RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 OGFOD1Q8N543 542 aa9.36□□□□□ -0.91
RPAIN-215ENST00000575112 MSL3Q8N5Y2 521 aaKnown RBP9.36□□□□□ -0.91
RPAIN-215ENST00000575112 GJD4Q96KN9 370 aaPredicted RBP9.36□□□□□ -0.91
RPAIN-215ENST00000575112 OSBPL9Q96SU4 736 aa9.36□□□□□ -0.91
RPAIN-215ENST00000575112 MYCBPQ99417 103 aaPredicted RBP9.36□□□□□ -0.91
RPAIN-215ENST00000575112 CXorf56Q9H5V9 222 aa9.36□□□□□ -0.91
RPAIN-215ENST00000575112 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.36□□□□□ -0.91
RPAIN-215ENST00000575112 KIF1AQ12756 1690 aa9.36□□□□□ -0.91
RPAIN-215ENST00000575112 OPLAHO14841 1288 aa9.36□□□□□ -0.91
RPAIN-215ENST00000575112 SCP2P22307 547 aa9.36□□□□□ -0.91
RPAIN-215ENST00000575112 NR2F2P24468 414 aa9.36□□□□□ -0.91
RPAIN-215ENST00000575112 CCNE1P24864 410 aa9.36□□□□□ -0.91
RPAIN-215ENST00000575112 PPFIA1Q13136 1202 aa9.36□□□□□ -0.91
RPAIN-215ENST00000575112 CDC37Q16543 378 aaPredicted RBP9.36□□□□□ -0.91
RPAIN-215ENST00000575112 RNF187Q5TA31 235 aaPredicted RBP9.36□□□□□ -0.91
RPAIN-215ENST00000575112 GJB7Q6PEY0 223 aa9.36□□□□□ -0.91
RPAIN-215ENST00000575112 PIK3R5Q8WYR1 880 aa9.36□□□□□ -0.91
RPAIN-215ENST00000575112 CCDC127Q96BQ5 260 aa9.36□□□□□ -0.91
RPAIN-215ENST00000575112 ALS2CR12Q96Q35 445 aa9.36□□□□□ -0.91
RPAIN-215ENST00000575112 ACBD3Q9H3P7 528 aa9.36□□□□□ -0.91
RPAIN-215ENST00000575112 PPANQ9NQ55 473 aaKnown RBP9.36□□□□□ -0.91
RPAIN-215ENST00000575112 MTMR4Q9NYA4 1195 aa9.36□□□□□ -0.91
RPAIN-215ENST00000575112 MYO1AQ9UBC5 1043 aa9.36□□□□□ -0.91
RPAIN-215ENST00000575112 RBAK-RBAKDNI3L0D1 243 aa9.36□□□□□ -0.91
RPAIN-215ENST00000575112 TMOD1P28289 359 aa9.36□□□□□ -0.91
RPAIN-215ENST00000575112 SSTR3P32745 418 aaPredicted RBP9.36□□□□□ -0.91
RPAIN-215ENST00000575112 HSPA1LP34931 641 aa9.36□□□□□ -0.91
RPAIN-215ENST00000575112 GUCY2DQ02846 1103 aa9.36□□□□□ -0.91
RPAIN-215ENST00000575112 IFT88Q13099 833 aa9.36□□□□□ -0.91
RPAIN-215ENST00000575112 CCDC65Q8IXS2 484 aa9.36□□□□□ -0.91
RPAIN-215ENST00000575112 C4orf32Q8N8J7 132 aa9.36□□□□□ -0.91
RPAIN-215ENST00000575112 EPB41L5Q9HCM4 733 aa9.36□□□□□ -0.91
RPAIN-215ENST00000575112 ATRNO75882 1429 aa9.36□□□□□ -0.91
RPAIN-215ENST00000575112 RSPH10B2B2RC85 870 aa9.35□□□□□ -0.91
RPAIN-215ENST00000575112 MYCNP04198 464 aaPredicted RBP9.35□□□□□ -0.91
RPAIN-215ENST00000575112 PLA2G4BP0C869 781 aa9.35□□□□□ -0.91
RPAIN-215ENST00000575112 RSPH10BP0C881 870 aa9.35□□□□□ -0.91
RPAIN-215ENST00000575112 CRKP46108 304 aa9.35□□□□□ -0.91
RPAIN-215ENST00000575112 QPCTQ16769 361 aa9.35□□□□□ -0.91
RPAIN-215ENST00000575112 ABCB5Q2M3G0 1257 aa9.35□□□□□ -0.91
RPAIN-215ENST00000575112 CDC42EP5Q6NZY7 148 aa9.35□□□□□ -0.91
RPAIN-215ENST00000575112 NEDD1Q8NHV4 660 aa9.35□□□□□ -0.91
RPAIN-215ENST00000575112 CTNNBL1Q8WYA6 563 aaPredicted RBP9.35□□□□□ -0.91
RPAIN-215ENST00000575112 AP1M1Q9BXS5 423 aa9.35□□□□□ -0.91
RPAIN-215ENST00000575112 RTFDC1Q9BY42 306 aaPredicted RBP9.35□□□□□ -0.91
RPAIN-215ENST00000575112 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.35□□□□□ -0.912e-7■■□□□ 11.6
RPAIN-215ENST00000575112 FBXO28Q9NVF7 368 aa9.35□□□□□ -0.91
RPAIN-215ENST00000575112 DNM3Q9UQ16 869 aa9.35□□□□□ -0.91
RPAIN-215ENST00000575112 KCPQ6ZWJ8 1503 aa9.35□□□□□ -0.91
RPAIN-215ENST00000575112 GOLGA8IPA6NC78 632 aa9.35□□□□□ -0.91
RPAIN-215ENST00000575112 DDTLA6NHG4 134 aaPredicted RBP9.35□□□□□ -0.91
RPAIN-215ENST00000575112 GOLGA8JA6NMD2 632 aa9.35□□□□□ -0.91
RPAIN-215ENST00000575112 H0YHG0 523 aa9.35□□□□□ -0.91
RPAIN-215ENST00000575112 H0YIN7 160 aa9.35□□□□□ -0.91
RPAIN-215ENST00000575112 SEMA3EO15041 775 aa9.35□□□□□ -0.91
RPAIN-215ENST00000575112 ALAS1P13196 640 aa9.35□□□□□ -0.91
RPAIN-215ENST00000575112 ECE1P42892 770 aa9.35□□□□□ -0.91
RPAIN-215ENST00000575112 PSMC6P62333 389 aa9.35□□□□□ -0.91
RPAIN-215ENST00000575112 TMEM132AQ24JP5 1023 aa9.35□□□□□ -0.91
RPAIN-215ENST00000575112 PDS5AQ29RF7 1337 aaKnown RBP9.35□□□□□ -0.91
RPAIN-215ENST00000575112 TMED8Q6PL24 325 aaPredicted RBP9.35□□□□□ -0.91
RPAIN-215ENST00000575112 U2AF1L4Q8WU68 220 aaKnown RBP9.35□□□□□ -0.91
RPAIN-215ENST00000575112 ZNF668Q96K58 619 aaPredicted RBP9.35□□□□□ -0.91
RPAIN-215ENST00000575112 TLR10Q9BXR5 811 aa9.35□□□□□ -0.91
RPAIN-215ENST00000575112 PACSIN1Q9BY11 444 aa9.35□□□□□ -0.91
RPAIN-215ENST00000575112 JMJD4Q9H9V9 463 aa9.35□□□□□ -0.91
RPAIN-215ENST00000575112 PDE4DIPQ5VU43 2346 aa9.35□□□□□ -0.91
RPAIN-215ENST00000575112 F5H6K3 240 aa9.35□□□□□ -0.91
RPAIN-215ENST00000575112 KCNK3O14649 394 aa9.35□□□□□ -0.91
RPAIN-215ENST00000575112 CETN3O15182 167 aa9.35□□□□□ -0.91
RPAIN-215ENST00000575112 KLRC3Q07444 240 aa9.35□□□□□ -0.91
RPAIN-215ENST00000575112 DDR1Q08345 913 aa9.35□□□□□ -0.91
RPAIN-215ENST00000575112 MEA1Q16626 185 aa9.35□□□□□ -0.91
RPAIN-215ENST00000575112 FBXO11Q86XK2 927 aa9.35□□□□□ -0.91
RPAIN-215ENST00000575112 SUGP1Q8IWZ8 645 aaKnown RBP9.35□□□□□ -0.91
RPAIN-215ENST00000575112 PYM1Q9BRP8 204 aaKnown RBP9.35□□□□□ -0.91
RPAIN-215ENST00000575112 FGFBP2Q9BYJ0 223 aa9.35□□□□□ -0.91
RPAIN-215ENST00000575112 ZNF277Q9NRM2 450 aaPredicted RBP9.35□□□□□ -0.91
RPAIN-215ENST00000575112 ANAPC4Q9UJX5 808 aa9.35□□□□□ -0.91
RPAIN-215ENST00000575112 PCDHA13Q9Y5I0 950 aa9.35□□□□□ -0.91
RPAIN-215ENST00000575112 CCDC169A6NNP5 214 aa9.34□□□□□ -0.91
RPAIN-215ENST00000575112 SRGNP10124 158 aa9.34□□□□□ -0.91
RPAIN-215ENST00000575112 LSP1P33241 339 aa9.34□□□□□ -0.91
RPAIN-215ENST00000575112 FLT3P36888 993 aa9.34□□□□□ -0.91
RPAIN-215ENST00000575112 TRAPPC10P48553 1259 aa9.34□□□□□ -0.91
RPAIN-215ENST00000575112 KIF11P52732 1056 aa9.34□□□□□ -0.91
RPAIN-215ENST00000575112 NBPF9Q3BBW0 867 aa9.34□□□□□ -0.91
RPAIN-215ENST00000575112 KRT27Q7Z3Y8 459 aa9.34□□□□□ -0.91
RPAIN-215ENST00000575112 CERS5Q8N5B7 392 aa9.34□□□□□ -0.91
RPAIN-215ENST00000575112 MRRFQ96E11 262 aaKnown RBP9.34□□□□□ -0.91
RPAIN-215ENST00000575112 FAM84AQ96KN4 292 aa9.34□□□□□ -0.91
RPAIN-215ENST00000575112 DPH5Q9H2P9 285 aa9.34□□□□□ -0.91
RPAIN-215ENST00000575112 YY1AP1Q9H869 796 aa9.34□□□□□ -0.91
RPAIN-215ENST00000575112 SLIT2O94813 1529 aa9.34□□□□□ -0.91
RPAIN-215ENST00000575112 BBOX1O75936 387 aa9.34□□□□□ -0.91
RPAIN-215ENST00000575112 DGKZQ13574 1117 aa9.34□□□□□ -0.91
RPAIN-215ENST00000575112 ZC2HC1CQ53FD0 456 aaPredicted RBP9.34□□□□□ -0.91
RPAIN-215ENST00000575112 CCDC25Q86WR0 208 aa9.34□□□□□ -0.91
RPAIN-215ENST00000575112 TAB3Q8N5C8 712 aaPredicted RBP9.34□□□□□ -0.91
RPAIN-215ENST00000575112 SEMA6BQ9H3T3 888 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms