RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 EP400Q96L91 3159 aa12.34□□□□□ -0.43
SKA2-204ENST00000578519 FRMD3A2A2Y4 597 aa12.33□□□□□ -0.44
SKA2-204ENST00000578519 CETN3O15182 167 aa12.33□□□□□ -0.44
SKA2-204ENST00000578519 FAM13AO94988 1023 aa12.33□□□□□ -0.44
SKA2-204ENST00000578519 P4HBP07237 508 aaKnown RBP12.33□□□□□ -0.44
SKA2-204ENST00000578519 SPATA31C1P0DKV0 1188 aa12.33□□□□□ -0.44
SKA2-204ENST00000578519 JAK3P52333 1124 aa12.33□□□□□ -0.44
SKA2-204ENST00000578519 EHHADHQ08426 723 aa12.33□□□□□ -0.44
SKA2-204ENST00000578519 PABPC4Q13310 644 aaKnown RBP eCLIP12.33□□□□□ -0.44
SKA2-204ENST00000578519 ARID5BQ14865 1188 aa12.33□□□□□ -0.44
SKA2-204ENST00000578519 MAN2A1Q16706 1144 aa12.33□□□□□ -0.44
SKA2-204ENST00000578519 EDRF1Q3B7T1 1238 aa12.33□□□□□ -0.44
SKA2-204ENST00000578519 APTXQ7Z2E3 356 aaKnown RBP12.33□□□□□ -0.44
SKA2-204ENST00000578519 KCNK18Q7Z418 384 aa12.33□□□□□ -0.44
SKA2-204ENST00000578519 TPH2Q8IWU9 490 aa12.33□□□□□ -0.44
SKA2-204ENST00000578519 KIAA0895Q8NCT3 520 aa12.33□□□□□ -0.44
SKA2-204ENST00000578519 SLC17A8Q8NDX2 589 aa12.33□□□□□ -0.44
SKA2-204ENST00000578519 CHST13Q8NET6 341 aa12.33□□□□□ -0.44
SKA2-204ENST00000578519 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.33□□□□□ -0.44
SKA2-204ENST00000578519 NSUN6Q8TEA1 469 aaKnown RBP12.33□□□□□ -0.44
SKA2-204ENST00000578519 ZKSCAN4Q969J2 545 aaPredicted RBP12.33□□□□□ -0.44
SKA2-204ENST00000578519 PCMTD1Q96MG8 357 aaPredicted RBP12.33□□□□□ -0.44
SKA2-204ENST00000578519 CCDC43Q96MW1 224 aaKnown RBP12.33□□□□□ -0.44
SKA2-204ENST00000578519 RMDN3Q96TC7 470 aa12.33□□□□□ -0.44
SKA2-204ENST00000578519 P2RX7Q99572 595 aaKnown RBP12.33□□□□□ -0.44
SKA2-204ENST00000578519 HSD17B14Q9BPX1 270 aa12.33□□□□□ -0.44
SKA2-204ENST00000578519 TEX13BQ9BXU2 312 aa12.33□□□□□ -0.44
SKA2-204ENST00000578519 ZSWIM4Q9H7M6 989 aa12.33□□□□□ -0.44
SKA2-204ENST00000578519 RNF146Q9NTX7 359 aa12.33□□□□□ -0.44
SKA2-204ENST00000578519 INTS13Q9NVM9 706 aa12.33□□□□□ -0.44
SKA2-204ENST00000578519 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.33□□□□□ -0.44
SKA2-204ENST00000578519 FAM184BQ9ULE4 1060 aa12.33□□□□□ -0.44
SKA2-204ENST00000578519 ODF2LQ9ULJ1 636 aa12.33□□□□□ -0.44
SKA2-204ENST00000578519 ADAMTS5Q9UNA0 930 aa12.33□□□□□ -0.44
SKA2-204ENST00000578519 LUC7L2Q9Y383 392 aaKnown RBP12.33□□□□□ -0.44
SKA2-204ENST00000578519 AFG3L2Q9Y4W6 797 aa12.33□□□□□ -0.44
SKA2-204ENST00000578519 ASTN2O75129 1339 aaPredicted RBP12.33□□□□□ -0.44
SKA2-204ENST00000578519 ZC3H4Q9UPT8 1303 aaKnown RBP12.33□□□□□ -0.44
SKA2-204ENST00000578519 POTEFA5A3E0 1075 aa12.32□□□□□ -0.44
SKA2-204ENST00000578519 ARHGEF35A5YM69 484 aa12.32□□□□□ -0.44
SKA2-204ENST00000578519 TRIM49BA6NDI0 452 aa12.32□□□□□ -0.44
SKA2-204ENST00000578519 TRAF5O00463 557 aa12.32□□□□□ -0.44
SKA2-204ENST00000578519 CXCL11O14625 94 aa12.32□□□□□ -0.44
SKA2-204ENST00000578519 TEX33O43247 280 aa12.32□□□□□ -0.44
SKA2-204ENST00000578519 MFAP3LO75121 409 aa12.32□□□□□ -0.44
SKA2-204ENST00000578519 USP2O75604 605 aaPredicted RBP12.32□□□□□ -0.44
SKA2-204ENST00000578519 DDNO94850 711 aaPredicted RBP12.32□□□□□ -0.44
SKA2-204ENST00000578519 HMGCS2P54868 508 aa12.32□□□□□ -0.44
SKA2-204ENST00000578519 RPS6P62753 249 aaKnown RBP12.32□□□□□ -0.44
SKA2-204ENST00000578519 KRT76Q01546 638 aa12.32□□□□□ -0.44
SKA2-204ENST00000578519 RBL2Q08999 1139 aa12.32□□□□□ -0.44
SKA2-204ENST00000578519 MTMR1Q13613 665 aa12.32□□□□□ -0.44
SKA2-204ENST00000578519 ALCAMQ13740 583 aa12.32□□□□□ -0.44
SKA2-204ENST00000578519 GIT2Q14161 759 aa12.32□□□□□ -0.44
SKA2-204ENST00000578519 ECM1Q16610 540 aa12.32□□□□□ -0.44
SKA2-204ENST00000578519 GNPTABQ3T906 1256 aa12.32□□□□□ -0.44
SKA2-204ENST00000578519 CCDC40Q4G0X9 1142 aa12.32□□□□□ -0.44
SKA2-204ENST00000578519 FIGNQ5HY92 759 aa12.32□□□□□ -0.44
SKA2-204ENST00000578519 POTEEQ6S8J3 1075 aa12.32□□□□□ -0.44
SKA2-204ENST00000578519 CYP26C1Q6V0L0 522 aa12.32□□□□□ -0.44
SKA2-204ENST00000578519 NSMFQ6X4W1 530 aa12.32□□□□□ -0.44
SKA2-204ENST00000578519 ARMC9Q7Z3E5 817 aa12.32□□□□□ -0.44
SKA2-204ENST00000578519 TC2NQ8N9U0 490 aa12.32□□□□□ -0.44
SKA2-204ENST00000578519 OR8K1Q8NGG5 319 aa12.32□□□□□ -0.44
SKA2-204ENST00000578519 LRRC15Q8TF66 581 aa12.32□□□□□ -0.44
SKA2-204ENST00000578519 GPRASP2Q96D09 838 aa12.32□□□□□ -0.44
SKA2-204ENST00000578519 ATG4CQ96DT6 458 aa12.32□□□□□ -0.44
SKA2-204ENST00000578519 DYDC2Q96IM9 177 aa12.32□□□□□ -0.44
SKA2-204ENST00000578519 EDEM3Q9BZQ6 932 aa12.32□□□□□ -0.44
SKA2-204ENST00000578519 ACAD9Q9H845 621 aa12.32□□□□□ -0.44
SKA2-204ENST00000578519 KCNG1Q9UIX4 513 aa12.32□□□□□ -0.44
SKA2-204ENST00000578519 UBE4BO95155 1302 aa12.32□□□□□ -0.44
SKA2-204ENST00000578519 FRMPD4Q14CM0 1322 aa12.32□□□□□ -0.44
SKA2-204ENST00000578519 MYH7BA7E2Y1 1941 aa12.31□□□□□ -0.44
SKA2-204ENST00000578519 IQCA1LA6NCM1 817 aa12.31□□□□□ -0.44
SKA2-204ENST00000578519 NFIBO00712 420 aa12.31□□□□□ -0.44
SKA2-204ENST00000578519 EIF3DO15371 548 aaKnown RBP eCLIP12.31□□□□□ -0.44
SKA2-204ENST00000578519 SLITRK3O94933 977 aa12.31□□□□□ -0.44
SKA2-204ENST00000578519 CCDC175P0C221 793 aa12.31□□□□□ -0.44
SKA2-204ENST00000578519 HIRAP54198 1017 aaPredicted RBP12.31□□□□□ -0.44
SKA2-204ENST00000578519 ADKP55263 362 aaKnown RBP12.31□□□□□ -0.44
SKA2-204ENST00000578519 PPATQ06203 517 aa12.31□□□□□ -0.44
SKA2-204ENST00000578519 PGM5Q15124 567 aa12.31□□□□□ -0.44
SKA2-204ENST00000578519 VWA3BQ502W6 1294 aa12.31□□□□□ -0.44
SKA2-204ENST00000578519 C9orf131Q5VYM1 1079 aa12.31□□□□□ -0.44
SKA2-204ENST00000578519 SNRNP48Q6IEG0 339 aaKnown RBP12.31□□□□□ -0.44
SKA2-204ENST00000578519 ANKRD13AQ8IZ07 590 aa12.31□□□□□ -0.44
SKA2-204ENST00000578519 C17orf53Q8N3J3 647 aaPredicted RBP12.31□□□□□ -0.44
SKA2-204ENST00000578519 TXLNBQ8N3L3 684 aa12.31□□□□□ -0.44
SKA2-204ENST00000578519 PROCA1Q8NCQ7 364 aaPredicted RBP12.31□□□□□ -0.44
SKA2-204ENST00000578519 GOLGA5Q8TBA6 731 aa12.31□□□□□ -0.44
SKA2-204ENST00000578519 CPLX3Q8WVH0 158 aa12.31□□□□□ -0.44
SKA2-204ENST00000578519 C16orf45Q96MC5 204 aaPredicted RBP12.31□□□□□ -0.44
SKA2-204ENST00000578519 ERGIC2Q96RQ1 377 aa12.31□□□□□ -0.44
SKA2-204ENST00000578519 IWS1Q96ST2 819 aa12.31□□□□□ -0.44
SKA2-204ENST00000578519 SYT17Q9BSW7 474 aa12.31□□□□□ -0.44
SKA2-204ENST00000578519 NUCKS1Q9H1E3 243 aaKnown RBP12.31□□□□□ -0.44
SKA2-204ENST00000578519 BHMT2Q9H2M3 363 aa12.31□□□□□ -0.44
SKA2-204ENST00000578519 SEMA6BQ9H3T3 888 aa12.31□□□□□ -0.44
SKA2-204ENST00000578519 METTL14Q9HCE5 456 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms