RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 KIAA1024Q9UPX6 916 aa18.92■□□□□ 0.62
SREBF1-218ENST00000578469 NFE2L3Q9Y4A8 694 aa18.92■□□□□ 0.62
SREBF1-218ENST00000578469 RIPK3Q9Y572 518 aa18.92■□□□□ 0.62
SREBF1-218ENST00000578469 SYNRGQ9UMZ2 1314 aa18.92■□□□□ 0.62
SREBF1-218ENST00000578469 H0YGN5 161 aa18.91■□□□□ 0.62
SREBF1-218ENST00000578469 PSMD10O75832 226 aa18.91■□□□□ 0.62
SREBF1-218ENST00000578469 SERPINC1P01008 464 aa18.91■□□□□ 0.62
SREBF1-218ENST00000578469 CDK11BP21127 795 aaKnown RBP18.91■□□□□ 0.62
SREBF1-218ENST00000578469 FANCCQ00597 558 aa18.91■□□□□ 0.62
SREBF1-218ENST00000578469 PDE4DQ08499 809 aa18.91■□□□□ 0.62
SREBF1-218ENST00000578469 PAK1Q13153 545 aa18.91■□□□□ 0.62
SREBF1-218ENST00000578469 PPP2R5CQ13362 524 aa18.91■□□□□ 0.62
SREBF1-218ENST00000578469 TPD52L1Q16890 204 aaPredicted RBP18.91■□□□□ 0.62
SREBF1-218ENST00000578469 TREML2Q5T2D2 321 aa18.91■□□□□ 0.62
SREBF1-218ENST00000578469 UNC13DQ70J99 1090 aa18.91■□□□□ 0.62
SREBF1-218ENST00000578469 SPC24Q8NBT2 197 aa18.91■□□□□ 0.62
SREBF1-218ENST00000578469 JADE2Q9NQC1 790 aa18.91■□□□□ 0.62
SREBF1-218ENST00000578469 PXMP2Q9NR77 195 aa18.91■□□□□ 0.62
SREBF1-218ENST00000578469 FBXO40Q9UH90 709 aa18.91■□□□□ 0.62
SREBF1-218ENST00000578469 RWDD2AQ9UIY3 292 aa18.91■□□□□ 0.62
SREBF1-218ENST00000578469 DNM3Q9UQ16 869 aa18.91■□□□□ 0.62
SREBF1-218ENST00000578469 UBIAD1Q9Y5Z9 338 aa18.91■□□□□ 0.62
SREBF1-218ENST00000578469 RLFQ13129 1914 aa18.9■□□□□ 0.62
SREBF1-218ENST00000578469 POTEB3A0JP26 581 aa18.9■□□□□ 0.62
SREBF1-218ENST00000578469 MYMKA6NI61 221 aa18.9■□□□□ 0.62
SREBF1-218ENST00000578469 MED24O75448 989 aa18.9■□□□□ 0.62
SREBF1-218ENST00000578469 PLA2G4BP0C869 781 aa18.9■□□□□ 0.62
SREBF1-218ENST00000578469 ARP10275 920 aa18.9■□□□□ 0.62
SREBF1-218ENST00000578469 CD44P16070 742 aaKnown RBP18.9■□□□□ 0.62
SREBF1-218ENST00000578469 EIF2AK2P19525 551 aaKnown RBP18.9■□□□□ 0.62
SREBF1-218ENST00000578469 OSBPP22059 807 aa18.9■□□□□ 0.62
SREBF1-218ENST00000578469 PGM5Q15124 567 aa18.9■□□□□ 0.62
SREBF1-218ENST00000578469 ECM1Q16610 540 aa18.9■□□□□ 0.62
SREBF1-218ENST00000578469 POTEBQ6S5H4 581 aa18.9■□□□□ 0.62
SREBF1-218ENST00000578469 LBX2Q6XYB7 198 aa18.9■□□□□ 0.62
SREBF1-218ENST00000578469 ZSCAN30Q86W11 494 aa18.9■□□□□ 0.62
SREBF1-218ENST00000578469 TRMT44Q8IYL2 757 aaKnown RBP18.9■□□□□ 0.62
SREBF1-218ENST00000578469 SMYD4Q8IYR2 804 aaPredicted RBP18.9■□□□□ 0.62
SREBF1-218ENST00000578469 GIMAP8Q8ND71 665 aaPredicted RBP18.9■□□□□ 0.62
SREBF1-218ENST00000578469 RAET1EQ8TD07 263 aa18.9■□□□□ 0.62
SREBF1-218ENST00000578469 PDCD2LQ9BRP1 358 aa18.9■□□□□ 0.62
SREBF1-218ENST00000578469 TUFT1Q9NNX1 390 aa18.9■□□□□ 0.62
SREBF1-218ENST00000578469 IFNKQ9P0W0 207 aa18.9■□□□□ 0.62
SREBF1-218ENST00000578469 AGTPBP1Q9UPW5 1226 aa18.9■□□□□ 0.62
SREBF1-218ENST00000578469 CTNND2Q9UQB3 1225 aa18.9■□□□□ 0.62
SREBF1-218ENST00000578469 ZSWIM8A7E2V4 1837 aa18.89■□□□□ 0.61
SREBF1-218ENST00000578469 IPO5O00410 1097 aaKnown RBP18.89■□□□□ 0.61
SREBF1-218ENST00000578469 PSMA7O14818 248 aa18.89■□□□□ 0.61
SREBF1-218ENST00000578469 SSBP05455 408 aaKnown RBP eCLIP18.89■□□□□ 0.61
SREBF1-218ENST00000578469 MYCLP12524 364 aaPredicted RBP18.89■□□□□ 0.61
SREBF1-218ENST00000578469 MUTP22033 750 aa18.89■□□□□ 0.61
SREBF1-218ENST00000578469 CCND2P30279 289 aa18.89■□□□□ 0.61
SREBF1-218ENST00000578469 PSMD2Q13200 908 aa18.89■□□□□ 0.61
SREBF1-218ENST00000578469 KCNK18Q7Z418 384 aa18.89■□□□□ 0.61
SREBF1-218ENST00000578469 CATSPER3Q86XQ3 398 aa18.89■□□□□ 0.61
SREBF1-218ENST00000578469 ADSSL1Q8N142 457 aa18.89■□□□□ 0.61
SREBF1-218ENST00000578469 NSUN6Q8TEA1 469 aaKnown RBP18.89■□□□□ 0.61
SREBF1-218ENST00000578469 NELFBQ8WX92 580 aa18.89■□□□□ 0.61
SREBF1-218ENST00000578469 EIF2AK1Q9BQI3 630 aaKnown RBP18.89■□□□□ 0.61
SREBF1-218ENST00000578469 GDAQ9Y2T3 454 aa18.89■□□□□ 0.61
SREBF1-218ENST00000578469 ESPNB1AK53 854 aa18.88■□□□□ 0.61
SREBF1-218ENST00000578469 E9PMD0 336 aa18.88■□□□□ 0.61
SREBF1-218ENST00000578469 ITGB5P18084 799 aa18.88■□□□□ 0.61
SREBF1-218ENST00000578469 MSNP26038 577 aaKnown RBP18.88■□□□□ 0.61
SREBF1-218ENST00000578469 PRCPP42785 496 aa18.88■□□□□ 0.61
SREBF1-218ENST00000578469 PSMC4P43686 418 aa18.88■□□□□ 0.61
SREBF1-218ENST00000578469 STX17P56962 302 aa18.88■□□□□ 0.61
SREBF1-218ENST00000578469 UBASH3AP57075 661 aa18.88■□□□□ 0.61
SREBF1-218ENST00000578469 EPHA7Q15375 998 aa18.88■□□□□ 0.61
SREBF1-218ENST00000578469 DYMQ7RTS9 669 aa18.88■□□□□ 0.61
SREBF1-218ENST00000578469 ANKRD23Q86SG2 305 aa18.88■□□□□ 0.61
SREBF1-218ENST00000578469 NLRX1Q86UT6 975 aa18.88■□□□□ 0.61
SREBF1-218ENST00000578469 RIOX2Q8IUF8 465 aa18.88■□□□□ 0.61
SREBF1-218ENST00000578469 IL31RAQ8NI17 732 aa18.88■□□□□ 0.61
SREBF1-218ENST00000578469 NEK9Q8TD19 979 aa18.88■□□□□ 0.61
SREBF1-218ENST00000578469 DDX12PQ92771 950 aa18.88■□□□□ 0.61
SREBF1-218ENST00000578469 DPF3Q92784 378 aa18.88■□□□□ 0.61
SREBF1-218ENST00000578469 DHTKD1Q96HY7 919 aaPredicted RBP18.88■□□□□ 0.61
SREBF1-218ENST00000578469 HTATIP2Q9BUP3 242 aa18.88■□□□□ 0.61
SREBF1-218ENST00000578469 XPO4Q9C0E2 1151 aaKnown RBP18.88■□□□□ 0.61
SREBF1-218ENST00000578469 HSD3B7Q9H2F3 369 aa18.88■□□□□ 0.61
SREBF1-218ENST00000578469 KCNH7Q9NS40 1196 aa18.88■□□□□ 0.61
SREBF1-218ENST00000578469 TBC1D22BQ9NU19 505 aa18.88■□□□□ 0.61
SREBF1-218ENST00000578469 SRRDQ9UH36 339 aa18.88■□□□□ 0.61
SREBF1-218ENST00000578469 TCEAL9Q9UHQ7 104 aa18.88■□□□□ 0.61
SREBF1-218ENST00000578469 LOC285556D6RIA3 1793 aa18.88■□□□□ 0.61
SREBF1-218ENST00000578469 KRT18P05783 430 aaKnown RBP18.87■□□□□ 0.61
SREBF1-218ENST00000578469 SPATA31C1P0DKV0 1188 aa18.87■□□□□ 0.61
SREBF1-218ENST00000578469 COL11A1P12107 1806 aaPredicted RBP18.87■□□□□ 0.61
SREBF1-218ENST00000578469 IDEP14735 1019 aa18.87■□□□□ 0.61
SREBF1-218ENST00000578469 COPB2P35606 906 aa18.87■□□□□ 0.61
SREBF1-218ENST00000578469 MRPS9P82933 396 aaKnown RBP18.87■□□□□ 0.61
SREBF1-218ENST00000578469 MTMR1Q13613 665 aa18.87■□□□□ 0.61
SREBF1-218ENST00000578469 COBLL1Q53SF7 1204 aa18.87■□□□□ 0.61
SREBF1-218ENST00000578469 C17orf99Q6UX52 265 aa18.87■□□□□ 0.61
SREBF1-218ENST00000578469 CHRDL2Q6WN34 429 aa18.87■□□□□ 0.61
SREBF1-218ENST00000578469 CCDC65Q8IXS2 484 aa18.87■□□□□ 0.61
SREBF1-218ENST00000578469 ZFP91Q96JP5 570 aaPredicted RBP18.87■□□□□ 0.61
SREBF1-218ENST00000578469 AGO4Q9HCK5 861 aaKnown RBP18.87■□□□□ 0.61
SREBF1-218ENST00000578469 CYP39A1Q9NYL5 469 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms