RNA–Protein interactions for RNA: ENST00000576957.1

ATP2A3-215, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 2

Gene ATP2A3, Length 1,159 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-215ENST00000576957 SPZ1Q9BXG8 430 aa15.21■□□□□ 0.03
ATP2A3-215ENST00000576957 RNPEPQ9H4A4 650 aa15.21■□□□□ 0.03
ATP2A3-215ENST00000576957 SUGCTQ9HAC7 445 aa15.21■□□□□ 0.03
ATP2A3-215ENST00000576957 BAZ2BQ9UIF8 2168 aaKnown RBP15.21■□□□□ 0.02
ATP2A3-215ENST00000576957 COL4A4P53420 1690 aaPredicted RBP15.2■□□□□ 0.02
ATP2A3-215ENST00000576957 PIK3CDO00329 1044 aa15.2■□□□□ 0.02
ATP2A3-215ENST00000576957 DDAH1O94760 285 aa15.2■□□□□ 0.02
ATP2A3-215ENST00000576957 KIF5BP33176 963 aa15.2■□□□□ 0.02
ATP2A3-215ENST00000576957 NASPP49321 788 aaPredicted RBP15.2■□□□□ 0.02
ATP2A3-215ENST00000576957 HTRA4P83105 476 aaPredicted RBP15.2■□□□□ 0.02
ATP2A3-215ENST00000576957 MB21D2Q8IYB1 491 aaPredicted RBP15.2■□□□□ 0.02
ATP2A3-215ENST00000576957 GDPD5Q8WTR4 605 aa15.2■□□□□ 0.02
ATP2A3-215ENST00000576957 CUL5Q93034 780 aa15.2■□□□□ 0.02
ATP2A3-215ENST00000576957 RRP36Q96EU6 259 aaKnown RBP15.2■□□□□ 0.02
ATP2A3-215ENST00000576957 INTS4Q96HW7 963 aaKnown RBP15.2■□□□□ 0.02
ATP2A3-215ENST00000576957 ZFP91Q96JP5 570 aaPredicted RBP15.2■□□□□ 0.02
ATP2A3-215ENST00000576957 NECAB3Q96P71 396 aaPredicted RBP15.2■□□□□ 0.02
ATP2A3-215ENST00000576957 GPR20Q99678 358 aa15.2■□□□□ 0.02
ATP2A3-215ENST00000576957 LZTS2Q9BRK4 669 aa15.2■□□□□ 0.02
ATP2A3-215ENST00000576957 C1QTNF1Q9BXJ1 281 aa15.2■□□□□ 0.02
ATP2A3-215ENST00000576957 ZNF215Q9UL58 517 aaPredicted RBP15.2■□□□□ 0.02
ATP2A3-215ENST00000576957 NCOR1O75376 2440 aa15.19■□□□□ 0.02
ATP2A3-215ENST00000576957 TREHO43280 583 aa15.19■□□□□ 0.02
ATP2A3-215ENST00000576957 ANTXR2P58335 489 aa15.19■□□□□ 0.02
ATP2A3-215ENST00000576957 PCNX4Q63HM2 1172 aa15.19■□□□□ 0.02
ATP2A3-215ENST00000576957 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.19■□□□□ 0.02
ATP2A3-215ENST00000576957 CYFIP1Q7L576 1253 aa15.19■□□□□ 0.02
ATP2A3-215ENST00000576957 TMTC2Q8N394 836 aa15.19■□□□□ 0.02
ATP2A3-215ENST00000576957 GIMAP8Q8ND71 665 aaPredicted RBP15.19■□□□□ 0.02
ATP2A3-215ENST00000576957 CTCFLQ8NI51 663 aaPredicted RBP15.19■□□□□ 0.02
ATP2A3-215ENST00000576957 SMARCC2Q8TAQ2 1214 aa15.19■□□□□ 0.02
ATP2A3-215ENST00000576957 SEPT8Q92599 483 aa15.19■□□□□ 0.02
ATP2A3-215ENST00000576957 BCAS3Q9H6U6 928 aa15.19■□□□□ 0.02
ATP2A3-215ENST00000576957 TAF6LQ9Y6J9 622 aa15.19■□□□□ 0.02
ATP2A3-215ENST00000576957 SIP14410 1827 aa15.19■□□□□ 0.02
ATP2A3-215ENST00000576957 MICAL3Q7RTP6 2002 aa15.18■□□□□ 0.02
ATP2A3-215ENST00000576957 GNAQP50148 359 aa15.18■□□□□ 0.02
ATP2A3-215ENST00000576957 SEMA3FQ13275 785 aa15.18■□□□□ 0.02
ATP2A3-215ENST00000576957 FAM117BQ6P1L5 589 aa15.18■□□□□ 0.02
ATP2A3-215ENST00000576957 NLRX1Q86UT6 975 aa15.18■□□□□ 0.02
ATP2A3-215ENST00000576957 ZNF654Q8IZM8 581 aa15.18■□□□□ 0.02
ATP2A3-215ENST00000576957 MYOCDQ8IZQ8 938 aa15.18■□□□□ 0.02
ATP2A3-215ENST00000576957 SP7Q8TDD2 431 aaPredicted RBP15.18■□□□□ 0.02
ATP2A3-215ENST00000576957 APBB2Q92870 758 aa15.18■□□□□ 0.02
ATP2A3-215ENST00000576957 SAMD11Q96NU1 681 aa15.18■□□□□ 0.02
ATP2A3-215ENST00000576957 LY9Q9HBG7 655 aa15.18■□□□□ 0.02
ATP2A3-215ENST00000576957 FOXD4L1Q9NU39 408 aa15.18■□□□□ 0.02
ATP2A3-215ENST00000576957 RTEL1Q9NZ71 1219 aa15.18■□□□□ 0.02
ATP2A3-215ENST00000576957 SEC63Q9UGP8 760 aaKnown RBP15.18■□□□□ 0.02
ATP2A3-215ENST00000576957 MTUS1Q9ULD2 1270 aa15.18■□□□□ 0.02
ATP2A3-215ENST00000576957 MEIS2O14770 477 aa15.17■□□□□ 0.02
ATP2A3-215ENST00000576957 ADAM17P78536 824 aa15.17■□□□□ 0.02
ATP2A3-215ENST00000576957 CUL4AQ13619 759 aa15.17■□□□□ 0.02
ATP2A3-215ENST00000576957 FAM26DQ5JW98 314 aa15.17■□□□□ 0.02
ATP2A3-215ENST00000576957 MCTP1Q6DN14 999 aa15.17■□□□□ 0.02
ATP2A3-215ENST00000576957 USP17L6PQ6QN14 398 aa15.17■□□□□ 0.02
ATP2A3-215ENST00000576957 FBXO22Q8NEZ5 403 aa15.17■□□□□ 0.02
ATP2A3-215ENST00000576957 PIBF1Q8WXW3 757 aa15.17■□□□□ 0.02
ATP2A3-215ENST00000576957 TOP1MTQ969P6 601 aa15.17■□□□□ 0.02
ATP2A3-215ENST00000576957 SYAP1Q96A49 352 aaPredicted RBP15.17■□□□□ 0.02
ATP2A3-215ENST00000576957 CDHR1Q96JP9 859 aa15.17■□□□□ 0.02
ATP2A3-215ENST00000576957 ESYT1Q9BSJ8 1104 aa15.17■□□□□ 0.02
ATP2A3-215ENST00000576957 LMBRD1Q9NUN5 540 aa15.17■□□□□ 0.02
ATP2A3-215ENST00000576957 SETD4Q9NVD3 440 aa15.17■□□□□ 0.02
ATP2A3-215ENST00000576957 RBM8AQ9Y5S9 174 aaKnown RBP15.17■□□□□ 0.02
ATP2A3-215ENST00000576957 NRCAMQ92823 1304 aa15.17■□□□□ 0.02
ATP2A3-215ENST00000576957 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.16■□□□□ 0.02
ATP2A3-215ENST00000576957 TPM2P07951 284 aa15.16■□□□□ 0.02
ATP2A3-215ENST00000576957 RPAINQ86UA6 219 aa15.16■□□□□ 0.02
ATP2A3-215ENST00000576957 GAS2L3Q86XJ1 694 aa15.16■□□□□ 0.02
ATP2A3-215ENST00000576957 GPRASP2Q96D09 838 aa15.16■□□□□ 0.02
ATP2A3-215ENST00000576957 TMEM87BQ96K49 555 aa15.16■□□□□ 0.02
ATP2A3-215ENST00000576957 NAP1L5Q96NT1 182 aaPredicted RBP15.16■□□□□ 0.02
ATP2A3-215ENST00000576957 C17orf80Q9BSJ5 609 aa15.16■□□□□ 0.02
ATP2A3-215ENST00000576957 COL4A6Q14031 1691 aa15.16■□□□□ 0.02
ATP2A3-215ENST00000576957 PRC1O43663 620 aa15.15■□□□□ 0.02
ATP2A3-215ENST00000576957 CALM1P0DP23 149 aa15.15■□□□□ 0.02
ATP2A3-215ENST00000576957 CALM2P0DP24 149 aa15.15■□□□□ 0.02
ATP2A3-215ENST00000576957 CALM3P0DP25 149 aa15.15■□□□□ 0.02
ATP2A3-215ENST00000576957 MCM5P33992 734 aa15.15■□□□□ 0.02
ATP2A3-215ENST00000576957 LIFRP42702 1097 aa15.15■□□□□ 0.02
ATP2A3-215ENST00000576957 PTPROQ16827 1216 aa15.15■□□□□ 0.02
ATP2A3-215ENST00000576957 ZSCAN30Q86W11 494 aa15.15■□□□□ 0.02
ATP2A3-215ENST00000576957 LMBR1Q8WVP7 490 aa15.15■□□□□ 0.02
ATP2A3-215ENST00000576957 MRPL38Q96DV4 380 aaKnown RBP15.15■□□□□ 0.02
ATP2A3-215ENST00000576957 YME1L1Q96TA2 773 aa15.15■□□□□ 0.02
ATP2A3-215ENST00000576957 UBE2ZQ9H832 354 aaPredicted RBP15.15■□□□□ 0.02
ATP2A3-215ENST00000576957 CCDC69A6NI79 296 aa15.14■□□□□ 0.01
ATP2A3-215ENST00000576957 SH2B2O14492 632 aaPredicted RBP15.14■□□□□ 0.01
ATP2A3-215ENST00000576957 MAFGO15525 162 aa15.14■□□□□ 0.01
ATP2A3-215ENST00000576957 CTSHP09668 335 aa15.14■□□□□ 0.01
ATP2A3-215ENST00000576957 TERF1P54274 439 aa15.14■□□□□ 0.01
ATP2A3-215ENST00000576957 ARHGAP4P98171 946 aa15.14■□□□□ 0.01
ATP2A3-215ENST00000576957 ZSCAN23Q3MJ62 389 aa15.14■□□□□ 0.01
ATP2A3-215ENST00000576957 LEXMQ3ZCV2 418 aa15.14■□□□□ 0.01
ATP2A3-215ENST00000576957 EPC2Q52LR7 807 aa15.14■□□□□ 0.01
ATP2A3-215ENST00000576957 UTP14CQ5TAP6 766 aaKnown RBP15.14■□□□□ 0.01
ATP2A3-215ENST00000576957 TAF2Q6P1X5 1199 aa15.14■□□□□ 0.01
ATP2A3-215ENST00000576957 NFXL1Q6ZNB6 911 aa15.14■□□□□ 0.01
ATP2A3-215ENST00000576957 TRIM50Q86XT4 487 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms