RNA–Protein interactions for RNA: ENST00000575214.1

HCFC1R1-208, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2

Gene HCFC1R1, Length 1,365 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-208ENST00000575214 NONOQ15233 471 aaKnown RBP eCLIP23.52■■□□□ 1.36
HCFC1R1-208ENST00000575214 ZNF577Q9BSK1 485 aa23.52■■□□□ 1.36
HCFC1R1-208ENST00000575214 CCDC194A0A1B0GVG4 234 aa23.52■■□□□ 1.36
HCFC1R1-208ENST00000575214 IPO5O00410 1097 aaKnown RBP23.52■■□□□ 1.36
HCFC1R1-208ENST00000575214 CSF2RAP15509 400 aa23.52■■□□□ 1.36
HCFC1R1-208ENST00000575214 GLG1Q92896 1179 aa23.52■■□□□ 1.36
HCFC1R1-208ENST00000575214 SMIM10L2AP0DMW4 78 aa23.51■■□□□ 1.35
HCFC1R1-208ENST00000575214 SMIM10L2BP0DMW5 78 aa23.51■■□□□ 1.35
HCFC1R1-208ENST00000575214 FXR1P51114 621 aaKnown RBP eCLIP23.51■■□□□ 1.35
HCFC1R1-208ENST00000575214 EPHB4P54760 987 aa23.51■■□□□ 1.35
HCFC1R1-208ENST00000575214 ACTR2P61160 394 aa23.51■■□□□ 1.35
HCFC1R1-208ENST00000575214 TRIM29Q14134 588 aa23.51■■□□□ 1.35
HCFC1R1-208ENST00000575214 SHHQ15465 462 aa23.51■■□□□ 1.35
HCFC1R1-208ENST00000575214 C9orf50Q5SZB4 431 aa23.51■■□□□ 1.35
HCFC1R1-208ENST00000575214 WNT8AQ9H1J5 351 aa23.51■■□□□ 1.35
HCFC1R1-208ENST00000575214 BRMS1Q9HCU9 246 aa23.51■■□□□ 1.35
HCFC1R1-208ENST00000575214 C17orf102A2RUQ5 167 aa23.5■■□□□ 1.35
HCFC1R1-208ENST00000575214 EDIL3O43854 480 aa23.5■■□□□ 1.35
HCFC1R1-208ENST00000575214 ZNF200P98182 395 aaPredicted RBP23.5■■□□□ 1.35
HCFC1R1-208ENST00000575214 BFSP2Q13515 415 aa23.5■■□□□ 1.35
HCFC1R1-208ENST00000575214 INF2Q27J81 1249 aa23.5■■□□□ 1.35
HCFC1R1-208ENST00000575214 CCDC155Q8N6L0 562 aa23.5■■□□□ 1.35
HCFC1R1-208ENST00000575214 RETREG2Q8NC44 543 aa23.5■■□□□ 1.35
HCFC1R1-208ENST00000575214 OXER1Q8TDS5 423 aa23.5■■□□□ 1.35
HCFC1R1-208ENST00000575214 LENG9Q96B70 501 aa23.5■■□□□ 1.35
HCFC1R1-208ENST00000575214 SCLYQ96I15 445 aa23.5■■□□□ 1.35
HCFC1R1-208ENST00000575214 CTAGE1Q96RT6 745 aa23.5■■□□□ 1.35
HCFC1R1-208ENST00000575214 LLPHQ9BRT6 129 aaKnown RBP23.5■■□□□ 1.35
HCFC1R1-208ENST00000575214 BACH2Q9BYV9 841 aa23.5■■□□□ 1.35
HCFC1R1-208ENST00000575214 SMARCAD1Q9H4L7 1026 aa23.5■■□□□ 1.35
HCFC1R1-208ENST00000575214 TCEAL9Q9UHQ7 104 aa23.5■■□□□ 1.35
HCFC1R1-208ENST00000575214 LAMA3Q16787 3333 aa23.49■■□□□ 1.35
HCFC1R1-208ENST00000575214 MARK3P27448 753 aa23.49■■□□□ 1.35
HCFC1R1-208ENST00000575214 KRT2P35908 639 aa23.49■■□□□ 1.35
HCFC1R1-208ENST00000575214 IL27Q8NEV9 243 aa23.49■■□□□ 1.35
HCFC1R1-208ENST00000575214 CAGE1Q8TC20 777 aa23.49■■□□□ 1.35
HCFC1R1-208ENST00000575214 AZI2Q9H6S1 392 aa23.49■■□□□ 1.35
HCFC1R1-208ENST00000575214 TBC1D22BQ9NU19 505 aa23.49■■□□□ 1.35
HCFC1R1-208ENST00000575214 ERAP1Q9NZ08 941 aa23.49■■□□□ 1.35
HCFC1R1-208ENST00000575214 EMSYQ7Z589 1322 aa23.48■■□□□ 1.35
HCFC1R1-208ENST00000575214 PITPNM1O00562 1244 aa23.48■■□□□ 1.35
HCFC1R1-208ENST00000575214 DHX15O43143 795 aaKnown RBP23.48■■□□□ 1.35
HCFC1R1-208ENST00000575214 ACRP10323 421 aa23.48■■□□□ 1.35
HCFC1R1-208ENST00000575214 HIC1Q14526 733 aa23.48■■□□□ 1.35
HCFC1R1-208ENST00000575214 PIK3AP1Q6ZUJ8 805 aa23.48■■□□□ 1.35
HCFC1R1-208ENST00000575214 RNPEPQ9H4A4 650 aa23.48■■□□□ 1.35
HCFC1R1-208ENST00000575214 LGR5O75473 907 aa23.47■■□□□ 1.35
HCFC1R1-208ENST00000575214 TDP2O95551 362 aa23.47■■□□□ 1.35
HCFC1R1-208ENST00000575214 CCNE2O96020 404 aa23.47■■□□□ 1.35
HCFC1R1-208ENST00000575214 HMGN5P82970 282 aaKnown RBP23.47■■□□□ 1.35
HCFC1R1-208ENST00000575214 PTK7Q13308 1070 aa23.47■■□□□ 1.35
HCFC1R1-208ENST00000575214 LETM2Q2VYF4 491 aa23.47■■□□□ 1.35
HCFC1R1-208ENST00000575214 KRT40Q6A162 431 aa23.47■■□□□ 1.35
HCFC1R1-208ENST00000575214 DHX38Q92620 1227 aaKnown RBP23.47■■□□□ 1.35
HCFC1R1-208ENST00000575214 ATP6V0A1Q93050 837 aa23.47■■□□□ 1.35
HCFC1R1-208ENST00000575214 RNPC3Q96LT9 517 aaKnown RBP23.47■■□□□ 1.35
HCFC1R1-208ENST00000575214 PCYT2Q99447 389 aa23.47■■□□□ 1.35
HCFC1R1-208ENST00000575214 IL23AQ9NPF7 189 aa23.47■■□□□ 1.35
HCFC1R1-208ENST00000575214 SETD4Q9NVD3 440 aa23.47■■□□□ 1.35
HCFC1R1-208ENST00000575214 MSH4O15457 936 aa23.46■■□□□ 1.35
HCFC1R1-208ENST00000575214 MMP1P03956 469 aa23.46■■□□□ 1.35
HCFC1R1-208ENST00000575214 GNAT1P11488 350 aa23.46■■□□□ 1.35
HCFC1R1-208ENST00000575214 NR5A1Q13285 461 aa23.46■■□□□ 1.35
HCFC1R1-208ENST00000575214 LRIT3Q3SXY7 679 aa23.46■■□□□ 1.35
HCFC1R1-208ENST00000575214 Q4G0T1 1027 aa23.46■■□□□ 1.35
HCFC1R1-208ENST00000575214 PSRC1Q6PGN9 363 aaPredicted RBP23.46■■□□□ 1.35
HCFC1R1-208ENST00000575214 MOXD1Q6UVY6 613 aa23.46■■□□□ 1.35
HCFC1R1-208ENST00000575214 NEK8Q86SG6 692 aa23.46■■□□□ 1.35
HCFC1R1-208ENST00000575214 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.46■■□□□ 1.352e-8■■■□□ 17
HCFC1R1-208ENST00000575214 CYP3A7-CYP3A51PA0A087WV96 503 aa23.45■■□□□ 1.34
HCFC1R1-208ENST00000575214 SOX1O00570 391 aaPredicted RBP23.45■■□□□ 1.34
HCFC1R1-208ENST00000575214 BACH1O14867 736 aa23.45■■□□□ 1.34
HCFC1R1-208ENST00000575214 ATG7O95352 703 aa23.45■■□□□ 1.34
HCFC1R1-208ENST00000575214 CYP3A7P24462 503 aa23.45■■□□□ 1.34
HCFC1R1-208ENST00000575214 HOXC8P31273 242 aa23.45■■□□□ 1.34
HCFC1R1-208ENST00000575214 MIS18BP1Q6P0N0 1132 aa23.45■■□□□ 1.34
HCFC1R1-208ENST00000575214 FAM184AQ8NB25 1140 aa23.45■■□□□ 1.34
HCFC1R1-208ENST00000575214 AFAP1L1Q8TED9 768 aa23.45■■□□□ 1.34
HCFC1R1-208ENST00000575214 TREHO43280 583 aa23.44■■□□□ 1.34
HCFC1R1-208ENST00000575214 CD2BP2O95400 341 aaKnown RBP23.44■■□□□ 1.34
HCFC1R1-208ENST00000575214 IQCF3P0C7M6 154 aa23.44■■□□□ 1.34
HCFC1R1-208ENST00000575214 STAT5BP51692 787 aa23.44■■□□□ 1.34
HCFC1R1-208ENST00000575214 KRT76Q01546 638 aa23.44■■□□□ 1.34
HCFC1R1-208ENST00000575214 GUCY1B3Q02153 619 aa23.44■■□□□ 1.34
HCFC1R1-208ENST00000575214 PPFIA1Q13136 1202 aa23.44■■□□□ 1.34
HCFC1R1-208ENST00000575214 TMEM240Q5SV17 173 aa23.44■■□□□ 1.34
HCFC1R1-208ENST00000575214 ZNF746Q6NUN9 644 aaPredicted RBP23.44■■□□□ 1.34
HCFC1R1-208ENST00000575214 ABHD15Q6UXT9 468 aa23.44■■□□□ 1.34
HCFC1R1-208ENST00000575214 ZNF365Q70YC5 407 aa23.44■■□□□ 1.34
HCFC1R1-208ENST00000575214 C16orf59Q7L2K0 433 aa23.44■■□□□ 1.34
HCFC1R1-208ENST00000575214 DIS3L2Q8IYB7 885 aaKnown RBP23.44■■□□□ 1.34
HCFC1R1-208ENST00000575214 RPUSD2Q8IZ73 545 aaKnown RBP23.44■■□□□ 1.34
HCFC1R1-208ENST00000575214 LMBR1Q8WVP7 490 aa23.44■■□□□ 1.34
HCFC1R1-208ENST00000575214 C8orf76Q96K31 380 aa23.44■■□□□ 1.34
HCFC1R1-208ENST00000575214 DDX25Q9UHL0 483 aaKnown RBP23.44■■□□□ 1.34
HCFC1R1-208ENST00000575214 NRCAMQ92823 1304 aa23.44■■□□□ 1.34
HCFC1R1-208ENST00000575214 BTBD18B2RXH4 712 aa23.43■■□□□ 1.34
HCFC1R1-208ENST00000575214 GAS7O60861 476 aa23.43■■□□□ 1.34
HCFC1R1-208ENST00000575214 CKBP12277 381 aa23.43■■□□□ 1.34
HCFC1R1-208ENST00000575214 MCM2P49736 904 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms