RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 KRT2P35908 639 aa25.19■■□□□ 1.62
SMARCD2-206ENST00000577990 TCF7P36402 384 aaPredicted RBP25.19■■□□□ 1.62
SMARCD2-206ENST00000577990 MCM2P49736 904 aa25.19■■□□□ 1.62
SMARCD2-206ENST00000577990 FOSBP53539 338 aa25.19■■□□□ 1.62
SMARCD2-206ENST00000577990 HMGN5P82970 282 aaKnown RBP25.19■■□□□ 1.62
SMARCD2-206ENST00000577990 TRIM50Q86XT4 487 aa25.19■■□□□ 1.62
SMARCD2-206ENST00000577990 OXER1Q8TDS5 423 aa25.19■■□□□ 1.62
SMARCD2-206ENST00000577990 TUT1Q9H6E5 874 aaKnown RBP25.19■■□□□ 1.62
SMARCD2-206ENST00000577990 HDAC6Q9UBN7 1215 aa25.19■■□□□ 1.62
SMARCD2-206ENST00000577990 GTF2IRD1Q9UHL9 959 aa25.19■■□□□ 1.62
SMARCD2-206ENST00000577990 ZNF215Q9UL58 517 aaPredicted RBP25.19■■□□□ 1.62
SMARCD2-206ENST00000577990 IPO5O00410 1097 aaKnown RBP25.18■■□□□ 1.62
SMARCD2-206ENST00000577990 GDF6Q6KF10 455 aaPredicted RBP25.18■■□□□ 1.62
SMARCD2-206ENST00000577990 LENG9Q96B70 501 aa25.18■■□□□ 1.62
SMARCD2-206ENST00000577990 ZNF577Q9BSK1 485 aa25.18■■□□□ 1.62
SMARCD2-206ENST00000577990 NOC4LQ9BVI4 516 aaKnown RBP25.18■■□□□ 1.62
SMARCD2-206ENST00000577990 PPP1R12CQ9BZL4 782 aa25.18■■□□□ 1.62
SMARCD2-206ENST00000577990 HIPK3Q9H422 1215 aa25.18■■□□□ 1.62
SMARCD2-206ENST00000577990 NOD1Q9Y239 953 aa25.18■■□□□ 1.62
SMARCD2-206ENST00000577990 MMP1P03956 469 aa25.17■■□□□ 1.62
SMARCD2-206ENST00000577990 CYP2C9P11712 490 aa25.17■■□□□ 1.62
SMARCD2-206ENST00000577990 FPGSQ05932 587 aa25.17■■□□□ 1.62
SMARCD2-206ENST00000577990 PTGISQ16647 500 aa25.17■■□□□ 1.62
SMARCD2-206ENST00000577990 INF2Q27J81 1249 aa25.17■■□□□ 1.62
SMARCD2-206ENST00000577990 KRT40Q6A162 431 aa25.17■■□□□ 1.62
SMARCD2-206ENST00000577990 TMX3Q96JJ7 454 aa25.17■■□□□ 1.62
SMARCD2-206ENST00000577990 CYP3A7-CYP3A51PA0A087WV96 503 aa25.16■■□□□ 1.62
SMARCD2-206ENST00000577990 DDX39AO00148 427 aaKnown RBP25.16■■□□□ 1.62
SMARCD2-206ENST00000577990 CYP3A7P24462 503 aa25.16■■□□□ 1.62
SMARCD2-206ENST00000577990 ACTR2P61160 394 aa25.16■■□□□ 1.62
SMARCD2-206ENST00000577990 MFSD5Q6N075 450 aa25.16■■□□□ 1.62
SMARCD2-206ENST00000577990 MOXD1Q6UVY6 613 aa25.16■■□□□ 1.62
SMARCD2-206ENST00000577990 PIK3AP1Q6ZUJ8 805 aa25.16■■□□□ 1.62
SMARCD2-206ENST00000577990 UIMC1Q96RL1 719 aa25.16■■□□□ 1.62
SMARCD2-206ENST00000577990 TBC1D22BQ9NU19 505 aa25.16■■□□□ 1.62
SMARCD2-206ENST00000577990 MTMR10Q9NXD2 777 aa25.16■■□□□ 1.62
SMARCD2-206ENST00000577990 CDH23Q9H251 3354 aa25.15■■□□□ 1.62
SMARCD2-206ENST00000577990 DHX15O43143 795 aaKnown RBP25.15■■□□□ 1.62
SMARCD2-206ENST00000577990 TDP2O95551 362 aa25.15■■□□□ 1.62
SMARCD2-206ENST00000577990 CYP2C18P33260 490 aa25.15■■□□□ 1.62
SMARCD2-206ENST00000577990 NR5A1Q13285 461 aa25.15■■□□□ 1.62
SMARCD2-206ENST00000577990 Q4G0T1 1027 aa25.15■■□□□ 1.62
SMARCD2-206ENST00000577990 FAM184AQ8NB25 1140 aa25.15■■□□□ 1.62
SMARCD2-206ENST00000577990 TNFRSF25Q93038 417 aa25.15■■□□□ 1.62
SMARCD2-206ENST00000577990 C8orf76Q96K31 380 aa25.15■■□□□ 1.62
SMARCD2-206ENST00000577990 UMODL1Q5DID0 1318 aa25.14■■□□□ 1.62
SMARCD2-206ENST00000577990 EMSYQ7Z589 1322 aa25.14■■□□□ 1.62
SMARCD2-206ENST00000577990 MSH4O15457 936 aa25.14■■□□□ 1.62
SMARCD2-206ENST00000577990 LGR5O75473 907 aa25.14■■□□□ 1.62
SMARCD2-206ENST00000577990 CCNE2O96020 404 aa25.14■■□□□ 1.62
SMARCD2-206ENST00000577990 SMIM10L2AP0DMW4 78 aa25.14■■□□□ 1.62
SMARCD2-206ENST00000577990 SMIM10L2BP0DMW5 78 aa25.14■■□□□ 1.62
SMARCD2-206ENST00000577990 LETM2Q2VYF4 491 aa25.14■■□□□ 1.62
SMARCD2-206ENST00000577990 NEK8Q86SG6 692 aa25.14■■□□□ 1.62
SMARCD2-206ENST00000577990 DIS3L2Q8IYB7 885 aaKnown RBP25.14■■□□□ 1.62
SMARCD2-206ENST00000577990 GLG1Q92896 1179 aa25.14■■□□□ 1.62
SMARCD2-206ENST00000577990 FAM161BQ96MY7 647 aa25.14■■□□□ 1.62
SMARCD2-206ENST00000577990 MBOAT7Q96N66 472 aa25.14■■□□□ 1.62
SMARCD2-206ENST00000577990 CTAGE1Q96RT6 745 aa25.14■■□□□ 1.62
SMARCD2-206ENST00000577990 SMARCAD1Q9H4L7 1026 aa25.14■■□□□ 1.62
SMARCD2-206ENST00000577990 EARS2Q5JPH6 523 aaKnown RBP25.13■■□□□ 1.61
SMARCD2-206ENST00000577990 TMEM199Q8N511 208 aa25.13■■□□□ 1.61
SMARCD2-206ENST00000577990 RNPC3Q96LT9 517 aaKnown RBP25.13■■□□□ 1.61
SMARCD2-206ENST00000577990 PCYT2Q99447 389 aa25.13■■□□□ 1.61
SMARCD2-206ENST00000577990 AZI2Q9H6S1 392 aa25.13■■□□□ 1.61
SMARCD2-206ENST00000577990 ERAP1Q9NZ08 941 aa25.13■■□□□ 1.61
SMARCD2-206ENST00000577990 TCEAL9Q9UHQ7 104 aa25.13■■□□□ 1.61
SMARCD2-206ENST00000577990 C17orf102A2RUQ5 167 aa25.12■■□□□ 1.61
SMARCD2-206ENST00000577990 BTBD18B2RXH4 712 aa25.12■■□□□ 1.61
SMARCD2-206ENST00000577990 ATG7O95352 703 aa25.12■■□□□ 1.61
SMARCD2-206ENST00000577990 HOXC8P31273 242 aa25.12■■□□□ 1.61
SMARCD2-206ENST00000577990 GUCY1B3Q02153 619 aa25.12■■□□□ 1.61
SMARCD2-206ENST00000577990 PPIGQ13427 754 aaKnown RBP eCLIP25.12■■□□□ 1.61
SMARCD2-206ENST00000577990 SAFBQ15424 915 aaKnown RBP eCLIP25.12■■□□□ 1.61
SMARCD2-206ENST00000577990 SLC5A5Q92911 643 aa25.12■■□□□ 1.61
SMARCD2-206ENST00000577990 NAP1L4Q99733 375 aaKnown RBP25.12■■□□□ 1.61
SMARCD2-206ENST00000577990 WNT8AQ9H1J5 351 aa25.12■■□□□ 1.61
SMARCD2-206ENST00000577990 DDX25Q9UHL0 483 aaKnown RBP25.12■■□□□ 1.61
SMARCD2-206ENST00000577990 TRIP12Q14669 1992 aaPredicted RBP25.11■■□□□ 1.61
SMARCD2-206ENST00000577990 FAM205CA6NFA0 338 aa25.11■■□□□ 1.61
SMARCD2-206ENST00000577990 GCFC2P16383 781 aaKnown RBP25.11■■□□□ 1.61
SMARCD2-206ENST00000577990 MARK3P27448 753 aa25.11■■□□□ 1.61
SMARCD2-206ENST00000577990 CCL23P55773 120 aa25.11■■□□□ 1.61
SMARCD2-206ENST00000577990 ZNF200P98182 395 aaPredicted RBP25.11■■□□□ 1.61
SMARCD2-206ENST00000577990 KRT76Q01546 638 aa25.11■■□□□ 1.61
SMARCD2-206ENST00000577990 BFSP2Q13515 415 aa25.11■■□□□ 1.61
SMARCD2-206ENST00000577990 HIC1Q14526 733 aa25.11■■□□□ 1.61
SMARCD2-206ENST00000577990 ZNF746Q6NUN9 644 aaPredicted RBP25.11■■□□□ 1.61
SMARCD2-206ENST00000577990 ABHD15Q6UXT9 468 aa25.11■■□□□ 1.61
SMARCD2-206ENST00000577990 CCDC155Q8N6L0 562 aa25.11■■□□□ 1.61
SMARCD2-206ENST00000577990 RIT2Q99578 217 aa25.11■■□□□ 1.61
SMARCD2-206ENST00000577990 RNPEPQ9H4A4 650 aa25.11■■□□□ 1.61
SMARCD2-206ENST00000577990 PITPNM1O00562 1244 aa25.1■■□□□ 1.61
SMARCD2-206ENST00000577990 CSF2RAP15509 400 aa25.1■■□□□ 1.61
SMARCD2-206ENST00000577990 PTK7Q13308 1070 aa25.1■■□□□ 1.61
SMARCD2-206ENST00000577990 PPP4R3AQ6IN85 833 aa25.1■■□□□ 1.61
SMARCD2-206ENST00000577990 MIS18BP1Q6P0N0 1132 aa25.1■■□□□ 1.61
SMARCD2-206ENST00000577990 PLPPR4Q7Z2D5 763 aa25.1■■□□□ 1.61
SMARCD2-206ENST00000577990 SMAP1Q8IYB5 467 aaPredicted RBP25.1■■□□□ 1.61
SMARCD2-206ENST00000577990 CAGE1Q8TC20 777 aa25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms