RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 STAT2P52630 851 aa10.32□□□□□ -0.76
CDK5RAP3-208ENST00000578525 CACNB1Q02641 598 aaPredicted RBP10.32□□□□□ -0.76
CDK5RAP3-208ENST00000578525 DLGAP5Q15398 846 aa10.32□□□□□ -0.76
CDK5RAP3-208ENST00000578525 LONRF2Q1L5Z9 754 aa10.32□□□□□ -0.76
CDK5RAP3-208ENST00000578525 ARSHQ5FYA8 562 aa10.32□□□□□ -0.76
CDK5RAP3-208ENST00000578525 CACNA2D4Q7Z3S7 1137 aa10.32□□□□□ -0.76
CDK5RAP3-208ENST00000578525 SMCR8Q8TEV9 937 aaPredicted RBP10.32□□□□□ -0.76
CDK5RAP3-208ENST00000578525 RPGRIP1Q96KN7 1286 aa10.32□□□□□ -0.76
CDK5RAP3-208ENST00000578525 PNKPQ96T60 521 aa10.32□□□□□ -0.76
CDK5RAP3-208ENST00000578525 FUT8Q9BYC5 575 aa10.32□□□□□ -0.76
CDK5RAP3-208ENST00000578525 UBXN6Q9BZV1 441 aa10.32□□□□□ -0.76
CDK5RAP3-208ENST00000578525 DEF6Q9H4E7 631 aa10.32□□□□□ -0.76
CDK5RAP3-208ENST00000578525 ZHX3Q9H4I2 956 aa10.32□□□□□ -0.76
CDK5RAP3-208ENST00000578525 SH2D4AQ9H788 454 aa10.32□□□□□ -0.76
CDK5RAP3-208ENST00000578525 EHMT1Q9H9B1 1298 aa10.32□□□□□ -0.76
CDK5RAP3-208ENST00000578525 ZBTB21Q9ULJ3 1066 aa10.32□□□□□ -0.76
CDK5RAP3-208ENST00000578525 TFR2Q9UP52 801 aa10.32□□□□□ -0.76
CDK5RAP3-208ENST00000578525 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.32□□□□□ -0.76
CDK5RAP3-208ENST00000578525 SAR1BQ9Y6B6 198 aa10.32□□□□□ -0.76
CDK5RAP3-208ENST00000578525 ATAD5Q96QE3 1844 aa10.32□□□□□ -0.76
CDK5RAP3-208ENST00000578525 KIF13BQ9NQT8 1826 aa10.31□□□□□ -0.76
CDK5RAP3-208ENST00000578525 CNTNAP1P78357 1384 aa10.31□□□□□ -0.76
CDK5RAP3-208ENST00000578525 GCOM1H8Y6P7 765 aaPredicted RBP10.31□□□□□ -0.76
CDK5RAP3-208ENST00000578525 C21orf2O43822 256 aa10.31□□□□□ -0.76
CDK5RAP3-208ENST00000578525 CALUO43852 315 aaPredicted RBP10.31□□□□□ -0.76
CDK5RAP3-208ENST00000578525 AKR1B10O60218 316 aa10.31□□□□□ -0.76
CDK5RAP3-208ENST00000578525 PLA2G6O60733 806 aa10.31□□□□□ -0.76
CDK5RAP3-208ENST00000578525 SASH3O75995 380 aa10.31□□□□□ -0.76
CDK5RAP3-208ENST00000578525 EYA4O95677 639 aa10.31□□□□□ -0.76
CDK5RAP3-208ENST00000578525 TFRCP02786 760 aaKnown RBP10.31□□□□□ -0.76
CDK5RAP3-208ENST00000578525 PLEKP08567 350 aaPredicted RBP10.31□□□□□ -0.76
CDK5RAP3-208ENST00000578525 VIL1P09327 827 aaKnown RBP10.31□□□□□ -0.76
CDK5RAP3-208ENST00000578525 POLR2MP0CAP2 368 aa10.31□□□□□ -0.76
CDK5RAP3-208ENST00000578525 GAP43P17677 238 aa10.31□□□□□ -0.76
CDK5RAP3-208ENST00000578525 RXRBP28702 533 aa10.31□□□□□ -0.76
CDK5RAP3-208ENST00000578525 HOXA13P31271 388 aaPredicted RBP10.31□□□□□ -0.76
CDK5RAP3-208ENST00000578525 MAGEA1P43355 309 aa10.31□□□□□ -0.76
CDK5RAP3-208ENST00000578525 USP14P54578 494 aa10.31□□□□□ -0.76
CDK5RAP3-208ENST00000578525 CYP27A1Q02318 531 aa10.31□□□□□ -0.76
CDK5RAP3-208ENST00000578525 PABPC4Q13310 644 aaKnown RBP eCLIP10.31□□□□□ -0.76
CDK5RAP3-208ENST00000578525 BMT2Q1RMZ1 405 aa10.31□□□□□ -0.76
CDK5RAP3-208ENST00000578525 SPDYE2Q495Y8 402 aa10.31□□□□□ -0.76
CDK5RAP3-208ENST00000578525 FAM83BQ5T0W9 1011 aa10.31□□□□□ -0.76
CDK5RAP3-208ENST00000578525 SFMBT2Q5VUG0 894 aa10.31□□□□□ -0.76
CDK5RAP3-208ENST00000578525 EPM2AIP1Q7L775 607 aaPredicted RBP10.31□□□□□ -0.76
CDK5RAP3-208ENST00000578525 FAM160B2Q86V87 743 aa10.31□□□□□ -0.76
CDK5RAP3-208ENST00000578525 SFR1Q86XK3 245 aa10.31□□□□□ -0.76
CDK5RAP3-208ENST00000578525 RTKN2Q8IZC4 609 aa10.31□□□□□ -0.76
CDK5RAP3-208ENST00000578525 TRIM58Q8NG06 486 aa10.31□□□□□ -0.76
CDK5RAP3-208ENST00000578525 ACER1Q8TDN7 264 aa10.31□□□□□ -0.76
CDK5RAP3-208ENST00000578525 CHURC1Q8WUH1 139 aa10.31□□□□□ -0.76
CDK5RAP3-208ENST00000578525 GMLQ99445 158 aa10.31□□□□□ -0.76
CDK5RAP3-208ENST00000578525 PSMD1Q99460 953 aa10.31□□□□□ -0.76
CDK5RAP3-208ENST00000578525 EIF2AK1Q9BQI3 630 aaKnown RBP10.31□□□□□ -0.76
CDK5RAP3-208ENST00000578525 REEP2Q9BRK0 252 aa10.31□□□□□ -0.76
CDK5RAP3-208ENST00000578525 IFIH1Q9BYX4 1025 aaKnown RBP10.31□□□□□ -0.76
CDK5RAP3-208ENST00000578525 ZMYND15Q9H091 742 aa10.31□□□□□ -0.76
CDK5RAP3-208ENST00000578525 RANBP17Q9H2T7 1088 aaKnown RBP10.31□□□□□ -0.76
CDK5RAP3-208ENST00000578525 TUFT1Q9NNX1 390 aa10.31□□□□□ -0.76
CDK5RAP3-208ENST00000578525 TRAF3IP3Q9Y228 551 aa10.31□□□□□ -0.76
CDK5RAP3-208ENST00000578525 MRPL11Q9Y3B7 192 aaKnown RBP10.31□□□□□ -0.76
CDK5RAP3-208ENST00000578525 IGLV3-22A0A075B6J6 115 aa10.3□□□□□ -0.76
CDK5RAP3-208ENST00000578525 CLRN2A0PK11 232 aa10.3□□□□□ -0.76
CDK5RAP3-208ENST00000578525 MACROD2A1Z1Q3 448 aa10.3□□□□□ -0.76
CDK5RAP3-208ENST00000578525 RBAK-RBAKDNI3L0D1 243 aa10.3□□□□□ -0.76
CDK5RAP3-208ENST00000578525 MEIS1O00470 390 aa10.3□□□□□ -0.76
CDK5RAP3-208ENST00000578525 PDXKO00764 312 aa10.3□□□□□ -0.76
CDK5RAP3-208ENST00000578525 ENC1O14682 589 aa10.3□□□□□ -0.76
CDK5RAP3-208ENST00000578525 MAP2K7O14733 419 aa10.3□□□□□ -0.76
CDK5RAP3-208ENST00000578525 SLC16A3O15427 465 aaKnown RBP10.3□□□□□ -0.76
CDK5RAP3-208ENST00000578525 TBC1D12O60347 775 aa10.3□□□□□ -0.76
CDK5RAP3-208ENST00000578525 TBCAO75347 108 aaKnown RBP10.3□□□□□ -0.76
CDK5RAP3-208ENST00000578525 NOL4O94818 638 aa10.3□□□□□ -0.76
CDK5RAP3-208ENST00000578525 SERPING1P05155 500 aa10.3□□□□□ -0.76
CDK5RAP3-208ENST00000578525 RHOXF2BP0C7M4 288 aa10.3□□□□□ -0.76
CDK5RAP3-208ENST00000578525 MUTP22033 750 aa10.3□□□□□ -0.76
CDK5RAP3-208ENST00000578525 MCM3P25205 808 aa10.3□□□□□ -0.76
CDK5RAP3-208ENST00000578525 ECE1P42892 770 aa10.3□□□□□ -0.76
CDK5RAP3-208ENST00000578525 PSMC6P62333 389 aa10.3□□□□□ -0.76
CDK5RAP3-208ENST00000578525 RAD51AP2Q09MP3 1159 aa10.3□□□□□ -0.76
CDK5RAP3-208ENST00000578525 ADAM9Q13443 819 aa10.3□□□□□ -0.76
CDK5RAP3-208ENST00000578525 TERF2Q15554 542 aa10.3□□□□□ -0.76
CDK5RAP3-208ENST00000578525 KNOP1Q1ED39 458 aaKnown RBP10.3□□□□□ -0.76
CDK5RAP3-208ENST00000578525 ASTE1Q2TB18 679 aaPredicted RBP10.3□□□□□ -0.76
CDK5RAP3-208ENST00000578525 SLC9C1Q4G0N8 1177 aa10.3□□□□□ -0.76
CDK5RAP3-208ENST00000578525 KIAA1755Q5JYT7 1200 aa10.3□□□□□ -0.76
CDK5RAP3-208ENST00000578525 BEND6Q5SZJ8 279 aaPredicted RBP10.3□□□□□ -0.76
CDK5RAP3-208ENST00000578525 FKBP1CQ5VVH2 108 aa10.3□□□□□ -0.76
CDK5RAP3-208ENST00000578525 HGSNATQ68CP4 663 aa10.3□□□□□ -0.76
CDK5RAP3-208ENST00000578525 WDR93Q6P2C0 686 aa10.3□□□□□ -0.76
CDK5RAP3-208ENST00000578525 AEBP2Q6ZN18 517 aaPredicted RBP10.3□□□□□ -0.76
CDK5RAP3-208ENST00000578525 KRT26Q7Z3Y9 468 aa10.3□□□□□ -0.76
CDK5RAP3-208ENST00000578525 FRMD5Q7Z6J6 570 aa10.3□□□□□ -0.76
CDK5RAP3-208ENST00000578525 SPICE1Q8N0Z3 855 aa10.3□□□□□ -0.76
CDK5RAP3-208ENST00000578525 MSL3Q8N5Y2 521 aaKnown RBP10.3□□□□□ -0.76
CDK5RAP3-208ENST00000578525 CCDC155Q8N6L0 562 aa10.3□□□□□ -0.76
CDK5RAP3-208ENST00000578525 NOA1Q8NC60 698 aaKnown RBP10.3□□□□□ -0.76
CDK5RAP3-208ENST00000578525 SLC5A5Q92911 643 aa10.3□□□□□ -0.76
CDK5RAP3-208ENST00000578525 ALS2CR12Q96Q35 445 aa10.3□□□□□ -0.76
CDK5RAP3-208ENST00000578525 RHOXF2Q9BQY4 288 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms