RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 SERINC5Q86VE9 423 aa18.4■□□□□ 0.54
VAPA-204ENST00000577901 CCDC82Q8N4S0 544 aa18.4■□□□□ 0.54
VAPA-204ENST00000577901 ZFP91Q96JP5 570 aaPredicted RBP18.4■□□□□ 0.54
VAPA-204ENST00000577901 C16orf70Q9BSU1 422 aa18.4■□□□□ 0.54
VAPA-204ENST00000577901 MLXIPQ9HAP2 919 aa18.4■□□□□ 0.54
VAPA-204ENST00000577901 EMSYQ7Z589 1322 aa18.4■□□□□ 0.54
VAPA-204ENST00000577901 APOBRQ0VD83 1088 aa18.39■□□□□ 0.53
VAPA-204ENST00000577901 FCHSD1Q86WN1 690 aa18.39■□□□□ 0.53
VAPA-204ENST00000577901 GPKOWQ92917 476 aaPredicted RBP eCLIP18.39■□□□□ 0.531e-7■■□□□ 14.2
VAPA-204ENST00000577901 AGXT2Q9BYV1 514 aa18.39■□□□□ 0.53
VAPA-204ENST00000577901 RSPH10B2B2RC85 870 aa18.38■□□□□ 0.53
VAPA-204ENST00000577901 AMHP03971 560 aa18.38■□□□□ 0.53
VAPA-204ENST00000577901 RSPH10BP0C881 870 aa18.38■□□□□ 0.53
VAPA-204ENST00000577901 METAP2P50579 478 aaKnown RBP eCLIP18.38■□□□□ 0.53
VAPA-204ENST00000577901 ANAPC15P60006 121 aa18.38■□□□□ 0.53
VAPA-204ENST00000577901 DBF4BQ8NFT6 615 aa18.38■□□□□ 0.53
VAPA-204ENST00000577901 EPHX3Q9H6B9 360 aa18.38■□□□□ 0.53
VAPA-204ENST00000577901 INSL6Q9Y581 213 aa18.38■□□□□ 0.53
VAPA-204ENST00000577901 NCOR1O75376 2440 aa18.37■□□□□ 0.53
VAPA-204ENST00000577901 C17orf102A2RUQ5 167 aa18.37■□□□□ 0.53
VAPA-204ENST00000577901 H3BRB1 525 aa18.37■□□□□ 0.53
VAPA-204ENST00000577901 PLA2G5P39877 138 aa18.37■□□□□ 0.53
VAPA-204ENST00000577901 MYOCDQ8IZQ8 938 aa18.37■□□□□ 0.53
VAPA-204ENST00000577901 ATP6V0A1Q93050 837 aa18.37■□□□□ 0.53
VAPA-204ENST00000577901 TUT1Q9H6E5 874 aaKnown RBP18.37■□□□□ 0.53
VAPA-204ENST00000577901 MYH7BA7E2Y1 1941 aa18.37■□□□□ 0.53
VAPA-204ENST00000577901 NOP56O00567 594 aaKnown RBP18.36■□□□□ 0.53
VAPA-204ENST00000577901 LGALS2P05162 132 aa18.36■□□□□ 0.53
VAPA-204ENST00000577901 SMIM10L2AP0DMW4 78 aa18.36■□□□□ 0.53
VAPA-204ENST00000577901 SMIM10L2BP0DMW5 78 aa18.36■□□□□ 0.53
VAPA-204ENST00000577901 MKRN4PQ13434 485 aaPredicted RBP18.36■□□□□ 0.53
VAPA-204ENST00000577901 GNPTABQ3T906 1256 aa18.36■□□□□ 0.53
VAPA-204ENST00000577901 PLEKHG4Q58EX7 1191 aa18.36■□□□□ 0.53
VAPA-204ENST00000577901 FBXO22Q8NEZ5 403 aa18.36■□□□□ 0.53
VAPA-204ENST00000577901 CUL5Q93034 780 aa18.36■□□□□ 0.53
VAPA-204ENST00000577901 FAM122AQ96E09 287 aa18.36■□□□□ 0.53
VAPA-204ENST00000577901 C17orf80Q9BSJ5 609 aa18.36■□□□□ 0.53
VAPA-204ENST00000577901 UPF3BQ9BZI7 483 aaKnown RBP18.36■□□□□ 0.53
VAPA-204ENST00000577901 BCAS3Q9H6U6 928 aa18.36■□□□□ 0.53
VAPA-204ENST00000577901 PDRG1Q9NUG6 133 aa18.36■□□□□ 0.53
VAPA-204ENST00000577901 BAZ2BQ9UIF8 2168 aaKnown RBP18.35■□□□□ 0.53
VAPA-204ENST00000577901 hCG_1642624A0A1W2PR95 340 aa18.35■□□□□ 0.53
VAPA-204ENST00000577901 TREHO43280 583 aa18.35■□□□□ 0.53
VAPA-204ENST00000577901 CDC27P30260 824 aa18.35■□□□□ 0.53
VAPA-204ENST00000577901 HOXC8P31273 242 aa18.35■□□□□ 0.53
VAPA-204ENST00000577901 EVCP57679 992 aa18.35■□□□□ 0.53
VAPA-204ENST00000577901 MRPS9P82933 396 aaKnown RBP18.35■□□□□ 0.53
VAPA-204ENST00000577901 HTRA4P83105 476 aaPredicted RBP18.35■□□□□ 0.53
VAPA-204ENST00000577901 UBE2ZQ9H832 354 aaPredicted RBP18.35■□□□□ 0.53
VAPA-204ENST00000577901 FAM217BQ9NTX9 383 aaPredicted RBP18.35■□□□□ 0.53
VAPA-204ENST00000577901 V9GY48 417 aaPredicted RBP18.35■□□□□ 0.53
VAPA-204ENST00000577901 FRMPD4Q14CM0 1322 aa18.34■□□□□ 0.53
VAPA-204ENST00000577901 CNTNAP5Q8WYK1 1306 aa18.34■□□□□ 0.53
VAPA-204ENST00000577901 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.34■□□□□ 0.53
VAPA-204ENST00000577901 STAM2O75886 525 aa18.34■□□□□ 0.53
VAPA-204ENST00000577901 ICAM3P32942 547 aa18.34■□□□□ 0.53
VAPA-204ENST00000577901 ADD1P35611 737 aaKnown RBP18.34■□□□□ 0.53
VAPA-204ENST00000577901 METTL7BQ6UX53 244 aa18.34■□□□□ 0.53
VAPA-204ENST00000577901 HEATR3Q7Z4Q2 680 aa18.34■□□□□ 0.53
VAPA-204ENST00000577901 SMARCC2Q8TAQ2 1214 aa18.34■□□□□ 0.53
VAPA-204ENST00000577901 SP7Q8TDD2 431 aaPredicted RBP18.34■□□□□ 0.53
VAPA-204ENST00000577901 SEPT8Q92599 483 aa18.34■□□□□ 0.53
VAPA-204ENST00000577901 LRFN3Q9BTN0 628 aa18.34■□□□□ 0.53
VAPA-204ENST00000577901 RNPEPQ9H4A4 650 aa18.34■□□□□ 0.53
VAPA-204ENST00000577901 PSTPIP2Q9H939 334 aa18.34■□□□□ 0.53
VAPA-204ENST00000577901 SIP14410 1827 aa18.34■□□□□ 0.53
VAPA-204ENST00000577901 SPATA31C2B4DYI2 1134 aa18.33■□□□□ 0.52
VAPA-204ENST00000577901 PIK3CDO00329 1044 aa18.33■□□□□ 0.52
VAPA-204ENST00000577901 CAND2O75155 1236 aa18.33■□□□□ 0.52
VAPA-204ENST00000577901 SEC24BO95487 1268 aa18.33■□□□□ 0.52
VAPA-204ENST00000577901 CTSHP09668 335 aa18.33■□□□□ 0.52
VAPA-204ENST00000577901 GNAT1P11488 350 aa18.33■□□□□ 0.52
VAPA-204ENST00000577901 PDIA3P30101 505 aaKnown RBP18.33■□□□□ 0.52
VAPA-204ENST00000577901 FUT2Q10981 343 aa18.33■□□□□ 0.52
VAPA-204ENST00000577901 TOB2Q14106 344 aaPredicted RBP18.33■□□□□ 0.52
VAPA-204ENST00000577901 NEDD9Q14511 834 aa18.33■□□□□ 0.52
VAPA-204ENST00000577901 TMEM31Q5JXX7 168 aa18.33■□□□□ 0.52
VAPA-204ENST00000577901 CYFIP1Q7L576 1253 aa18.33■□□□□ 0.52
VAPA-204ENST00000577901 KHSRPQ92945 711 aaKnown RBP eCLIP18.33■□□□□ 0.521e-8■■■■□ 19.6
VAPA-204ENST00000577901 INPP4AQ96PE3 977 aaPredicted RBP18.33■□□□□ 0.52
VAPA-204ENST00000577901 GPR20Q99678 358 aa18.33■□□□□ 0.52
VAPA-204ENST00000577901 RTEL1Q9NZ71 1219 aa18.33■□□□□ 0.52
VAPA-204ENST00000577901 NID2Q14112 1375 aa18.32■□□□□ 0.52
VAPA-204ENST00000577901 hCG_1984214I3L0E3 225 aa18.32■□□□□ 0.52
VAPA-204ENST00000577901 FIBPO43427 364 aa18.32■□□□□ 0.52
VAPA-204ENST00000577901 KCNA5P22460 613 aa18.32■□□□□ 0.52
VAPA-204ENST00000577901 AKAP17AQ02040 695 aaKnown RBP18.32■□□□□ 0.52
VAPA-204ENST00000577901 SEMA3FQ13275 785 aa18.32■□□□□ 0.52
VAPA-204ENST00000577901 LEXMQ3ZCV2 418 aa18.32■□□□□ 0.52
VAPA-204ENST00000577901 EPC2Q52LR7 807 aa18.32■□□□□ 0.52
VAPA-204ENST00000577901 ZNF713Q8N859 430 aaPredicted RBP18.32■□□□□ 0.52
VAPA-204ENST00000577901 TOP1MTQ969P6 601 aa18.32■□□□□ 0.52
VAPA-204ENST00000577901 ZNF274Q96GC6 653 aaPredicted RBP18.32■□□□□ 0.52
VAPA-204ENST00000577901 SAMD11Q96NU1 681 aa18.32■□□□□ 0.52
VAPA-204ENST00000577901 YME1L1Q96TA2 773 aa18.32■□□□□ 0.52
VAPA-204ENST00000577901 OSBPL7Q9BZF2 842 aa18.32■□□□□ 0.52
VAPA-204ENST00000577901 SETD4Q9NVD3 440 aa18.32■□□□□ 0.52
VAPA-204ENST00000577901 UPP2O95045 317 aa18.31■□□□□ 0.52
VAPA-204ENST00000577901 ANKRD1Q15327 319 aa18.31■□□□□ 0.52
VAPA-204ENST00000577901 PTPROQ16827 1216 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms