RNA–Protein interactions for RNA: ENST00000577854.1

CDKN2A-211, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3

Gene CDKN2A, Length 442 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-211ENST00000577854 TELO2Q9Y4R8 837 aa10.49□□□□□ -0.73
CDKN2A-211ENST00000577854 STK36Q9NRP7 1315 aa10.49□□□□□ -0.73
CDKN2A-211ENST00000577854 IPO5O00410 1097 aaKnown RBP10.48□□□□□ -0.73
CDKN2A-211ENST00000577854 MEIS1O00470 390 aa10.48□□□□□ -0.73
CDKN2A-211ENST00000577854 SOX1O00570 391 aaPredicted RBP10.48□□□□□ -0.73
CDKN2A-211ENST00000577854 CHMP2AO43633 222 aa10.48□□□□□ -0.73
CDKN2A-211ENST00000577854 CTDNEP1O95476 244 aa10.48□□□□□ -0.73
CDKN2A-211ENST00000577854 FGBP02675 491 aa10.48□□□□□ -0.73
CDKN2A-211ENST00000577854 HOXD8P13378 290 aaPredicted RBP10.48□□□□□ -0.73
CDKN2A-211ENST00000577854 THPOP40225 353 aa10.48□□□□□ -0.73
CDKN2A-211ENST00000577854 ACTR2P61160 394 aa10.48□□□□□ -0.73
CDKN2A-211ENST00000577854 PPFIA1Q13136 1202 aa10.48□□□□□ -0.73
CDKN2A-211ENST00000577854 ITGB3BPQ13352 177 aaPredicted RBP10.48□□□□□ -0.73
CDKN2A-211ENST00000577854 GNL2Q13823 731 aaKnown RBP10.48□□□□□ -0.73
CDKN2A-211ENST00000577854 RABEP1Q15276 862 aa10.48□□□□□ -0.73
CDKN2A-211ENST00000577854 INF2Q27J81 1249 aa10.48□□□□□ -0.73
CDKN2A-211ENST00000577854 LETM2Q2VYF4 491 aa10.48□□□□□ -0.73
CDKN2A-211ENST00000577854 FAM160B1Q5W0V3 765 aa10.48□□□□□ -0.73
CDKN2A-211ENST00000577854 PIK3AP1Q6ZUJ8 805 aa10.48□□□□□ -0.73
CDKN2A-211ENST00000577854 ZNF365Q70YC5 407 aa10.48□□□□□ -0.73
CDKN2A-211ENST00000577854 NIPA1Q7RTP0 329 aa10.48□□□□□ -0.73
CDKN2A-211ENST00000577854 OTOP2Q7RTS6 562 aa10.48□□□□□ -0.73
CDKN2A-211ENST00000577854 CKAP2LQ8IYA6 745 aa10.48□□□□□ -0.73
CDKN2A-211ENST00000577854 FAM184AQ8NB25 1140 aa10.48□□□□□ -0.73
CDKN2A-211ENST00000577854 CAGE1Q8TC20 777 aa10.48□□□□□ -0.73
CDKN2A-211ENST00000577854 ZSCAN31Q96LW9 406 aaPredicted RBP10.48□□□□□ -0.73
CDKN2A-211ENST00000577854 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.48□□□□□ -0.73
CDKN2A-211ENST00000577854 WNT8AQ9H1J5 351 aa10.48□□□□□ -0.73
CDKN2A-211ENST00000577854 SMARCAD1Q9H4L7 1026 aa10.48□□□□□ -0.73
CDKN2A-211ENST00000577854 IL23AQ9NPF7 189 aa10.48□□□□□ -0.73
CDKN2A-211ENST00000577854 GJB4Q9NTQ9 266 aa10.48□□□□□ -0.73
CDKN2A-211ENST00000577854 SETD4Q9NVD3 440 aa10.48□□□□□ -0.73
CDKN2A-211ENST00000577854 ERAP1Q9NZ08 941 aa10.48□□□□□ -0.73
CDKN2A-211ENST00000577854 TRIOBPQ9H2D6 2365 aa10.48□□□□□ -0.73
CDKN2A-211ENST00000577854 KIAA1217Q5T5P2 1943 aa10.47□□□□□ -0.73
CDKN2A-211ENST00000577854 GSTTP1A0A1W2PQM5 241 aa10.47□□□□□ -0.73
CDKN2A-211ENST00000577854 HAS3O00219 553 aa10.47□□□□□ -0.73
CDKN2A-211ENST00000577854 GAS7O60861 476 aa10.47□□□□□ -0.73
CDKN2A-211ENST00000577854 CYP3A4P08684 503 aa10.47□□□□□ -0.73
CDKN2A-211ENST00000577854 CTSHP09668 335 aa10.47□□□□□ -0.73
CDKN2A-211ENST00000577854 ACTN1P12814 892 aa10.47□□□□□ -0.73
CDKN2A-211ENST00000577854 KRT2P35908 639 aa10.47□□□□□ -0.73
CDKN2A-211ENST00000577854 RBM25P49756 843 aaKnown RBP10.47□□□□□ -0.73
CDKN2A-211ENST00000577854 GUCY1B3Q02153 619 aa10.47□□□□□ -0.73
CDKN2A-211ENST00000577854 PTK7Q13308 1070 aa10.47□□□□□ -0.73
CDKN2A-211ENST00000577854 SAFBQ15424 915 aaKnown RBP eCLIP10.47□□□□□ -0.73
CDKN2A-211ENST00000577854 MIS18BP1Q6P0N0 1132 aa10.47□□□□□ -0.73
CDKN2A-211ENST00000577854 LRRC8DQ7L1W4 858 aa10.47□□□□□ -0.73
CDKN2A-211ENST00000577854 SESTD1Q86VW0 696 aa10.47□□□□□ -0.73
CDKN2A-211ENST00000577854 FAM177A1Q8N128 213 aaPredicted RBP10.47□□□□□ -0.73
CDKN2A-211ENST00000577854 DAGLBQ8NCG7 672 aa10.47□□□□□ -0.73
CDKN2A-211ENST00000577854 NSUN7Q8NE18 718 aaKnown RBP10.47□□□□□ -0.73
CDKN2A-211ENST00000577854 TNPO1Q92973 898 aaKnown RBP10.47□□□□□ -0.73
CDKN2A-211ENST00000577854 IL17RAQ96F46 866 aa10.47□□□□□ -0.73
CDKN2A-211ENST00000577854 PHF20Q9BVI0 1012 aa10.47□□□□□ -0.73
CDKN2A-211ENST00000577854 SH2B1Q9NRF2 756 aaPredicted RBP10.47□□□□□ -0.73
CDKN2A-211ENST00000577854 TBC1D22BQ9NU19 505 aa10.47□□□□□ -0.73
CDKN2A-211ENST00000577854 NFASCO94856 1347 aa10.47□□□□□ -0.73
CDKN2A-211ENST00000577854 PITPNM1O00562 1244 aa10.46□□□□□ -0.73
CDKN2A-211ENST00000577854 TREHO43280 583 aa10.46□□□□□ -0.73
CDKN2A-211ENST00000577854 CCNT1O60563 726 aaKnown RBP10.46□□□□□ -0.73
CDKN2A-211ENST00000577854 TDP2O95551 362 aa10.46□□□□□ -0.73
CDKN2A-211ENST00000577854 CKBP12277 381 aa10.46□□□□□ -0.73
CDKN2A-211ENST00000577854 SELPP16109 830 aa10.46□□□□□ -0.73
CDKN2A-211ENST00000577854 STAT5BP51692 787 aa10.46□□□□□ -0.73
CDKN2A-211ENST00000577854 USP11P51784 963 aa10.46□□□□□ -0.73
CDKN2A-211ENST00000577854 GRIK4Q16099 956 aa10.46□□□□□ -0.73
CDKN2A-211ENST00000577854 LRIT3Q3SXY7 679 aa10.46□□□□□ -0.73
CDKN2A-211ENST00000577854 TMEM240Q5SV17 173 aa10.46□□□□□ -0.73
CDKN2A-211ENST00000577854 LRCH2Q5VUJ6 765 aa10.46□□□□□ -0.73
CDKN2A-211ENST00000577854 PDXDC2PQ6P474 469 aa10.46□□□□□ -0.73
CDKN2A-211ENST00000577854 AFAP1L1Q8TED9 768 aa10.46□□□□□ -0.73
CDKN2A-211ENST00000577854 LMBR1Q8WVP7 490 aa10.46□□□□□ -0.73
CDKN2A-211ENST00000577854 C8orf76Q96K31 380 aa10.46□□□□□ -0.73
CDKN2A-211ENST00000577854 FAM161BQ96MY7 647 aa10.46□□□□□ -0.73
CDKN2A-211ENST00000577854 TEKT3Q9BXF9 490 aa10.46□□□□□ -0.73
CDKN2A-211ENST00000577854 RNPEPQ9H4A4 650 aa10.46□□□□□ -0.73
CDKN2A-211ENST00000577854 DDX25Q9UHL0 483 aaKnown RBP10.46□□□□□ -0.73
CDKN2A-211ENST00000577854 LTBP2Q14767 1821 aa10.45□□□□□ -0.74
CDKN2A-211ENST00000577854 EMSYQ7Z589 1322 aa10.45□□□□□ -0.74
CDKN2A-211ENST00000577854 NRCAMQ92823 1304 aa10.45□□□□□ -0.74
CDKN2A-211ENST00000577854 IGLV3-22A0A075B6J6 115 aa10.45□□□□□ -0.74
CDKN2A-211ENST00000577854 POTEB3A0JP26 581 aa10.45□□□□□ -0.74
CDKN2A-211ENST00000577854 CCNE2O96020 404 aa10.45□□□□□ -0.74
CDKN2A-211ENST00000577854 PSAPP07602 524 aa10.45□□□□□ -0.74
CDKN2A-211ENST00000577854 PFKMP08237 780 aa10.45□□□□□ -0.74
CDKN2A-211ENST00000577854 IQCF3P0C7M6 154 aa10.45□□□□□ -0.74
CDKN2A-211ENST00000577854 ATP2B1P20020 1258 aa10.45□□□□□ -0.74
CDKN2A-211ENST00000577854 RFC2P35250 354 aa10.45□□□□□ -0.74
CDKN2A-211ENST00000577854 KRT76Q01546 638 aa10.45□□□□□ -0.74
CDKN2A-211ENST00000577854 NR5A1Q13285 461 aa10.45□□□□□ -0.74
CDKN2A-211ENST00000577854 ZNF618Q5T7W0 954 aa10.45□□□□□ -0.74
CDKN2A-211ENST00000577854 ZNF697Q5TEC3 545 aa10.45□□□□□ -0.74
CDKN2A-211ENST00000577854 SWSAP1Q6NVH7 229 aa10.45□□□□□ -0.74
CDKN2A-211ENST00000577854 POTEBQ6S5H4 581 aa10.45□□□□□ -0.74
CDKN2A-211ENST00000577854 NEK8Q86SG6 692 aa10.45□□□□□ -0.74
CDKN2A-211ENST00000577854 RSPH3Q86UC2 560 aa10.45□□□□□ -0.74
CDKN2A-211ENST00000577854 DIS3L2Q8IYB7 885 aaKnown RBP10.45□□□□□ -0.74
CDKN2A-211ENST00000577854 DEFB123Q8N688 67 aa10.45□□□□□ -0.74
CDKN2A-211ENST00000577854 OXER1Q8TDS5 423 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms