RNA–Protein interactions for RNA: ENST00000577940.6

DDX42-204, Transcript of DEAD-box helicase 42, humanhuman

TSL 5

Gene DDX42, Length 1,427 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-204ENST00000577940 PLEKHA8P1O95397 391 aa9.55□□□□□ -0.88
DDX42-204ENST00000577940 LGALS2P05162 132 aa9.55□□□□□ -0.88
DDX42-204ENST00000577940 RSPH10BP0C881 870 aa9.55□□□□□ -0.88
DDX42-204ENST00000577940 MYOGP15173 224 aa9.55□□□□□ -0.88
DDX42-204ENST00000577940 THPOP40225 353 aa9.55□□□□□ -0.88
DDX42-204ENST00000577940 APOBRQ0VD83 1088 aa9.55□□□□□ -0.88
DDX42-204ENST00000577940 CPLX2Q6PUV4 134 aaKnown RBP9.55□□□□□ -0.88
DDX42-204ENST00000577940 TMTC3Q6ZXV5 915 aa9.55□□□□□ -0.88
DDX42-204ENST00000577940 HEATR3Q7Z4Q2 680 aa9.55□□□□□ -0.88
DDX42-204ENST00000577940 SERINC5Q86VE9 423 aa9.55□□□□□ -0.88
DDX42-204ENST00000577940 MICU3Q86XE3 530 aa9.55□□□□□ -0.88
DDX42-204ENST00000577940 CMTR1Q8N1G2 835 aaKnown RBP9.55□□□□□ -0.88
DDX42-204ENST00000577940 CCDC82Q8N4S0 544 aa9.55□□□□□ -0.88
DDX42-204ENST00000577940 SPRYD3Q8NCJ5 442 aa9.55□□□□□ -0.88
DDX42-204ENST00000577940 ATXN2LQ8WWM7 1075 aaKnown RBP9.55□□□□□ -0.88
DDX42-204ENST00000577940 PPM1EQ8WY54 764 aa9.55□□□□□ -0.88
DDX42-204ENST00000577940 DHX38Q92620 1227 aaKnown RBP9.55□□□□□ -0.88
DDX42-204ENST00000577940 ZFP91Q96JP5 570 aaPredicted RBP9.55□□□□□ -0.88
DDX42-204ENST00000577940 GPR20Q99678 358 aa9.55□□□□□ -0.88
DDX42-204ENST00000577940 GLT8D2Q9H1C3 349 aa9.55□□□□□ -0.88
DDX42-204ENST00000577940 TPCN1Q9ULQ1 816 aa9.55□□□□□ -0.88
DDX42-204ENST00000577940 COL6A3P12111 3177 aa9.54□□□□□ -0.88
DDX42-204ENST00000577940 KLF18A0A0U1RQI7 1052 aa9.54□□□□□ -0.88
DDX42-204ENST00000577940 CCDC196A0A1B0GTZ2 297 aa9.54□□□□□ -0.88
DDX42-204ENST00000577940 hCG_1984214I3L0E3 225 aa9.54□□□□□ -0.88
DDX42-204ENST00000577940 ZBTB43O43298 467 aa9.54□□□□□ -0.88
DDX42-204ENST00000577940 LGR5O75473 907 aa9.54□□□□□ -0.88
DDX42-204ENST00000577940 FOSP01100 380 aaPredicted RBP9.54□□□□□ -0.88
DDX42-204ENST00000577940 CA3P07451 260 aa9.54□□□□□ -0.88
DDX42-204ENST00000577940 SMIM10L2AP0DMW4 78 aa9.54□□□□□ -0.88
DDX42-204ENST00000577940 SMIM10L2BP0DMW5 78 aa9.54□□□□□ -0.88
DDX42-204ENST00000577940 PDIA4P13667 645 aaKnown RBP9.54□□□□□ -0.88
DDX42-204ENST00000577940 RXRAP19793 462 aa9.54□□□□□ -0.88
DDX42-204ENST00000577940 RCAN1P53805 252 aa9.54□□□□□ -0.88
DDX42-204ENST00000577940 EVCP57679 992 aa9.54□□□□□ -0.88
DDX42-204ENST00000577940 ZNF200P98182 395 aaPredicted RBP9.54□□□□□ -0.88
DDX42-204ENST00000577940 STK3Q13188 491 aa9.54□□□□□ -0.88
DDX42-204ENST00000577940 CUL4AQ13619 759 aa9.54□□□□□ -0.88
DDX42-204ENST00000577940 RTN1Q16799 776 aa9.54□□□□□ -0.88
DDX42-204ENST00000577940 TJAP1Q5JTD0 557 aa9.54□□□□□ -0.88
DDX42-204ENST00000577940 ZNF618Q5T7W0 954 aa9.54□□□□□ -0.88
DDX42-204ENST00000577940 ZNF713Q8N859 430 aaPredicted RBP9.54□□□□□ -0.88
DDX42-204ENST00000577940 GPKOWQ92917 476 aaPredicted RBP eCLIP9.54□□□□□ -0.882e-6■■■□□ 18.7
DDX42-204ENST00000577940 TNPO1Q92973 898 aaKnown RBP9.54□□□□□ -0.88
DDX42-204ENST00000577940 LARP6Q9BRS8 491 aaKnown RBP9.54□□□□□ -0.88
DDX42-204ENST00000577940 RNPEPQ9H4A4 650 aa9.54□□□□□ -0.88
DDX42-204ENST00000577940 SMC3Q9UQE7 1217 aa9.54□□□□□ -0.88
DDX42-204ENST00000577940 KIF3AQ9Y496 699 aa9.54□□□□□ -0.88
DDX42-204ENST00000577940 NRCAMQ92823 1304 aa9.53□□□□□ -0.88
DDX42-204ENST00000577940 GOLGA8BA8MQT2 603 aa9.53□□□□□ -0.88
DDX42-204ENST00000577940 CPLX1O14810 134 aa9.53□□□□□ -0.88
DDX42-204ENST00000577940 PFKFB2O60825 505 aa9.53□□□□□ -0.88
DDX42-204ENST00000577940 NBNO60934 754 aa9.53□□□□□ -0.88
DDX42-204ENST00000577940 CDKL5O76039 1030 aa9.53□□□□□ -0.88
DDX42-204ENST00000577940 POU3F3P20264 500 aaPredicted RBP9.53□□□□□ -0.88
DDX42-204ENST00000577940 PDIA3P30101 505 aaKnown RBP9.53□□□□□ -0.88
DDX42-204ENST00000577940 METAP2P50579 478 aaKnown RBP eCLIP9.53□□□□□ -0.88
DDX42-204ENST00000577940 WDR5P61964 334 aaKnown RBP9.53□□□□□ -0.88
DDX42-204ENST00000577940 MTMR1Q13613 665 aa9.53□□□□□ -0.88
DDX42-204ENST00000577940 ADGRE1Q14246 886 aa9.53□□□□□ -0.88
DDX42-204ENST00000577940 GPNMBQ14956 572 aa9.53□□□□□ -0.88
DDX42-204ENST00000577940 CCDC85BQ15834 202 aaPredicted RBP9.53□□□□□ -0.88
DDX42-204ENST00000577940 ME3Q16798 604 aa9.53□□□□□ -0.88
DDX42-204ENST00000577940 TRIM71Q2Q1W2 868 aaKnown RBP9.53□□□□□ -0.88
DDX42-204ENST00000577940 UTP14CQ5TAP6 766 aaKnown RBP9.53□□□□□ -0.88
DDX42-204ENST00000577940 PPP1R18Q6NYC8 613 aa9.53□□□□□ -0.88
DDX42-204ENST00000577940 APOA5Q6Q788 366 aa9.53□□□□□ -0.88
DDX42-204ENST00000577940 CCDC83Q8IWF9 413 aa9.53□□□□□ -0.88
DDX42-204ENST00000577940 SEPT1Q8WYJ6 367 aa9.53□□□□□ -0.88
DDX42-204ENST00000577940 RAD9AQ99638 391 aa9.53□□□□□ -0.88
DDX42-204ENST00000577940 LLPHQ9BRT6 129 aaKnown RBP9.53□□□□□ -0.88
DDX42-204ENST00000577940 PCDHA6Q9UN73 950 aa9.53□□□□□ -0.88
DDX42-204ENST00000577940 PCDHA8Q9Y5H6 950 aa9.53□□□□□ -0.88
DDX42-204ENST00000577940 V9GY48 417 aaPredicted RBP9.53□□□□□ -0.88
DDX42-204ENST00000577940 LAMA4Q16363 1823 aa9.53□□□□□ -0.88
DDX42-204ENST00000577940 LAMA2P24043 3122 aaKnown RBP9.52□□□□□ -0.88
DDX42-204ENST00000577940 hCG_1642624A0A1W2PR95 340 aa9.52□□□□□ -0.89
DDX42-204ENST00000577940 GJB5O95377 273 aa9.52□□□□□ -0.89
DDX42-204ENST00000577940 AMHP03971 560 aa9.52□□□□□ -0.89
DDX42-204ENST00000577940 RPLP2P05387 115 aaKnown RBP9.52□□□□□ -0.89
DDX42-204ENST00000577940 HOXC8P31273 242 aa9.52□□□□□ -0.89
DDX42-204ENST00000577940 NAPAP54920 295 aa9.52□□□□□ -0.89
DDX42-204ENST00000577940 MRPS5P82675 430 aaKnown RBP9.52□□□□□ -0.89
DDX42-204ENST00000577940 SP4Q02446 784 aa9.52□□□□□ -0.89
DDX42-204ENST00000577940 TAP1Q03518 808 aa9.52□□□□□ -0.89
DDX42-204ENST00000577940 SEMA3FQ13275 785 aa9.52□□□□□ -0.89
DDX42-204ENST00000577940 AAK1Q2M2I8 961 aa9.52□□□□□ -0.89
DDX42-204ENST00000577940 TAF2Q6P1X5 1199 aa9.52□□□□□ -0.89
DDX42-204ENST00000577940 RSPH3Q86UC2 560 aa9.52□□□□□ -0.89
DDX42-204ENST00000577940 RAB11FIP4Q86YS3 637 aa9.52□□□□□ -0.89
DDX42-204ENST00000577940 USP38Q8NB14 1042 aa9.52□□□□□ -0.89
DDX42-204ENST00000577940 ARNTL2Q8WYA1 636 aa9.52□□□□□ -0.89
DDX42-204ENST00000577940 SEPT8Q92599 483 aa9.52□□□□□ -0.89
DDX42-204ENST00000577940 GLG1Q92896 1179 aa9.52□□□□□ -0.89
DDX42-204ENST00000577940 GTF3C6Q969F1 213 aa9.52□□□□□ -0.89
DDX42-204ENST00000577940 SMARCAD1Q9H4L7 1026 aa9.52□□□□□ -0.89
DDX42-204ENST00000577940 BCAS3Q9H6U6 928 aa9.52□□□□□ -0.89
DDX42-204ENST00000577940 RIC8AQ9NPQ8 531 aa9.52□□□□□ -0.89
DDX42-204ENST00000577940 JADE2Q9NQC1 790 aa9.52□□□□□ -0.89
DDX42-204ENST00000577940 SETD4Q9NVD3 440 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms