11.07□□□□□ -0.64
RTTN-202ENST00000578780 APOBEC3FQ8IUX4 373 aaKnown RBP11.07□□□□□ -0.64
RTTN-202ENST00000578780 FAM76AQ8TAV0 307 aa11.07□□□□□ -0.64
RTTN-202ENST00000578780 SPATA20Q8TB22 786 aa11.07□□□□□ -0.64
RTTN-202ENST00000578780 MTMR9Q96QG7 549 aa11.07□□□□□ -0.64
RTTN-202ENST00000578780 CAPS2Q9BXY5 557 aa11.07□□□□□ -0.64
RTTN-202ENST00000578780 CCSER1Q9C0I3 900 aa11.07□□□□□ -0.64
RTTN-202ENST00000578780 DISC1Q9NRI5 854 aa11.07□□□□□ -0.64
RTTN-202ENST00000578780 GOLGA6L9A6NEM1 432 aa11.07□□□□□ -0.64
RTTN-202ENST00000578780 AGPSO00116 658 aa11.07□□□□□ -0.64
RTTN-202ENST00000578780 GBP2P32456 591 aaPredicted RBP11.07□□□□□ -0.64
RTTN-202ENST00000578780 ARHGAP25P42331 645 aa11.07□□□□□ -0.64
RTTN-202ENST00000578780 DPYDQ12882 1025 aa11.07□□□□□ -0.64
RTTN-202ENST00000578780 MORC3Q14149 939 aa11.07□□□□□ -0.64
RTTN-202ENST00000578780 PDIA5Q14554 519 aa11.07□□□□□ -0.64
RTTN-202ENST00000578780 E2F5Q15329 346 aa11.07□□□□□ -0.64
RTTN-202ENST00000578780 DCAF15Q66K64 600 aa11.07□□□□□ -0.64
RTTN-202ENST00000578780 CCDC174Q6PII3 467 aa11.07□□□□□ -0.64
RTTN-202ENST00000578780 KIAA1328Q86T90 577 aa11.07□□□□□ -0.64
RTTN-202ENST00000578780 FAM160B2Q86V87 743 aa11.07□□□□□ -0.64
RTTN-202ENST00000578780 PARP9Q8IXQ6 854 aa11.07□□□□□ -0.64
RTTN-202ENST00000578780 TRIML1Q8N9V2 468 aa11.07□□□□□ -0.64
RTTN-202ENST00000578780 SYT17Q9BSW7 474 aa11.07□□□□□ -0.64
RTTN-202ENST00000578780 ANO3Q9BYT9 981 aa11.07□□□□□ -0.64
RTTN-202ENST00000578780 GINM1Q9NU53 330 aa11.07□□□□□ -0.64
RTTN-202ENST00000578780 DDX25Q9UHL0 483 aaKnown RBP11.07□□□□□ -0.64
RTTN-202ENST00000578780 CDC23Q9UJX2 597 aa11.07□□□□□ -0.64
RTTN-202ENST00000578780 FEM1BQ9UK73 627 aa11.07□□□□□ -0.64
RTTN-202ENST00000578780 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.07□□□□□ -0.64
RTTN-202ENST00000578780 ARHGAP6O43182 974 aa11.06□□□□□ -0.64
RTTN-202ENST00000578780 PLA2G6O60733 806 aa11.06□□□□□ -0.64
RTTN-202ENST00000578780 PYGBP11216 843 aa11.06□□□□□ -0.64
RTTN-202ENST00000578780 ABCD1P33897 745 aa11.06□□□□□ -0.64
RTTN-202ENST00000578780 GGCXP38435 758 aa11.06□□□□□ -0.64
RTTN-202ENST00000578780 HIRAP54198 1017 aaPredicted RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms