RNA–Protein interactions for RNA: ENST00000575185.1

SPNS3-203, Transcript of sphingolipid transporter 3 (putative), humanhuman

TSL 5

Gene SPNS3, Length 496 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-203ENST00000575185 FAM50BQ9Y247 325 aa24■■□□□ 1.43
SPNS3-203ENST00000575185 CYTH3O43739 400 aa23.99■■□□□ 1.43
SPNS3-203ENST00000575185 IGHDP01880 384 aa23.99■■□□□ 1.43
SPNS3-203ENST00000575185 GHRP10912 638 aa23.99■■□□□ 1.43
SPNS3-203ENST00000575185 GTF2F1P35269 517 aaKnown RBP eCLIP23.99■■□□□ 1.43
SPNS3-203ENST00000575185 ADAM17P78536 824 aa23.99■■□□□ 1.43
SPNS3-203ENST00000575185 SP4Q02446 784 aa23.99■■□□□ 1.43
SPNS3-203ENST00000575185 CTC1Q2NKJ3 1217 aa23.99■■□□□ 1.43
SPNS3-203ENST00000575185 UTP14CQ5TAP6 766 aaKnown RBP23.99■■□□□ 1.43
SPNS3-203ENST00000575185 METTL7BQ6UX53 244 aa23.99■■□□□ 1.43
SPNS3-203ENST00000575185 SAMD3Q8N6K7 520 aa23.99■■□□□ 1.43
SPNS3-203ENST00000575185 APBB2Q92870 758 aa23.99■■□□□ 1.43
SPNS3-203ENST00000575185 INPP4AQ96PE3 977 aaPredicted RBP23.99■■□□□ 1.43
SPNS3-203ENST00000575185 USP26Q9BXU7 913 aa23.99■■□□□ 1.43
SPNS3-203ENST00000575185 CNNM2Q9H8M5 875 aa23.99■■□□□ 1.43
SPNS3-203ENST00000575185 FRMPD4Q14CM0 1322 aa23.99■■□□□ 1.43
SPNS3-203ENST00000575185 ADGRA3Q8IWK6 1321 aa23.99■■□□□ 1.43
SPNS3-203ENST00000575185 USP34Q70CQ2 3546 aa23.98■■□□□ 1.43
SPNS3-203ENST00000575185 C5orf67F2Z3F1 127 aa23.98■■□□□ 1.43
SPNS3-203ENST00000575185 CHRNA1P02708 482 aa23.98■■□□□ 1.43
SPNS3-203ENST00000575185 ICAM3P32942 547 aa23.98■■□□□ 1.43
SPNS3-203ENST00000575185 GNPTABQ3T906 1256 aa23.98■■□□□ 1.43
SPNS3-203ENST00000575185 FAM26DQ5JW98 314 aa23.98■■□□□ 1.43
SPNS3-203ENST00000575185 RUFY4Q6ZNE9 571 aa23.98■■□□□ 1.43
SPNS3-203ENST00000575185 RIOX1Q9H6W3 641 aa23.98■■□□□ 1.43
SPNS3-203ENST00000575185 RC3H2Q9HBD1 1191 aaKnown RBP23.98■■□□□ 1.43
SPNS3-203ENST00000575185 SENP2Q9HC62 589 aa23.98■■□□□ 1.43
SPNS3-203ENST00000575185 MUTYHQ9UIF7 546 aa23.98■■□□□ 1.43
SPNS3-203ENST00000575185 SPATA31C2B4DYI2 1134 aa23.97■■□□□ 1.43
SPNS3-203ENST00000575185 LINC01565O15544 149 aa23.97■■□□□ 1.43
SPNS3-203ENST00000575185 TBX10O75333 385 aa23.97■■□□□ 1.43
SPNS3-203ENST00000575185 GNAT1P11488 350 aa23.97■■□□□ 1.43
SPNS3-203ENST00000575185 GRM4Q14833 912 aa23.97■■□□□ 1.43
SPNS3-203ENST00000575185 SMAD2Q15796 467 aaKnown RBP23.97■■□□□ 1.43
SPNS3-203ENST00000575185 LOXHD1Q8IVV2 1947 aa23.97■■□□□ 1.43
SPNS3-203ENST00000575185 TECTAO75443 2155 aa23.96■■□□□ 1.43
SPNS3-203ENST00000575185 TTC3P53804 2025 aa23.96■■□□□ 1.43
SPNS3-203ENST00000575185 MBTPS2O43462 519 aa23.96■■□□□ 1.43
SPNS3-203ENST00000575185 BMPR1AP36894 532 aa23.96■■□□□ 1.43
SPNS3-203ENST00000575185 NEDD9Q14511 834 aa23.96■■□□□ 1.43
SPNS3-203ENST00000575185 PIBF1Q8WXW3 757 aa23.96■■□□□ 1.43
SPNS3-203ENST00000575185 C11orf84Q9BUA3 381 aaPredicted RBP23.96■■□□□ 1.43
SPNS3-203ENST00000575185 OSBPL3Q9H4L5 887 aa23.96■■□□□ 1.43
SPNS3-203ENST00000575185 ZNF215Q9UL58 517 aaPredicted RBP23.96■■□□□ 1.43
SPNS3-203ENST00000575185 FIBPO43427 364 aa23.95■■□□□ 1.42
SPNS3-203ENST00000575185 MGAT3Q09327 533 aa23.95■■□□□ 1.42
SPNS3-203ENST00000575185 LPIN1Q14693 890 aa23.95■■□□□ 1.42
SPNS3-203ENST00000575185 IGFLR1Q9H665 355 aa23.95■■□□□ 1.42
SPNS3-203ENST00000575185 PNMA6FA0A0J9YX94 578 aa23.94■■□□□ 1.42
SPNS3-203ENST00000575185 RB1P06400 928 aa23.94■■□□□ 1.42
SPNS3-203ENST00000575185 CHD1LQ86WJ1 897 aa23.94■■□□□ 1.42
SPNS3-203ENST00000575185 CLP1Q92989 425 aaKnown RBP23.94■■□□□ 1.42
SPNS3-203ENST00000575185 LMAN2LQ9H0V9 348 aa23.94■■□□□ 1.42
SPNS3-203ENST00000575185 EHMT1Q9H9B1 1298 aa23.94■■□□□ 1.42
SPNS3-203ENST00000575185 PLXNA4Q9HCM2 1894 aa23.94■■□□□ 1.42
SPNS3-203ENST00000575185 NUCB1Q02818 461 aa23.93■■□□□ 1.42
SPNS3-203ENST00000575185 UPF3BQ9BZI7 483 aaKnown RBP23.93■■□□□ 1.42
SPNS3-203ENST00000575185 ALG13Q9NP73 1137 aaKnown RBP23.93■■□□□ 1.42
SPNS3-203ENST00000575185 NRCAMQ92823 1304 aa23.92■■□□□ 1.42
SPNS3-203ENST00000575185 HIP1O00291 1037 aa23.92■■□□□ 1.42
SPNS3-203ENST00000575185 NCK2O43639 380 aa23.92■■□□□ 1.42
SPNS3-203ENST00000575185 STAM2O75886 525 aa23.92■■□□□ 1.42
SPNS3-203ENST00000575185 MMP1P03956 469 aa23.92■■□□□ 1.42
SPNS3-203ENST00000575185 SMAD4Q13485 552 aaKnown RBP23.92■■□□□ 1.42
SPNS3-203ENST00000575185 CAMK1Q14012 370 aa23.92■■□□□ 1.42
SPNS3-203ENST00000575185 BTG3Q14201 252 aaPredicted RBP23.92■■□□□ 1.42
SPNS3-203ENST00000575185 RNF135Q8IUD6 432 aa23.92■■□□□ 1.42
SPNS3-203ENST00000575185 LINC01599Q8WXQ3 324 aa23.92■■□□□ 1.42
SPNS3-203ENST00000575185 ZNF689Q96CS4 500 aaPredicted RBP23.92■■□□□ 1.42
SPNS3-203ENST00000575185 KCNH6Q9H252 994 aa23.92■■□□□ 1.42
SPNS3-203ENST00000575185 RWDD3Q9Y3V2 267 aa23.92■■□□□ 1.42
SPNS3-203ENST00000575185 ENPP3O14638 875 aa23.91■■□□□ 1.42
SPNS3-203ENST00000575185 MARK3P27448 753 aa23.91■■□□□ 1.42
SPNS3-203ENST00000575185 TCF7P36402 384 aaPredicted RBP23.91■■□□□ 1.42
SPNS3-203ENST00000575185 TRAF1Q13077 416 aa23.91■■□□□ 1.42
SPNS3-203ENST00000575185 HERC4Q5GLZ8 1057 aaPredicted RBP23.91■■□□□ 1.42
SPNS3-203ENST00000575185 USP17L6PQ6QN14 398 aa23.91■■□□□ 1.42
SPNS3-203ENST00000575185 ZBTB10Q96DT7 871 aa23.91■■□□□ 1.42
SPNS3-203ENST00000575185 CCDC136Q96JN2 1154 aa23.91■■□□□ 1.42
SPNS3-203ENST00000575185 PHOX2BQ99453 314 aa23.91■■□□□ 1.42
SPNS3-203ENST00000575185 POP1Q99575 1024 aaKnown RBP23.91■■□□□ 1.42
SPNS3-203ENST00000575185 TAF6LQ9Y6J9 622 aa23.91■■□□□ 1.42
SPNS3-203ENST00000575185 STXBP3O00186 592 aa23.9■■□□□ 1.42
SPNS3-203ENST00000575185 IFIT3O14879 490 aaKnown RBP23.9■■□□□ 1.42
SPNS3-203ENST00000575185 DNAJB1P25685 340 aa23.9■■□□□ 1.42
SPNS3-203ENST00000575185 TROAPQ12815 778 aa23.9■■□□□ 1.42
SPNS3-203ENST00000575185 PPFIA1Q13136 1202 aa23.9■■□□□ 1.42
SPNS3-203ENST00000575185 FBXO47Q5MNV8 452 aa23.9■■□□□ 1.42
SPNS3-203ENST00000575185 CENPQQ7L2Z9 268 aaPredicted RBP23.9■■□□□ 1.42
SPNS3-203ENST00000575185 DNAJB3Q8WWF6 145 aa23.9■■□□□ 1.42
SPNS3-203ENST00000575185 CD207Q9UJ71 328 aa23.9■■□□□ 1.42
SPNS3-203ENST00000575185 MRPL42Q9Y6G3 142 aaKnown RBP23.9■■□□□ 1.42
SPNS3-203ENST00000575185 KMT2EQ8IZD2 1858 aa23.9■■□□□ 1.42
SPNS3-203ENST00000575185 DGKIO75912 1065 aa23.89■■□□□ 1.41
SPNS3-203ENST00000575185 PCNX4Q63HM2 1172 aa23.89■■□□□ 1.41
SPNS3-203ENST00000575185 ADGRD2Q7Z7M1 963 aa23.89■■□□□ 1.41
SPNS3-203ENST00000575185 AGO3Q9H9G7 860 aaKnown RBP23.89■■□□□ 1.41
SPNS3-203ENST00000575185 TUBE1Q9UJT0 475 aa23.89■■□□□ 1.41
SPNS3-203ENST00000575185 PLAGL2Q9UPG8 496 aa23.89■■□□□ 1.41
SPNS3-203ENST00000575185 CDY2AQ9Y6F7 541 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms