RNA–Protein interactions for RNA: ENST00000575346.1

USP43-206, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 5

Gene USP43, Length 711 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-206ENST00000575346 TET1Q8NFU7 2136 aa13.67□□□□□ -0.22
USP43-206ENST00000575346 EIF5BO60841 1220 aaKnown RBP13.67□□□□□ -0.22
USP43-206ENST00000575346 CAND2O75155 1236 aa13.67□□□□□ -0.22
USP43-206ENST00000575346 GNAT1P11488 350 aa13.67□□□□□ -0.22
USP43-206ENST00000575346 PBX2P40425 430 aa13.67□□□□□ -0.22
USP43-206ENST00000575346 ARHGAP4P98171 946 aa13.67□□□□□ -0.22
USP43-206ENST00000575346 AKAP17AQ02040 695 aaKnown RBP13.67□□□□□ -0.22
USP43-206ENST00000575346 PHOSPHO2Q8TCD6 241 aa13.67□□□□□ -0.22
USP43-206ENST00000575346 ATP6V0A1Q93050 837 aa13.67□□□□□ -0.22
USP43-206ENST00000575346 SLC9A7Q96T83 725 aa13.67□□□□□ -0.22
USP43-206ENST00000575346 UPF3BQ9BZI7 483 aaKnown RBP13.67□□□□□ -0.22
USP43-206ENST00000575346 ZNF576Q9H609 170 aa13.67□□□□□ -0.22
USP43-206ENST00000575346 SH3GLB2Q9NR46 395 aa13.67□□□□□ -0.22
USP43-206ENST00000575346 GBF1Q92538 1859 aa13.67□□□□□ -0.22
USP43-206ENST00000575346 EMSYQ7Z589 1322 aa13.66□□□□□ -0.22
USP43-206ENST00000575346 NRCAMQ92823 1304 aa13.66□□□□□ -0.22
USP43-206ENST00000575346 TREHO43280 583 aa13.66□□□□□ -0.22
USP43-206ENST00000575346 NBNO60934 754 aa13.66□□□□□ -0.22
USP43-206ENST00000575346 LGR5O75473 907 aa13.66□□□□□ -0.22
USP43-206ENST00000575346 ARP10275 920 aa13.66□□□□□ -0.22
USP43-206ENST00000575346 CCT2P78371 535 aaKnown RBP13.66□□□□□ -0.22
USP43-206ENST00000575346 ZNF618Q5T7W0 954 aa13.66□□□□□ -0.22
USP43-206ENST00000575346 UTP14CQ5TAP6 766 aaKnown RBP13.66□□□□□ -0.22
USP43-206ENST00000575346 JAKMIP3Q5VZ66 844 aa13.66□□□□□ -0.22
USP43-206ENST00000575346 TRIM50Q86XT4 487 aa13.66□□□□□ -0.22
USP43-206ENST00000575346 FAM177A1Q8N128 213 aaPredicted RBP13.66□□□□□ -0.22
USP43-206ENST00000575346 CCDC148Q8NFR7 591 aa13.66□□□□□ -0.22
USP43-206ENST00000575346 BICD2Q8TD16 824 aa13.66□□□□□ -0.22
USP43-206ENST00000575346 SLC26A6Q9BXS9 759 aa13.66□□□□□ -0.22
USP43-206ENST00000575346 NCOA5Q9HCD5 579 aaKnown RBP13.66□□□□□ -0.22
USP43-206ENST00000575346 AGO4Q9HCK5 861 aaKnown RBP13.66□□□□□ -0.22
USP43-206ENST00000575346 JPH1Q9HDC5 661 aaPredicted RBP13.66□□□□□ -0.22
USP43-206ENST00000575346 PDRG1Q9NUG6 133 aa13.66□□□□□ -0.22
USP43-206ENST00000575346 ERAP1Q9NZ08 941 aa13.66□□□□□ -0.22
USP43-206ENST00000575346 SLC9A2Q9UBY0 812 aa13.66□□□□□ -0.22
USP43-206ENST00000575346 MSRAQ9UJ68 235 aa13.66□□□□□ -0.22
USP43-206ENST00000575346 PCDHA11Q9Y5I1 949 aa13.66□□□□□ -0.22
USP43-206ENST00000575346 IGLV3-22A0A075B6J6 115 aa13.65□□□□□ -0.22
USP43-206ENST00000575346 ZBBXA8MT70 800 aa13.65□□□□□ -0.22
USP43-206ENST00000575346 ADAMTS3O15072 1205 aa13.65□□□□□ -0.22
USP43-206ENST00000575346 ATG7O95352 703 aa13.65□□□□□ -0.22
USP43-206ENST00000575346 ATP2A2P16615 1042 aaKnown RBP13.65□□□□□ -0.22
USP43-206ENST00000575346 CIITAP33076 1130 aa13.65□□□□□ -0.22
USP43-206ENST00000575346 SP4Q02446 784 aa13.65□□□□□ -0.22
USP43-206ENST00000575346 MBTPS1Q14703 1052 aa13.65□□□□□ -0.22
USP43-206ENST00000575346 GRIN2CQ14957 1233 aa13.65□□□□□ -0.22
USP43-206ENST00000575346 CNKSR3Q6P9H4 555 aa13.65□□□□□ -0.22
USP43-206ENST00000575346 RPAINQ86UA6 219 aa13.65□□□□□ -0.22
USP43-206ENST00000575346 REXO1Q8N1G1 1221 aaKnown RBP13.65□□□□□ -0.22
USP43-206ENST00000575346 PCYT2Q99447 389 aa13.65□□□□□ -0.22
USP43-206ENST00000575346 SDF4Q9BRK5 362 aa13.65□□□□□ -0.22
USP43-206ENST00000575346 FTOQ9C0B1 505 aaKnown RBP eCLIP13.65□□□□□ -0.22
USP43-206ENST00000575346 SMARCAD1Q9H4L7 1026 aa13.65□□□□□ -0.22
USP43-206ENST00000575346 SETD4Q9NVD3 440 aa13.65□□□□□ -0.22
USP43-206ENST00000575346 YBX2Q9Y2T7 364 aaKnown RBP13.65□□□□□ -0.22
USP43-206ENST00000575346 IGKV6D-21A0A0A0MT36 114 aa13.64□□□□□ -0.23
USP43-206ENST00000575346 FAM86B1E9PN63 330 aa13.64□□□□□ -0.23
USP43-206ENST00000575346 EFCAB14O75071 495 aa13.64□□□□□ -0.23
USP43-206ENST00000575346 DEXIO95424 95 aa13.64□□□□□ -0.23
USP43-206ENST00000575346 FAM86B2P0C5J1 330 aa13.64□□□□□ -0.23
USP43-206ENST00000575346 ITGB3BPQ13352 177 aaPredicted RBP13.64□□□□□ -0.23
USP43-206ENST00000575346 PLPPR4Q7Z2D5 763 aa13.64□□□□□ -0.23
USP43-206ENST00000575346 TRIM22Q8IYM9 498 aa13.64□□□□□ -0.23
USP43-206ENST00000575346 LMBR1Q8WVP7 490 aa13.64□□□□□ -0.23
USP43-206ENST00000575346 PKD2L1Q9P0L9 805 aa13.64□□□□□ -0.23
USP43-206ENST00000575346 VCANP13611 3396 aa13.64□□□□□ -0.23
USP43-206ENST00000575346 EYSQ5T1H1 3165 aa13.64□□□□□ -0.23
USP43-206ENST00000575346 KAT6AQ92794 2004 aa13.63□□□□□ -0.23
USP43-206ENST00000575346 PTPRSQ13332 1948 aa13.63□□□□□ -0.23
USP43-206ENST00000575346 ABHD14A-ACY1A0A1B0GW23 586 aa13.63□□□□□ -0.23
USP43-206ENST00000575346 MBLAC1A4D2B0 266 aaPredicted RBP13.63□□□□□ -0.23
USP43-206ENST00000575346 RSPH10B2B2RC85 870 aa13.63□□□□□ -0.23
USP43-206ENST00000575346 CPLX1O14810 134 aa13.63□□□□□ -0.23
USP43-206ENST00000575346 DHX15O43143 795 aaKnown RBP13.63□□□□□ -0.23
USP43-206ENST00000575346 RSPH10BP0C881 870 aa13.63□□□□□ -0.23
USP43-206ENST00000575346 ZNF76P36508 570 aa13.63□□□□□ -0.23
USP43-206ENST00000575346 THPOP40225 353 aa13.63□□□□□ -0.23
USP43-206ENST00000575346 ACTR2P61160 394 aa13.63□□□□□ -0.23
USP43-206ENST00000575346 SETQ01105 290 aaPredicted RBP13.63□□□□□ -0.23
USP43-206ENST00000575346 SSRP1Q08945 709 aaKnown RBP13.63□□□□□ -0.23
USP43-206ENST00000575346 MKRN4PQ13434 485 aaPredicted RBP13.63□□□□□ -0.23
USP43-206ENST00000575346 FAM26DQ5JW98 314 aa13.63□□□□□ -0.23
USP43-206ENST00000575346 TAF2Q6P1X5 1199 aa13.63□□□□□ -0.23
USP43-206ENST00000575346 CPLX2Q6PUV4 134 aaKnown RBP13.63□□□□□ -0.23
USP43-206ENST00000575346 PLA2G4DQ86XP0 818 aa13.63□□□□□ -0.23
USP43-206ENST00000575346 MAFAQ8NHW3 353 aaPredicted RBP13.63□□□□□ -0.23
USP43-206ENST00000575346 MYLIPQ8WY64 445 aa13.63□□□□□ -0.23
USP43-206ENST00000575346 NKX2-4Q9H2Z4 354 aa13.63□□□□□ -0.23
USP43-206ENST00000575346 SLC28A3Q9HAS3 691 aa13.63□□□□□ -0.23
USP43-206ENST00000575346 VPS54Q9P1Q0 977 aa13.63□□□□□ -0.23
USP43-206ENST00000575346 M0R2N6 131 aa13.62□□□□□ -0.23
USP43-206ENST00000575346 EDIL3O43854 480 aa13.62□□□□□ -0.23
USP43-206ENST00000575346 SLC26A2P50443 739 aa13.62□□□□□ -0.23
USP43-206ENST00000575346 USP11P51784 963 aa13.62□□□□□ -0.23
USP43-206ENST00000575346 RABGGTBP53611 331 aa13.62□□□□□ -0.23
USP43-206ENST00000575346 WDR5P61964 334 aaKnown RBP13.62□□□□□ -0.23
USP43-206ENST00000575346 SCRN1Q12765 414 aa13.62□□□□□ -0.23
USP43-206ENST00000575346 PPFIA1Q13136 1202 aa13.62□□□□□ -0.23
USP43-206ENST00000575346 ANKRD1Q15327 319 aa13.62□□□□□ -0.23
USP43-206ENST00000575346 PLEKHG4Q58EX7 1191 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms