RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 E9PMD0 336 aa20.74■□□□□ 0.91
PRKCA-203ENST00000578063 GOLGA6L19H0YKK7 550 aa20.74■□□□□ 0.91
PRKCA-203ENST00000578063 ATP9AO75110 1047 aa20.74■□□□□ 0.91
PRKCA-203ENST00000578063 PLA2G4BP0C869 781 aa20.74■□□□□ 0.91
PRKCA-203ENST00000578063 SFNP31947 248 aa20.74■□□□□ 0.91
PRKCA-203ENST00000578063 JAK3P52333 1124 aa20.74■□□□□ 0.91
PRKCA-203ENST00000578063 ASIC1P78348 528 aa20.74■□□□□ 0.91
PRKCA-203ENST00000578063 FSTL1Q12841 308 aa20.74■□□□□ 0.91
PRKCA-203ENST00000578063 DHX8Q14562 1220 aaKnown RBP20.74■□□□□ 0.91
PRKCA-203ENST00000578063 RDM1Q8NG50 284 aa20.74■□□□□ 0.91
PRKCA-203ENST00000578063 DYDC2Q96IM9 177 aa20.74■□□□□ 0.91
PRKCA-203ENST00000578063 RGL1Q9NZL6 768 aa20.74■□□□□ 0.91
PRKCA-203ENST00000578063 IVNS1ABPQ9Y6Y0 642 aa20.74■□□□□ 0.91
PRKCA-203ENST00000578063 ADGRA2Q96PE1 1338 aa20.74■□□□□ 0.91
PRKCA-203ENST00000578063 SLITRK3O94933 977 aa20.73■□□□□ 0.91
PRKCA-203ENST00000578063 KCNA2P16389 499 aa20.73■□□□□ 0.91
PRKCA-203ENST00000578063 MAPK4P31152 587 aa20.73■□□□□ 0.91
PRKCA-203ENST00000578063 TAF1CQ15572 869 aaPredicted RBP20.73■□□□□ 0.91
PRKCA-203ENST00000578063 ZNF746Q6NUN9 644 aaPredicted RBP20.73■□□□□ 0.91
PRKCA-203ENST00000578063 PAXIP1Q6ZW49 1069 aaPredicted RBP20.73■□□□□ 0.91
PRKCA-203ENST00000578063 IFNL1Q8IU54 200 aa20.73■□□□□ 0.91
PRKCA-203ENST00000578063 FGD4Q96M96 766 aa20.73■□□□□ 0.91
PRKCA-203ENST00000578063 BMP2KQ9NSY1 1161 aaPredicted RBP20.73■□□□□ 0.91
PRKCA-203ENST00000578063 MYMKA6NI61 221 aa20.73■□□□□ 0.91
PRKCA-203ENST00000578063 WDR64B1ANS9 1081 aa20.73■□□□□ 0.91
PRKCA-203ENST00000578063 KLRC4O43908 158 aa20.73■□□□□ 0.91
PRKCA-203ENST00000578063 ZNF658Q5TYW1 1059 aaPredicted RBP20.73■□□□□ 0.91
PRKCA-203ENST00000578063 DHX40Q8IX18 779 aaKnown RBP20.73■□□□□ 0.91
PRKCA-203ENST00000578063 SENP7Q9BQF6 1050 aa20.73■□□□□ 0.91
PRKCA-203ENST00000578063 PVALEFA0A1B0GWK0 134 aa20.72■□□□□ 0.91
PRKCA-203ENST00000578063 SMTNL1A8MU46 457 aa20.72■□□□□ 0.91
PRKCA-203ENST00000578063 IKBKBO14920 756 aa20.72■□□□□ 0.91
PRKCA-203ENST00000578063 RHOBTB3O94955 611 aa20.72■□□□□ 0.91
PRKCA-203ENST00000578063 P4HBP07237 508 aaKnown RBP20.72■□□□□ 0.91
PRKCA-203ENST00000578063 YY1P25490 414 aa20.72■□□□□ 0.91
PRKCA-203ENST00000578063 CTTNQ14247 550 aaKnown RBP20.72■□□□□ 0.91
PRKCA-203ENST00000578063 KMT5BQ4FZB7 885 aa20.72■□□□□ 0.91
PRKCA-203ENST00000578063 TPH2Q8IWU9 490 aa20.72■□□□□ 0.91
PRKCA-203ENST00000578063 AOPEPQ8N6M6 819 aa20.72■□□□□ 0.91
PRKCA-203ENST00000578063 MORC4Q8TE76 937 aa20.72■□□□□ 0.91
PRKCA-203ENST00000578063 LXNQ9BS40 222 aa20.72■□□□□ 0.91
PRKCA-203ENST00000578063 EXOC1Q9NV70 894 aa20.72■□□□□ 0.91
PRKCA-203ENST00000578063 SAMM50Q9Y512 469 aa20.72■□□□□ 0.91
PRKCA-203ENST00000578063 LRRC37A2A6NM11 1700 aa20.71■□□□□ 0.91
PRKCA-203ENST00000578063 ASB14A6NK59 587 aa20.71■□□□□ 0.91
PRKCA-203ENST00000578063 EYA4O95677 639 aa20.71■□□□□ 0.91
PRKCA-203ENST00000578063 SSBP05455 408 aaKnown RBP eCLIP20.71■□□□□ 0.91
PRKCA-203ENST00000578063 SLC12A3P55017 1021 aa20.71■□□□□ 0.91
PRKCA-203ENST00000578063 UNC13DQ70J99 1090 aa20.71■□□□□ 0.91
PRKCA-203ENST00000578063 GPR142Q7Z601 462 aa20.71■□□□□ 0.91
PRKCA-203ENST00000578063 SMAP1Q8IYB5 467 aaPredicted RBP20.71■□□□□ 0.91
PRKCA-203ENST00000578063 SYT2Q8N9I0 419 aaPredicted RBP20.71■□□□□ 0.91
PRKCA-203ENST00000578063 DDX12PQ92771 950 aa20.71■□□□□ 0.91
PRKCA-203ENST00000578063 NACC1Q96RE7 527 aa20.71■□□□□ 0.91
PRKCA-203ENST00000578063 JPH1Q9HDC5 661 aaPredicted RBP20.71■□□□□ 0.91
PRKCA-203ENST00000578063 ERCC5P28715 1186 aaPredicted RBP20.7■□□□□ 0.9
PRKCA-203ENST00000578063 ADORA2AP29274 412 aa20.7■□□□□ 0.9
PRKCA-203ENST00000578063 GPBP1Q86WP2 473 aa20.7■□□□□ 0.9
PRKCA-203ENST00000578063 ZSWIM4Q9H7M6 989 aa20.7■□□□□ 0.9
PRKCA-203ENST00000578063 CCNE2O96020 404 aa20.7■□□□□ 0.9
PRKCA-203ENST00000578063 TGFB3P10600 412 aa20.7■□□□□ 0.9
PRKCA-203ENST00000578063 PSMC6P62333 389 aa20.7■□□□□ 0.9
PRKCA-203ENST00000578063 TPM4P67936 248 aa20.7■□□□□ 0.9
PRKCA-203ENST00000578063 MYL5Q02045 173 aa20.7■□□□□ 0.9
PRKCA-203ENST00000578063 GRM1Q13255 1194 aa20.7■□□□□ 0.9
PRKCA-203ENST00000578063 GRB14Q14449 540 aa20.7■□□□□ 0.9
PRKCA-203ENST00000578063 ZNF792Q3KQV3 632 aa20.7■□□□□ 0.9
PRKCA-203ENST00000578063 SEPT14Q6ZU15 432 aa20.7■□□□□ 0.9
PRKCA-203ENST00000578063 PLEKHH3Q7Z736 793 aa20.7■□□□□ 0.9
PRKCA-203ENST00000578063 GIMAP8Q8ND71 665 aaPredicted RBP20.7■□□□□ 0.9
PRKCA-203ENST00000578063 SLC9A2Q9UBY0 812 aa20.7■□□□□ 0.9
PRKCA-203ENST00000578063 CPA4Q9UI42 421 aa20.7■□□□□ 0.9
PRKCA-203ENST00000578063 TLR2O60603 784 aa20.69■□□□□ 0.9
PRKCA-203ENST00000578063 LYPLA2O95372 231 aa20.69■□□□□ 0.9
PRKCA-203ENST00000578063 CYP11B2P19099 503 aa20.69■□□□□ 0.9
PRKCA-203ENST00000578063 QARSP47897 775 aaKnown RBP20.69■□□□□ 0.9
PRKCA-203ENST00000578063 KCNV1Q6PIU1 500 aa20.69■□□□□ 0.9
PRKCA-203ENST00000578063 ZNF467Q7Z7K2 595 aaPredicted RBP20.69■□□□□ 0.9
PRKCA-203ENST00000578063 ZNF784Q8NCA9 323 aaPredicted RBP20.69■□□□□ 0.9
PRKCA-203ENST00000578063 BANK1Q8NDB2 785 aa20.69■□□□□ 0.9
PRKCA-203ENST00000578063 BHMT2Q9H2M3 363 aa20.69■□□□□ 0.9
PRKCA-203ENST00000578063 ZFYVE28Q9HCC9 887 aa20.69■□□□□ 0.9
PRKCA-203ENST00000578063 PCDHA10Q9Y5I2 948 aa20.69■□□□□ 0.9
PRKCA-203ENST00000578063 PLXNB2O15031 1838 aa20.69■□□□□ 0.9
PRKCA-203ENST00000578063 TM4SF4P48230 202 aa20.68■□□□□ 0.9
PRKCA-203ENST00000578063 DYMQ7RTS9 669 aa20.68■□□□□ 0.9
PRKCA-203ENST00000578063 KRT18P05783 430 aaKnown RBP20.67■□□□□ 0.9
PRKCA-203ENST00000578063 PPP1R2P41236 205 aa20.67■□□□□ 0.9
PRKCA-203ENST00000578063 NEDD9Q14511 834 aa20.67■□□□□ 0.9
PRKCA-203ENST00000578063 DNAJC19Q96DA6 116 aa20.67■□□□□ 0.9
PRKCA-203ENST00000578063 WRAP73Q9P2S5 460 aaPredicted RBP20.67■□□□□ 0.9
PRKCA-203ENST00000578063 DIS3Q9Y2L1 958 aaKnown RBP20.67■□□□□ 0.9
PRKCA-203ENST00000578063 ZNF236Q9UL36 1845 aa20.67■□□□□ 0.9
PRKCA-203ENST00000578063 SLC15A5A6NIM6 579 aa20.67■□□□□ 0.9
PRKCA-203ENST00000578063 PPP1R3GB7ZBB8 358 aa20.67■□□□□ 0.9
PRKCA-203ENST00000578063 DKC1O60832 514 aaKnown RBP eCLIP20.67■□□□□ 0.97e-7■□□□□ 8.6
PRKCA-203ENST00000578063 COBLO75128 1261 aa20.67■□□□□ 0.9
PRKCA-203ENST00000578063 IDEP14735 1019 aa20.67■□□□□ 0.9
PRKCA-203ENST00000578063 UBA1P22314 1058 aaKnown RBP20.67■□□□□ 0.9
PRKCA-203ENST00000578063 PSMC5P62195 406 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms